RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 HSP90AB2PQ58FF8 381 aa27.63■■■□□ 2.01
MAP1LC3A-201ENST00000360668 RSPH6AQ9H0K4 717 aa27.63■■■□□ 2.01
MAP1LC3A-201ENST00000360668 MAPK8IP3Q9UPT6 1336 aa27.61■■■□□ 2.01
MAP1LC3A-201ENST00000360668 CCDC27Q2M243 656 aa27.61■■■□□ 2.01
MAP1LC3A-201ENST00000360668 GOLGA2Q08379 1002 aa27.6■■■□□ 2.01
MAP1LC3A-201ENST00000360668 LTN1O94822 1766 aa27.6■■■□□ 2.01
MAP1LC3A-201ENST00000360668 PHRF1Q9P1Y6 1649 aaKnown RBP27.6■■■□□ 2.01
MAP1LC3A-201ENST00000360668 CDCA7LQ96GN5 454 aa27.6■■■□□ 2.01
MAP1LC3A-201ENST00000360668 PHF23Q9BUL5 403 aaPredicted RBP27.6■■■□□ 2.01
MAP1LC3A-201ENST00000360668 RGPD1P0DJD0 1748 aa27.6■■■□□ 2.01
MAP1LC3A-201ENST00000360668 TNS3Q68CZ2 1445 aa27.59■■■□□ 2.01
MAP1LC3A-201ENST00000360668 LMOD2Q6P5Q4 547 aa27.59■■■□□ 2.01
MAP1LC3A-201ENST00000360668 DDX17Q92841 729 aaKnown RBP27.59■■■□□ 2.01
MAP1LC3A-201ENST00000360668 HOXC9P31274 260 aa27.58■■■□□ 2.01
MAP1LC3A-201ENST00000360668 PRKAR2BP31323 418 aa27.57■■■□□ 2
MAP1LC3A-201ENST00000360668 WWC1Q8IX03 1113 aa27.57■■■□□ 2
MAP1LC3A-201ENST00000360668 GCP02774 474 aa27.56■■■□□ 2
MAP1LC3A-201ENST00000360668 NEFMP07197 916 aa27.56■■■□□ 2
MAP1LC3A-201ENST00000360668 HMOX1P09601 288 aa27.56■■■□□ 2
MAP1LC3A-201ENST00000360668 RRP7AQ9Y3A4 280 aaKnown RBP27.56■■■□□ 2
MAP1LC3A-201ENST00000360668 ARHGEF10O15013 1369 aa27.55■■■□□ 2
MAP1LC3A-201ENST00000360668 TMPOP42166 694 aaKnown RBP27.55■■■□□ 2
MAP1LC3A-201ENST00000360668 SUPT16HQ9Y5B9 1047 aaKnown RBP27.55■■■□□ 2
MAP1LC3A-201ENST00000360668 SPATA31A3Q5VYP0 1347 aa27.54■■■□□ 2
MAP1LC3A-201ENST00000360668 IP6K1Q92551 441 aa27.54■■■□□ 2
MAP1LC3A-201ENST00000360668 SLFN5Q08AF3 891 aa27.53■■■□□ 2
MAP1LC3A-201ENST00000360668 NEUROD2Q15784 382 aa27.53■■■□□ 2
MAP1LC3A-201ENST00000360668 MED1Q15648 1581 aaPredicted RBP27.53■■■□□ 2
MAP1LC3A-201ENST00000360668 SOS2Q07890 1332 aaPredicted RBP27.53■■■□□ 2
MAP1LC3A-201ENST00000360668 WDR63Q8IWG1 891 aa27.52■■■□□ 2
MAP1LC3A-201ENST00000360668 E9PSI1 815 aa27.52■■■□□ 2
MAP1LC3A-201ENST00000360668 ARHGEF25Q86VW2 580 aa27.52■■■□□ 2
MAP1LC3A-201ENST00000360668 TRMT2AQ8IZ69 625 aaKnown RBP27.52■■■□□ 2
MAP1LC3A-201ENST00000360668 NHSL1Q5SYE7 1610 aa27.51■■□□□ 1.99
MAP1LC3A-201ENST00000360668 NEFLP07196 543 aa27.5■■□□□ 1.99
MAP1LC3A-201ENST00000360668 DUSP27Q5VZP5 1158 aa27.5■■□□□ 1.99
MAP1LC3A-201ENST00000360668 SULT6B1Q6IMI4 303 aa27.49■■□□□ 1.99
MAP1LC3A-201ENST00000360668 IGSF1Q8N6C5 1336 aa27.49■■□□□ 1.99
MAP1LC3A-201ENST00000360668 CRYBG1Q9Y4K1 1723 aa27.47■■□□□ 1.99
MAP1LC3A-201ENST00000360668 RIPK4P57078 832 aa27.47■■□□□ 1.99
MAP1LC3A-201ENST00000360668 NFE2L2Q16236 605 aa27.47■■□□□ 1.99
MAP1LC3A-201ENST00000360668 PHACTR3Q96KR7 559 aa27.47■■□□□ 1.99
MAP1LC3A-201ENST00000360668 KDRP35968 1356 aa27.47■■□□□ 1.99
MAP1LC3A-201ENST00000360668 AEBP1Q8IUX7 1158 aa27.46■■□□□ 1.99
MAP1LC3A-201ENST00000360668 EYA1Q99502 592 aa27.46■■□□□ 1.99
MAP1LC3A-201ENST00000360668 TRIM35Q9UPQ4 493 aa27.46■■□□□ 1.99
MAP1LC3A-201ENST00000360668 SPINK5Q9NQ38 1064 aaPredicted RBP27.45■■□□□ 1.99
MAP1LC3A-201ENST00000360668 PHLPP1O60346 1717 aa27.45■■□□□ 1.98
MAP1LC3A-201ENST00000360668 AHDC1Q5TGY3 1603 aaPredicted RBP27.45■■□□□ 1.98
MAP1LC3A-201ENST00000360668 RNF123Q5XPI4 1314 aa27.44■■□□□ 1.98
MAP1LC3A-201ENST00000360668 RCAN3Q9UKA8 241 aa27.43■■□□□ 1.98
MAP1LC3A-201ENST00000360668 COL16A1Q07092 1604 aaPredicted RBP27.42■■□□□ 1.98
MAP1LC3A-201ENST00000360668 JCADQ9P266 1359 aa27.41■■□□□ 1.98
MAP1LC3A-201ENST00000360668 ZBTB7CA1YPR0 619 aa27.41■■□□□ 1.98
MAP1LC3A-201ENST00000360668 IL16Q14005 1332 aa27.4■■□□□ 1.98
MAP1LC3A-201ENST00000360668 ABCC6O95255 1503 aa27.4■■□□□ 1.98
MAP1LC3A-201ENST00000360668 PLEKHG5O94827 1062 aa27.4■■□□□ 1.98
MAP1LC3A-201ENST00000360668 FKBP8Q14318 412 aa27.39■■□□□ 1.98
MAP1LC3A-201ENST00000360668 ERICH6BQ5W0A0 696 aa27.39■■□□□ 1.98
MAP1LC3A-201ENST00000360668 LTV1Q96GA3 475 aaPredicted RBP27.39■■□□□ 1.98
MAP1LC3A-201ENST00000360668 LMOD3Q0VAK6 560 aa27.38■■□□□ 1.97
MAP1LC3A-201ENST00000360668 ILDR2Q71H61 639 aa27.38■■□□□ 1.97
MAP1LC3A-201ENST00000360668 DLG5Q8TDM6 1919 aa27.37■■□□□ 1.97
MAP1LC3A-201ENST00000360668 ZC3H6P61129 1189 aaKnown RBP27.37■■□□□ 1.97
MAP1LC3A-201ENST00000360668 MYH16Q9H6N6 1097 aa27.37■■□□□ 1.97
MAP1LC3A-201ENST00000360668 CPDO75976 1380 aa27.37■■□□□ 1.97
MAP1LC3A-201ENST00000360668 CABLES1Q8TDN4 633 aa27.35■■□□□ 1.97
MAP1LC3A-201ENST00000360668 COL18A1P39060 1754 aa27.35■■□□□ 1.97
MAP1LC3A-201ENST00000360668 CALD1Q05682 793 aaKnown RBP27.34■■□□□ 1.97
MAP1LC3A-201ENST00000360668 ANKRD24Q8TF21 1146 aa27.33■■□□□ 1.97
MAP1LC3A-201ENST00000360668 AXIN2Q9Y2T1 843 aa27.33■■□□□ 1.97
MAP1LC3A-201ENST00000360668 NCAPD2Q15021 1401 aa27.33■■□□□ 1.97
MAP1LC3A-201ENST00000360668 CAMTA1Q9Y6Y1 1673 aa27.32■■□□□ 1.96
MAP1LC3A-201ENST00000360668 LRRC59Q96AG4 307 aaKnown RBP27.32■■□□□ 1.96
MAP1LC3A-201ENST00000360668 ABCA3Q99758 1704 aa27.32■■□□□ 1.96
MAP1LC3A-201ENST00000360668 RGPD5Q99666 1765 aa27.32■■□□□ 1.96
MAP1LC3A-201ENST00000360668 NBPF6Q5VWK0 638 aa27.31■■□□□ 1.96
MAP1LC3A-201ENST00000360668 NBPF4Q96M43 638 aa27.31■■□□□ 1.96
MAP1LC3A-201ENST00000360668 RGPD2P0DJD1 1756 aa27.3■■□□□ 1.96
MAP1LC3A-201ENST00000360668 SPATA31A6Q5VVP1 1343 aa27.3■■□□□ 1.96
MAP1LC3A-201ENST00000360668 KIAA0232Q92628 1395 aa27.29■■□□□ 1.96
MAP1LC3A-201ENST00000360668 RRP1P56182 461 aaKnown RBP27.29■■□□□ 1.96
MAP1LC3A-201ENST00000360668 GAS2L2Q8NHY3 880 aa27.29■■□□□ 1.96
MAP1LC3A-201ENST00000360668 ERBB3P21860 1342 aa27.29■■□□□ 1.96
MAP1LC3A-201ENST00000360668 LMO7Q8WWI1 1683 aa27.27■■□□□ 1.96
MAP1LC3A-201ENST00000360668 MTHFSDQ2M296 383 aaKnown RBP27.26■■□□□ 1.96
MAP1LC3A-201ENST00000360668 USHBP1Q8N6Y0 703 aa27.26■■□□□ 1.96
MAP1LC3A-201ENST00000360668 FANCIQ9NVI1 1328 aa27.26■■□□□ 1.96
MAP1LC3A-201ENST00000360668 RGS17Q9UGC6 210 aaPredicted RBP27.26■■□□□ 1.95
MAP1LC3A-201ENST00000360668 FAM208AQ9UK61 1670 aaKnown RBP27.25■■□□□ 1.95
MAP1LC3A-201ENST00000360668 IRX6P78412 446 aaPredicted RBP27.24■■□□□ 1.95
MAP1LC3A-201ENST00000360668 IFT57Q9NWB7 429 aa27.24■■□□□ 1.95
MAP1LC3A-201ENST00000360668 HAP1P54257 671 aaPredicted RBP27.23■■□□□ 1.95
MAP1LC3A-201ENST00000360668 HTATSF1O43719 755 aaKnown RBP27.22■■□□□ 1.95
MAP1LC3A-201ENST00000360668 CT47B1P0C2W7 299 aaPredicted RBP27.22■■□□□ 1.95
MAP1LC3A-201ENST00000360668 CHRNA2Q15822 529 aa27.22■■□□□ 1.95
MAP1LC3A-201ENST00000360668 COL22A1Q8NFW1 1626 aaPredicted RBP27.22■■□□□ 1.95
MAP1LC3A-201ENST00000360668 GNAI1P63096 354 aa27.22■■□□□ 1.95
MAP1LC3A-201ENST00000360668 TSR2Q969E8 191 aaKnown RBP27.22■■□□□ 1.95
MAP1LC3A-201ENST00000360668 THUMPD2Q9BTF0 503 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms