RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 KRT32Q14532 448 aa11.41□□□□□ -0.58
CUX1-203ENST00000360264 SERPINC1P01008 464 aa11.41□□□□□ -0.58
CUX1-203ENST00000360264 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
CUX1-203ENST00000360264 HDGFL1Q5TGJ6 251 aa11.41□□□□□ -0.58
CUX1-203ENST00000360264 TANGO6Q9C0B7 1094 aa11.41□□□□□ -0.58
CUX1-203ENST00000360264 WDR33Q9C0J8 1336 aaKnown RBP11.41□□□□□ -0.58
CUX1-203ENST00000360264 KIF21BO75037 1637 aa11.41□□□□□ -0.58
CUX1-203ENST00000360264 EPB41L2O43491 1005 aaKnown RBP11.41□□□□□ -0.58
CUX1-203ENST00000360264 ESCO1Q5FWF5 840 aa11.41□□□□□ -0.58
CUX1-203ENST00000360264 LNPKQ9C0E8 428 aa11.41□□□□□ -0.58
CUX1-203ENST00000360264 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 HFM1A2PYH4 1435 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 ME1P48163 572 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 CCDC181Q5TID7 509 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 STRN4Q9NRL3 753 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 ERLIN1O75477 346 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 SLF2Q8IX21 1173 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 CETN2P41208 172 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 IGHMBP2P38935 993 aaKnown RBP11.4□□□□□ -0.58
CUX1-203ENST00000360264 PPP4R3AQ6IN85 833 aa11.4□□□□□ -0.58
CUX1-203ENST00000360264 FGFR1OPO95684 399 aaKnown RBP11.4□□□□□ -0.59
CUX1-203ENST00000360264 CABP4P57796 275 aa11.4□□□□□ -0.59
CUX1-203ENST00000360264 MTHFSP49914 203 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 ZSCAN31Q96LW9 406 aaPredicted RBP11.39□□□□□ -0.59
CUX1-203ENST00000360264 IMMTQ16891 758 aaKnown RBP11.39□□□□□ -0.59
CUX1-203ENST00000360264 CCDC150Q8NCX0 1101 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 POGZQ7Z3K3 1410 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 CCDC91Q7Z6B0 441 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 ZNF397Q8NF99 534 aaPredicted RBP11.39□□□□□ -0.59
CUX1-203ENST00000360264 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
CUX1-203ENST00000360264 ATP2B2Q01814 1243 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 CCDC112Q8NEF3 446 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 CYP46A1Q9Y6A2 500 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
CUX1-203ENST00000360264 ZNF692Q9BU19 519 aaPredicted RBP11.39□□□□□ -0.59
CUX1-203ENST00000360264 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
CUX1-203ENST00000360264 MATR3P43243 847 aaKnown RBP eCLIP11.38□□□□□ -0.595e-7■■■■□ 22.9
CUX1-203ENST00000360264 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
CUX1-203ENST00000360264 NEK4P51957 841 aa11.38□□□□□ -0.59
CUX1-203ENST00000360264 RBM5P52756 815 aaKnown RBP eCLIP11.38□□□□□ -0.594e-7■■■□□ 19.1
CUX1-203ENST00000360264 AXDND1Q5T1B0 1012 aaPredicted RBP11.38□□□□□ -0.59
CUX1-203ENST00000360264 ZHX3Q9H4I2 956 aa11.38□□□□□ -0.59
CUX1-203ENST00000360264 SLC26A8Q96RN1 970 aa11.38□□□□□ -0.59
CUX1-203ENST00000360264 TNMDQ9H2S6 317 aa11.38□□□□□ -0.59
CUX1-203ENST00000360264 VPS36Q86VN1 386 aa11.38□□□□□ -0.59
CUX1-203ENST00000360264 SLC52A1Q9NWF4 448 aa11.38□□□□□ -0.59
CUX1-203ENST00000360264 TTLL5Q6EMB2 1281 aa11.37□□□□□ -0.59
CUX1-203ENST00000360264 TXNDC2Q86VQ3 553 aa11.37□□□□□ -0.59
CUX1-203ENST00000360264 SEPT11Q9NVA2 429 aaKnown RBP11.37□□□□□ -0.59
CUX1-203ENST00000360264 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
CUX1-203ENST00000360264 RAB34Q9BZG1 259 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 ZNF652Q9Y2D9 606 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 FIBPO43427 364 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 MAP9Q49MG5 647 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 CUL5Q93034 780 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 MCM3P25205 808 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
CUX1-203ENST00000360264 KIF2AO00139 706 aaPredicted RBP11.36□□□□□ -0.59
CUX1-203ENST00000360264 STAMBPO95630 424 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 CEP57L1Q8IYX8 460 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
CUX1-203ENST00000360264 ADAMTS8Q9UP79 889 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 ATAD2Q6PL18 1390 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 THEMISQ8N1K5 641 aaPredicted RBP11.35□□□□□ -0.59
CUX1-203ENST00000360264 ATP2B1P20020 1258 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 ZNF76P36508 570 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 BRPF1P55201 1214 aaPredicted RBP11.35□□□□□ -0.59
CUX1-203ENST00000360264 LRRCC1Q9C099 1032 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 SMTNL1A8MU46 457 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 STARD3NLO95772 234 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 USP8P40818 1118 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 FERMT1Q9BQL6 677 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 PPP1R1BQ9UD71 204 aaPredicted RBP11.35□□□□□ -0.59
CUX1-203ENST00000360264 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 MPHOSPH6Q99547 160 aaKnown RBP11.35□□□□□ -0.59
CUX1-203ENST00000360264 TDO2P48775 406 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 KRT85P78386 507 aa11.35□□□□□ -0.59
CUX1-203ENST00000360264 ANAPC15P60006 121 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 CEP126Q9P2H0 1117 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 MYO9BQ13459 2157 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 SUPT6HQ7KZ85 1726 aaKnown RBP11.34□□□□□ -0.59
CUX1-203ENST00000360264 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 ZNF530Q6P9A1 599 aaPredicted RBP11.34□□□□□ -0.59
CUX1-203ENST00000360264 AACSQ86V21 672 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 CCDC148Q8NFR7 591 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 EHMT1Q9H9B1 1298 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 KIAA1328Q86T90 577 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 ANKRD62A6NC57 917 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 TAF3Q5VWG9 929 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 TAF4BQ92750 862 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
CUX1-203ENST00000360264 CTAGE5O15320 804 aa11.33□□□□□ -0.6
CUX1-203ENST00000360264 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
CUX1-203ENST00000360264 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
CUX1-203ENST00000360264 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
CUX1-203ENST00000360264 CETN1Q12798 172 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms