RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
SRPK1-202ENST00000361690 FLT4P35916 1363 aa13.05□□□□□ -0.32
SRPK1-202ENST00000361690 SBNO1A3KN83 1393 aa13.05□□□□□ -0.32
SRPK1-202ENST00000361690 CALD1Q05682 793 aaKnown RBP13.05□□□□□ -0.32
SRPK1-202ENST00000361690 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
SRPK1-202ENST00000361690 MSH6P52701 1360 aa13.04□□□□□ -0.32
SRPK1-202ENST00000361690 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
SRPK1-202ENST00000361690 LAS1LQ9Y4W2 734 aaKnown RBP13.04□□□□□ -0.32
SRPK1-202ENST00000361690 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
SRPK1-202ENST00000361690 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
SRPK1-202ENST00000361690 PHACTR3Q96KR7 559 aa13.03□□□□□ -0.32
SRPK1-202ENST00000361690 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
SRPK1-202ENST00000361690 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.32
SRPK1-202ENST00000361690 C1orf167Q5SNV9 1468 aa13.02□□□□□ -0.33
SRPK1-202ENST00000361690 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.33
SRPK1-202ENST00000361690 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
SRPK1-202ENST00000361690 IL16Q14005 1332 aa13.01□□□□□ -0.33
SRPK1-202ENST00000361690 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
SRPK1-202ENST00000361690 NCOA3Q9Y6Q9 1424 aa13.01□□□□□ -0.33
SRPK1-202ENST00000361690 TSR2Q969E8 191 aaKnown RBP13□□□□□ -0.33
SRPK1-202ENST00000361690 HOXC9P31274 260 aa13□□□□□ -0.33
SRPK1-202ENST00000361690 BCAR3O75815 825 aa12.99□□□□□ -0.33
SRPK1-202ENST00000361690 CRBNQ96SW2 442 aa12.99□□□□□ -0.33
SRPK1-202ENST00000361690 KIF24Q5T7B8 1368 aa12.99□□□□□ -0.33
SRPK1-202ENST00000361690 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
SRPK1-202ENST00000361690 FRAT1Q92837 279 aaPredicted RBP12.99□□□□□ -0.33
SRPK1-202ENST00000361690 PIK3C2AO00443 1686 aa12.99□□□□□ -0.33
SRPK1-202ENST00000361690 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
SRPK1-202ENST00000361690 DCCP43146 1447 aa12.98□□□□□ -0.33
SRPK1-202ENST00000361690 NPHP3Q7Z494 1330 aa12.98□□□□□ -0.33
SRPK1-202ENST00000361690 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
SRPK1-202ENST00000361690 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
SRPK1-202ENST00000361690 GNAI1P63096 354 aa12.98□□□□□ -0.33
SRPK1-202ENST00000361690 EYA1Q99502 592 aa12.98□□□□□ -0.33
SRPK1-202ENST00000361690 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
SRPK1-202ENST00000361690 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
SRPK1-202ENST00000361690 GCP02774 474 aa12.97□□□□□ -0.33
SRPK1-202ENST00000361690 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
SRPK1-202ENST00000361690 IP6K1Q92551 441 aa12.97□□□□□ -0.33
SRPK1-202ENST00000361690 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.33
SRPK1-202ENST00000361690 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.33
SRPK1-202ENST00000361690 MST1RQ04912 1400 aa12.96□□□□□ -0.33
SRPK1-202ENST00000361690 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.33
SRPK1-202ENST00000361690 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
SRPK1-202ENST00000361690 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
SRPK1-202ENST00000361690 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
SRPK1-202ENST00000361690 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
SRPK1-202ENST00000361690 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
SRPK1-202ENST00000361690 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
SRPK1-202ENST00000361690 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
SRPK1-202ENST00000361690 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
SRPK1-202ENST00000361690 FAM83GA6ND36 823 aa12.93□□□□□ -0.34
SRPK1-202ENST00000361690 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
SRPK1-202ENST00000361690 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
SRPK1-202ENST00000361690 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
SRPK1-202ENST00000361690 MS4A1P11836 297 aa12.92□□□□□ -0.34
SRPK1-202ENST00000361690 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
SRPK1-202ENST00000361690 SLAIN2Q9P270 581 aa12.92□□□□□ -0.34
SRPK1-202ENST00000361690 USHBP1Q8N6Y0 703 aa12.92□□□□□ -0.34
SRPK1-202ENST00000361690 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
SRPK1-202ENST00000361690 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
SRPK1-202ENST00000361690 MTHFSDQ2M296 383 aaKnown RBP12.91□□□□□ -0.34
SRPK1-202ENST00000361690 MCM10Q7L590 875 aa12.91□□□□□ -0.34
SRPK1-202ENST00000361690 FTSJ3Q8IY81 847 aaKnown RBP12.91□□□□□ -0.34
SRPK1-202ENST00000361690 ZKSCAN2Q63HK3 967 aa12.91□□□□□ -0.34
SRPK1-202ENST00000361690 STRCP1A6NGW2 1772 aa12.91□□□□□ -0.34
SRPK1-202ENST00000361690 ELL2O00472 640 aaPredicted RBP12.9□□□□□ -0.34
SRPK1-202ENST00000361690 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
SRPK1-202ENST00000361690 USP19O94966 1318 aa12.9□□□□□ -0.34
SRPK1-202ENST00000361690 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
SRPK1-202ENST00000361690 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
SRPK1-202ENST00000361690 KDRP35968 1356 aa12.9□□□□□ -0.34
SRPK1-202ENST00000361690 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
SRPK1-202ENST00000361690 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
SRPK1-202ENST00000361690 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
SRPK1-202ENST00000361690 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
SRPK1-202ENST00000361690 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
SRPK1-202ENST00000361690 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
SRPK1-202ENST00000361690 STRCQ7RTU9 1775 aa12.89□□□□□ -0.35
SRPK1-202ENST00000361690 CSB-PGBD3P0DP91 1061 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
SRPK1-202ENST00000361690 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
SRPK1-202ENST00000361690 NFAT5O94916 1531 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 ZNF853P0CG23 659 aa12.88□□□□□ -0.35
SRPK1-202ENST00000361690 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
SRPK1-202ENST00000361690 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
SRPK1-202ENST00000361690 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
SRPK1-202ENST00000361690 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
SRPK1-202ENST00000361690 DZIP1LQ8IYY4 767 aaKnown RBP12.87□□□□□ -0.35
SRPK1-202ENST00000361690 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
SRPK1-202ENST00000361690 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
SRPK1-202ENST00000361690 TSPYL4Q9UJ04 414 aa12.86□□□□□ -0.35
SRPK1-202ENST00000361690 NLRP2Q9NX02 1062 aa12.86□□□□□ -0.35
SRPK1-202ENST00000361690 SLIT3O75094 1523 aa12.85□□□□□ -0.35
SRPK1-202ENST00000361690 NOB1Q9ULX3 412 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms