RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 ZNF692Q9BU19 519 aaPredicted RBP21.57■■□□□ 1.04
GDPD3-201ENST00000360688 CPSF1Q10570 1443 aaKnown RBP21.57■■□□□ 1.04
GDPD3-201ENST00000360688 NBPF14Q5TI25 921 aa21.56■■□□□ 1.04
GDPD3-201ENST00000360688 WDR17Q8IZU2 1322 aa21.56■■□□□ 1.04
GDPD3-201ENST00000360688 DDB1Q16531 1140 aa21.55■■□□□ 1.04
GDPD3-201ENST00000360688 ARHGEF25Q86VW2 580 aa21.55■■□□□ 1.04
GDPD3-201ENST00000360688 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
GDPD3-201ENST00000360688 RGPD3A6NKT7 1758 aaPredicted RBP21.54■■□□□ 1.04
GDPD3-201ENST00000360688 RGPD4Q7Z3J3 1758 aa21.54■■□□□ 1.04
GDPD3-201ENST00000360688 TTC21AQ8NDW8 1320 aa21.54■■□□□ 1.04
GDPD3-201ENST00000360688 SOX12O15370 315 aa21.52■■□□□ 1.03
GDPD3-201ENST00000360688 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.03
GDPD3-201ENST00000360688 NFAT5O94916 1531 aa21.51■■□□□ 1.03
GDPD3-201ENST00000360688 PLSCR1O15162 318 aa21.51■■□□□ 1.03
GDPD3-201ENST00000360688 KTN1Q86UP2 1357 aaKnown RBP21.5■■□□□ 1.03
GDPD3-201ENST00000360688 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
GDPD3-201ENST00000360688 PTF1AQ7RTS3 328 aa21.49■■□□□ 1.03
GDPD3-201ENST00000360688 MARCH10Q8NA82 808 aaPredicted RBP21.49■■□□□ 1.03
GDPD3-201ENST00000360688 CARD10Q9BWT7 1032 aa21.49■■□□□ 1.03
GDPD3-201ENST00000360688 BCL11BQ9C0K0 894 aaPredicted RBP21.48■■□□□ 1.03
GDPD3-201ENST00000360688 SBNO2Q9Y2G9 1366 aa21.48■■□□□ 1.03
GDPD3-201ENST00000360688 BCL9O00512 1426 aa21.47■■□□□ 1.03
GDPD3-201ENST00000360688 CSB-PGBD3P0DP91 1061 aa21.47■■□□□ 1.03
GDPD3-201ENST00000360688 ABCC6O95255 1503 aa21.46■■□□□ 1.03
GDPD3-201ENST00000360688 USP54Q70EL1 1684 aa21.45■■□□□ 1.02
GDPD3-201ENST00000360688 SPON1Q9HCB6 807 aa21.45■■□□□ 1.02
GDPD3-201ENST00000360688 USP31Q70CQ4 1352 aa21.44■■□□□ 1.02
GDPD3-201ENST00000360688 KCNQ2O43526 872 aa21.44■■□□□ 1.02
GDPD3-201ENST00000360688 CD163L1Q9NR16 1453 aa21.44■■□□□ 1.02
GDPD3-201ENST00000360688 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
GDPD3-201ENST00000360688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.43■■□□□ 1.02
GDPD3-201ENST00000360688 ANO8Q9HCE9 1232 aaPredicted RBP21.43■■□□□ 1.02
GDPD3-201ENST00000360688 LTN1O94822 1766 aa21.43■■□□□ 1.02
GDPD3-201ENST00000360688 CASZ1Q86V15 1759 aa21.42■■□□□ 1.02
GDPD3-201ENST00000360688 EXOC5O00471 708 aa21.42■■□□□ 1.02
GDPD3-201ENST00000360688 PROM2Q8N271 834 aa21.42■■□□□ 1.02
GDPD3-201ENST00000360688 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
GDPD3-201ENST00000360688 NME9Q86XW9 330 aa21.4■■□□□ 1.02
GDPD3-201ENST00000360688 PPP1R1BQ9UD71 204 aaPredicted RBP21.4■■□□□ 1.02
GDPD3-201ENST00000360688 TNS2Q63HR2 1409 aa21.4■■□□□ 1.02
GDPD3-201ENST00000360688 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
GDPD3-201ENST00000360688 SLC12A5Q9H2X9 1139 aa21.38■■□□□ 1.01
GDPD3-201ENST00000360688 ERBB3P21860 1342 aa21.38■■□□□ 1.01
GDPD3-201ENST00000360688 TXNRD1Q16881 649 aa21.36■■□□□ 1.01
GDPD3-201ENST00000360688 HDGFL2Q7Z4V5 671 aaPredicted RBP21.36■■□□□ 1.01
GDPD3-201ENST00000360688 PDGFDQ9GZP0 370 aaPredicted RBP21.36■■□□□ 1.01
GDPD3-201ENST00000360688 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
GDPD3-201ENST00000360688 NHSQ6T4R5 1651 aa21.36■■□□□ 1.01
GDPD3-201ENST00000360688 NLRP2Q9NX02 1062 aa21.35■■□□□ 1.01
GDPD3-201ENST00000360688 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
GDPD3-201ENST00000360688 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
GDPD3-201ENST00000360688 A0A1W2PP64 1363 aa21.33■■□□□ 1
GDPD3-201ENST00000360688 TONSLQ96HA7 1378 aa21.33■■□□□ 1
GDPD3-201ENST00000360688 TERF2IPQ9NYB0 399 aa21.32■■□□□ 1
GDPD3-201ENST00000360688 IL2RBP14784 551 aa21.31■■□□□ 1
GDPD3-201ENST00000360688 ANKRD24Q8TF21 1146 aa21.31■■□□□ 1
GDPD3-201ENST00000360688 PUS7Q96PZ0 661 aaKnown RBP21.31■■□□□ 1
GDPD3-201ENST00000360688 STK32BQ9NY57 414 aa21.31■■□□□ 1
GDPD3-201ENST00000360688 ZBTB7AO95365 584 aa21.3■■□□□ 1
GDPD3-201ENST00000360688 SLC15A2Q16348 729 aa21.3■■□□□ 1
GDPD3-201ENST00000360688 ACSBG1Q96GR2 724 aa21.3■■□□□ 1
GDPD3-201ENST00000360688 BTAF1O14981 1849 aa21.3■■□□□ 1
GDPD3-201ENST00000360688 YY1P25490 414 aa21.29■■□□□ 1
GDPD3-201ENST00000360688 MYOM1P52179 1685 aa21.29■■□□□ 1
GDPD3-201ENST00000360688 PTGER2P43116 358 aa21.28■■□□□ 1
GDPD3-201ENST00000360688 ATF5Q9Y2D1 282 aaPredicted RBP21.28■■□□□ 1
GDPD3-201ENST00000360688 DCAF8L1A6NGE4 600 aa21.27■□□□□ 0.99
GDPD3-201ENST00000360688 TESK2Q96S53 571 aa21.27■□□□□ 0.99
GDPD3-201ENST00000360688 FAM208AQ9UK61 1670 aaKnown RBP21.26■□□□□ 0.99
GDPD3-201ENST00000360688 IP6K1Q92551 441 aa21.26■□□□□ 0.99
GDPD3-201ENST00000360688 PAPPAQ13219 1627 aa21.25■□□□□ 0.99
GDPD3-201ENST00000360688 ST20-MTHFSA0A0A6YYL1 179 aa21.24■□□□□ 0.99
GDPD3-201ENST00000360688 MTFR1LQ9H019 292 aa21.23■□□□□ 0.99
GDPD3-201ENST00000360688 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
GDPD3-201ENST00000360688 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
GDPD3-201ENST00000360688 SGIP1Q9BQI5 828 aa21.21■□□□□ 0.99
GDPD3-201ENST00000360688 COG3Q96JB2 828 aa21.2■□□□□ 0.98
GDPD3-201ENST00000360688 MAP3K19Q56UN5 1328 aa21.2■□□□□ 0.98
GDPD3-201ENST00000360688 HOXC9P31274 260 aa21.19■□□□□ 0.98
GDPD3-201ENST00000360688 DDX54Q8TDD1 881 aaKnown RBP21.19■□□□□ 0.98
GDPD3-201ENST00000360688 LRRC4BQ9NT99 713 aa21.19■□□□□ 0.98
GDPD3-201ENST00000360688 SLC24A1O60721 1099 aa21.18■□□□□ 0.98
GDPD3-201ENST00000360688 FBLN1P23142 703 aa21.18■□□□□ 0.98
GDPD3-201ENST00000360688 ZNF827Q17R98 1081 aa21.18■□□□□ 0.98
GDPD3-201ENST00000360688 FHDC1Q9C0D6 1143 aaPredicted RBP21.18■□□□□ 0.98
GDPD3-201ENST00000360688 UTRNP46939 3433 aa21.17■□□□□ 0.98
GDPD3-201ENST00000360688 SYT17Q9BSW7 474 aa21.17■□□□□ 0.98
GDPD3-201ENST00000360688 SHANK3Q9BYB0 1731 aa21.17■□□□□ 0.98
GDPD3-201ENST00000360688 AMPHP49418 695 aa21.16■□□□□ 0.98
GDPD3-201ENST00000360688 ANKRD36BQ8N2N9 1353 aa21.16■□□□□ 0.98
GDPD3-201ENST00000360688 QSER1Q2KHR3 1735 aa21.15■□□□□ 0.98
GDPD3-201ENST00000360688 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
GDPD3-201ENST00000360688 AKT1S1Q96B36 256 aa21.13■□□□□ 0.97
GDPD3-201ENST00000360688 ARXQ96QS3 562 aa21.13■□□□□ 0.97
GDPD3-201ENST00000360688 SLC27A3Q5K4L6 730 aa21.12■□□□□ 0.97
GDPD3-201ENST00000360688 MEGF6O75095 1541 aa21.12■□□□□ 0.97
GDPD3-201ENST00000360688 LY75O60449 1722 aa21.12■□□□□ 0.97
GDPD3-201ENST00000360688 TUBGCP6Q96RT7 1819 aa21.12■□□□□ 0.97
GDPD3-201ENST00000360688 CHD4Q14839 1912 aa21.12■□□□□ 0.97
GDPD3-201ENST00000360688 PRIM1P49642 420 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms