RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.45
APAF1-203ENST00000359972 UBE4AQ14139 1066 aa17.83■□□□□ 0.44
APAF1-203ENST00000359972 MAP3K11Q16584 847 aa17.83■□□□□ 0.44
APAF1-203ENST00000359972 KRT18P05783 430 aaKnown RBP17.83■□□□□ 0.44
APAF1-203ENST00000359972 CTR9Q6PD62 1173 aa17.83■□□□□ 0.44
APAF1-203ENST00000359972 TXLNBQ8N3L3 684 aa17.83■□□□□ 0.44
APAF1-203ENST00000359972 HSP90AB4PQ58FF6 505 aa17.83■□□□□ 0.44
APAF1-203ENST00000359972 RSPH14Q9UHP6 348 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 USP25Q9UHP3 1055 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 AAMPQ13685 434 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 KIF4BQ2VIQ3 1234 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 CCDC91Q7Z6B0 441 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 TAF4BQ92750 862 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
APAF1-203ENST00000359972 TEFQ10587 303 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 CYP46A1Q9Y6A2 500 aa17.82■□□□□ 0.44
APAF1-203ENST00000359972 VGLL3A8MV65 326 aa17.81■□□□□ 0.44
APAF1-203ENST00000359972 KIF2AO00139 706 aaPredicted RBP17.81■□□□□ 0.44
APAF1-203ENST00000359972 IFFO1Q0D2I5 559 aa17.81■□□□□ 0.44
APAF1-203ENST00000359972 SMTNL1A8MU46 457 aa17.81■□□□□ 0.44
APAF1-203ENST00000359972 BCAR3O75815 825 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 TDO2P48775 406 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 KRI1Q8N9T8 703 aaKnown RBP17.8■□□□□ 0.44
APAF1-203ENST00000359972 KIF5CO60282 957 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 SFPQP23246 707 aaKnown RBP eCLIP17.8■□□□□ 0.44
APAF1-203ENST00000359972 CNTLNQ9NXG0 1405 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 ZSCAN12O43309 604 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 ANKRD30AQ9BXX3 1397 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 UBTFL1P0CB47 393 aaPredicted RBP17.8■□□□□ 0.44
APAF1-203ENST00000359972 C11orf95C9JLR9 678 aaPredicted RBP17.8■□□□□ 0.44
APAF1-203ENST00000359972 BMS1Q14692 1282 aaKnown RBP17.8■□□□□ 0.44
APAF1-203ENST00000359972 COG3Q96JB2 828 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 ZHX3Q9H4I2 956 aa17.8■□□□□ 0.44
APAF1-203ENST00000359972 MICALL1Q8N3F8 863 aa17.79■□□□□ 0.44
APAF1-203ENST00000359972 DNA2P51530 1060 aa17.79■□□□□ 0.44
APAF1-203ENST00000359972 STIM1Q13586 685 aa17.79■□□□□ 0.44
APAF1-203ENST00000359972 KRT222Q8N1A0 295 aa17.79■□□□□ 0.44
APAF1-203ENST00000359972 ZBTB9Q96C00 473 aa17.79■□□□□ 0.44
APAF1-203ENST00000359972 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
APAF1-203ENST00000359972 JMYQ8N9B5 988 aa17.79■□□□□ 0.44
APAF1-203ENST00000359972 SERPINA10Q9UK55 444 aa17.79■□□□□ 0.44
APAF1-203ENST00000359972 TSPYL4Q9UJ04 414 aa17.78■□□□□ 0.44
APAF1-203ENST00000359972 HMOX1P09601 288 aa17.78■□□□□ 0.44
APAF1-203ENST00000359972 ADAMTS8Q9UP79 889 aa17.78■□□□□ 0.44
APAF1-203ENST00000359972 TTC31Q49AM3 519 aaPredicted RBP17.78■□□□□ 0.44
APAF1-203ENST00000359972 SKAP1Q86WV1 359 aa17.78■□□□□ 0.44
APAF1-203ENST00000359972 CCDC175P0C221 793 aa17.77■□□□□ 0.44
APAF1-203ENST00000359972 EIF5P55010 431 aaKnown RBP17.77■□□□□ 0.44
APAF1-203ENST00000359972 CCDC178Q5BJE1 867 aa17.77■□□□□ 0.44
APAF1-203ENST00000359972 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.43
APAF1-203ENST00000359972 ZNF830Q96NB3 372 aaPredicted RBP17.77■□□□□ 0.43
APAF1-203ENST00000359972 MCM3P25205 808 aa17.77■□□□□ 0.43
APAF1-203ENST00000359972 CEP135Q66GS9 1140 aa17.77■□□□□ 0.43
APAF1-203ENST00000359972 SURF6O75683 361 aaKnown RBP17.76■□□□□ 0.43
APAF1-203ENST00000359972 LIG1P18858 919 aa17.76■□□□□ 0.43
APAF1-203ENST00000359972 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
APAF1-203ENST00000359972 TTC5Q8N0Z6 440 aa17.76■□□□□ 0.43
APAF1-203ENST00000359972 NOB1Q9ULX3 412 aaKnown RBP17.76■□□□□ 0.43
APAF1-203ENST00000359972 CCDC7Q96M83 1385 aa17.76■□□□□ 0.43
APAF1-203ENST00000359972 CCDC183Q5T5S1 534 aa17.76■□□□□ 0.43
APAF1-203ENST00000359972 SPATA24Q86W54 205 aa17.76■□□□□ 0.43
APAF1-203ENST00000359972 GTPBP4Q9BZE4 634 aaKnown RBP17.76■□□□□ 0.43
APAF1-203ENST00000359972 ADCY5O95622 1261 aa17.76■□□□□ 0.43
APAF1-203ENST00000359972 C10orf67Q8IYJ2 551 aa17.75■□□□□ 0.43
APAF1-203ENST00000359972 ZSWIM4Q9H7M6 989 aa17.75■□□□□ 0.43
APAF1-203ENST00000359972 GNAI1P63096 354 aa17.75■□□□□ 0.43
APAF1-203ENST00000359972 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
APAF1-203ENST00000359972 TMEM132AQ24JP5 1023 aa17.75■□□□□ 0.43
APAF1-203ENST00000359972 PAF1Q8N7H5 531 aa17.74■□□□□ 0.43
APAF1-203ENST00000359972 GCC1Q96CN9 775 aa17.74■□□□□ 0.43
APAF1-203ENST00000359972 SSFA2P28290 1259 aa17.74■□□□□ 0.43
APAF1-203ENST00000359972 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
APAF1-203ENST00000359972 CEP57Q86XR8 500 aa17.74■□□□□ 0.43
APAF1-203ENST00000359972 CCDC160A6NGH7 325 aa17.74■□□□□ 0.43
APAF1-203ENST00000359972 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
APAF1-203ENST00000359972 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
APAF1-203ENST00000359972 SSR1P43307 286 aaKnown RBP17.73■□□□□ 0.43
APAF1-203ENST00000359972 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
APAF1-203ENST00000359972 MAATS1Q7Z4T9 603 aa17.72■□□□□ 0.43
APAF1-203ENST00000359972 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
APAF1-203ENST00000359972 TNPO1Q92973 898 aaKnown RBP17.72■□□□□ 0.43
APAF1-203ENST00000359972 PRIMPOLQ96LW4 560 aa17.72■□□□□ 0.43
APAF1-203ENST00000359972 TOP1P11387 765 aaKnown RBP17.72■□□□□ 0.43
APAF1-203ENST00000359972 SNW1Q13573 536 aaKnown RBP17.72■□□□□ 0.43
APAF1-203ENST00000359972 ANKRD1Q15327 319 aa17.72■□□□□ 0.43
APAF1-203ENST00000359972 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
APAF1-203ENST00000359972 CPLX3Q8WVH0 158 aa17.72■□□□□ 0.43
APAF1-203ENST00000359972 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
APAF1-203ENST00000359972 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
APAF1-203ENST00000359972 SPA17Q15506 151 aa17.71■□□□□ 0.43
APAF1-203ENST00000359972 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.43
APAF1-203ENST00000359972 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.43
APAF1-203ENST00000359972 MYZAPP0CAP1 466 aa17.71■□□□□ 0.43
APAF1-203ENST00000359972 HNRNPMP52272 730 aaKnown RBP eCLIP17.71■□□□□ 0.43
APAF1-203ENST00000359972 HSPA4P34932 840 aa17.71■□□□□ 0.43
APAF1-203ENST00000359972 CLCN1P35523 988 aa17.71■□□□□ 0.43
APAF1-203ENST00000359972 CKAP2LQ8IYA6 745 aa17.7■□□□□ 0.42
APAF1-203ENST00000359972 JAKMIP1Q96N16 626 aaKnown RBP17.7■□□□□ 0.42
APAF1-203ENST00000359972 IVLP07476 585 aa17.7■□□□□ 0.42
APAF1-203ENST00000359972 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms