RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 CADPS2Q86UW7 1296 aa27.27■■□□□ 1.96
FAM3A-202ENST00000359889 TRIM35Q9UPQ4 493 aa27.27■■□□□ 1.96
FAM3A-202ENST00000359889 CALD1Q05682 793 aaKnown RBP27.27■■□□□ 1.96
FAM3A-202ENST00000359889 FOXO3O43524 673 aa27.26■■□□□ 1.95
FAM3A-202ENST00000359889 LMOD3Q0VAK6 560 aa27.26■■□□□ 1.95
FAM3A-202ENST00000359889 KCNH5Q8NCM2 988 aa27.25■■□□□ 1.95
FAM3A-202ENST00000359889 MSH6P52701 1360 aa27.24■■□□□ 1.95
FAM3A-202ENST00000359889 USP54Q70EL1 1684 aa27.24■■□□□ 1.95
FAM3A-202ENST00000359889 SULT6B1Q6IMI4 303 aa27.23■■□□□ 1.95
FAM3A-202ENST00000359889 PHACTR3Q96KR7 559 aa27.22■■□□□ 1.95
FAM3A-202ENST00000359889 KIF1AQ12756 1690 aa27.22■■□□□ 1.95
FAM3A-202ENST00000359889 ARHGEF10O15013 1369 aa27.22■■□□□ 1.95
FAM3A-202ENST00000359889 KRT28Q7Z3Y7 464 aa27.21■■□□□ 1.95
FAM3A-202ENST00000359889 CT47B1P0C2W7 299 aaPredicted RBP27.21■■□□□ 1.95
FAM3A-202ENST00000359889 RTL1A6NKG5 1358 aa27.2■■□□□ 1.95
FAM3A-202ENST00000359889 PEAK1Q9H792 1746 aa27.2■■□□□ 1.94
FAM3A-202ENST00000359889 PLIN1O60240 522 aa27.2■■□□□ 1.94
FAM3A-202ENST00000359889 MST1RQ04912 1400 aa27.19■■□□□ 1.94
FAM3A-202ENST00000359889 CCDC136Q96JN2 1154 aa27.19■■□□□ 1.94
FAM3A-202ENST00000359889 HOXC9P31274 260 aa27.19■■□□□ 1.94
FAM3A-202ENST00000359889 B4GALNT3Q6L9W6 998 aa27.19■■□□□ 1.94
FAM3A-202ENST00000359889 EXOC6Q8TAG9 804 aa27.16■■□□□ 1.94
FAM3A-202ENST00000359889 FANCIQ9NVI1 1328 aa27.16■■□□□ 1.94
FAM3A-202ENST00000359889 STRCP1A6NGW2 1772 aa27.16■■□□□ 1.94
FAM3A-202ENST00000359889 XPCQ01831 940 aaPredicted RBP27.16■■□□□ 1.94
FAM3A-202ENST00000359889 LMOD2Q6P5Q4 547 aa27.15■■□□□ 1.94
FAM3A-202ENST00000359889 AEBP1Q8IUX7 1158 aa27.15■■□□□ 1.94
FAM3A-202ENST00000359889 STRCQ7RTU9 1775 aa27.13■■□□□ 1.93
FAM3A-202ENST00000359889 CANXP27824 592 aaKnown RBP27.13■■□□□ 1.93
FAM3A-202ENST00000359889 IP6K1Q92551 441 aa27.13■■□□□ 1.93
FAM3A-202ENST00000359889 NPHP3Q7Z494 1330 aa27.12■■□□□ 1.93
FAM3A-202ENST00000359889 IGSF1Q8N6C5 1336 aa27.12■■□□□ 1.93
FAM3A-202ENST00000359889 BCAR3O75815 825 aa27.11■■□□□ 1.93
FAM3A-202ENST00000359889 RARSP54136 660 aaKnown RBP27.11■■□□□ 1.93
FAM3A-202ENST00000359889 TSR2Q969E8 191 aaKnown RBP27.11■■□□□ 1.93
FAM3A-202ENST00000359889 EYA1Q99502 592 aa27.11■■□□□ 1.93
FAM3A-202ENST00000359889 MARF1Q9Y4F3 1742 aaKnown RBP27.11■■□□□ 1.93
FAM3A-202ENST00000359889 GNAI1P63096 354 aa27.1■■□□□ 1.93
FAM3A-202ENST00000359889 CRBNQ96SW2 442 aa27.1■■□□□ 1.93
FAM3A-202ENST00000359889 GCP02774 474 aa27.1■■□□□ 1.93
FAM3A-202ENST00000359889 IFT57Q9NWB7 429 aa27.1■■□□□ 1.93
FAM3A-202ENST00000359889 KDRP35968 1356 aa27.09■■□□□ 1.93
FAM3A-202ENST00000359889 RGPD1P0DJD0 1748 aa27.09■■□□□ 1.93
FAM3A-202ENST00000359889 NFAT5O94916 1531 aa27.09■■□□□ 1.93
FAM3A-202ENST00000359889 EXOSC9Q06265 439 aaKnown RBP27.08■■□□□ 1.93
FAM3A-202ENST00000359889 USP19O94966 1318 aa27.08■■□□□ 1.93
FAM3A-202ENST00000359889 ZNF335Q9H4Z2 1342 aaPredicted RBP27.08■■□□□ 1.93
FAM3A-202ENST00000359889 PDE3AQ14432 1141 aa27.07■■□□□ 1.92
FAM3A-202ENST00000359889 LAS1LQ9Y4W2 734 aaKnown RBP27.07■■□□□ 1.92
FAM3A-202ENST00000359889 SLIT3O75094 1523 aa27.05■■□□□ 1.92
FAM3A-202ENST00000359889 ZBTB7CA1YPR0 619 aa27.05■■□□□ 1.92
FAM3A-202ENST00000359889 GAS2L2Q8NHY3 880 aa27.05■■□□□ 1.92
FAM3A-202ENST00000359889 LTV1Q96GA3 475 aaPredicted RBP27.05■■□□□ 1.92
FAM3A-202ENST00000359889 C20orf194Q5TEA3 1177 aa27.04■■□□□ 1.92
FAM3A-202ENST00000359889 TRPM3Q9HCF6 1732 aaPredicted RBP27.04■■□□□ 1.92
FAM3A-202ENST00000359889 ARHGEF25Q86VW2 580 aa27.03■■□□□ 1.92
FAM3A-202ENST00000359889 ZNF428Q96B54 188 aa27.03■■□□□ 1.92
FAM3A-202ENST00000359889 CFAP44Q96MT7 982 aa27.02■■□□□ 1.92
FAM3A-202ENST00000359889 RTF1Q92541 710 aaKnown RBP27.02■■□□□ 1.92
FAM3A-202ENST00000359889 FRAT1Q92837 279 aaPredicted RBP27.02■■□□□ 1.92
FAM3A-202ENST00000359889 THUMPD2Q9BTF0 503 aaKnown RBP27.02■■□□□ 1.92
FAM3A-202ENST00000359889 ZNF853P0CG23 659 aa27■■□□□ 1.91
FAM3A-202ENST00000359889 MS4A1P11836 297 aa27■■□□□ 1.91
FAM3A-202ENST00000359889 SMC4Q9NTJ3 1288 aa26.99■■□□□ 1.91
FAM3A-202ENST00000359889 PLEKHG5O94827 1062 aa26.98■■□□□ 1.91
FAM3A-202ENST00000359889 MTHFSDQ2M296 383 aaKnown RBP26.98■■□□□ 1.91
FAM3A-202ENST00000359889 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
FAM3A-202ENST00000359889 FAM83GA6ND36 823 aa26.97■■□□□ 1.91
FAM3A-202ENST00000359889 HTATSF1O43719 755 aaKnown RBP26.97■■□□□ 1.91
FAM3A-202ENST00000359889 BRINP3Q76B58 766 aa26.97■■□□□ 1.91
FAM3A-202ENST00000359889 TNS3Q68CZ2 1445 aa26.97■■□□□ 1.91
FAM3A-202ENST00000359889 PHRF1Q9P1Y6 1649 aaKnown RBP26.97■■□□□ 1.91
FAM3A-202ENST00000359889 ALDH1L2Q3SY69 923 aa26.96■■□□□ 1.91
FAM3A-202ENST00000359889 LTN1O94822 1766 aa26.96■■□□□ 1.91
FAM3A-202ENST00000359889 DDX17Q92841 729 aaKnown RBP26.96■■□□□ 1.91
FAM3A-202ENST00000359889 BCL2L13Q9BXK5 485 aa26.96■■□□□ 1.91
FAM3A-202ENST00000359889 MBIPQ9NS73 344 aa26.96■■□□□ 1.91
FAM3A-202ENST00000359889 DCTN1Q14203 1278 aa26.95■■□□□ 1.9
FAM3A-202ENST00000359889 ZKSCAN2Q63HK3 967 aa26.95■■□□□ 1.9
FAM3A-202ENST00000359889 SPATA31A3Q5VYP0 1347 aa26.94■■□□□ 1.9
FAM3A-202ENST00000359889 HAP1P54257 671 aaPredicted RBP26.94■■□□□ 1.9
FAM3A-202ENST00000359889 ALS2Q96Q42 1657 aa26.93■■□□□ 1.9
FAM3A-202ENST00000359889 AAMPQ13685 434 aa26.93■■□□□ 1.9
FAM3A-202ENST00000359889 KIF16BQ96L93 1317 aa26.92■■□□□ 1.9
FAM3A-202ENST00000359889 IPO8O15397 1037 aaKnown RBP26.92■■□□□ 1.9
FAM3A-202ENST00000359889 MCM10Q7L590 875 aa26.92■■□□□ 1.9
FAM3A-202ENST00000359889 SSH1Q8WYL5 1049 aa26.92■■□□□ 1.9
FAM3A-202ENST00000359889 XIRP1Q702N8 1843 aaKnown RBP26.92■■□□□ 1.9
FAM3A-202ENST00000359889 PXDNQ92626 1479 aa26.92■■□□□ 1.9
FAM3A-202ENST00000359889 GNAT3A8MTJ3 354 aa26.9■■□□□ 1.9
FAM3A-202ENST00000359889 NBPF6Q5VWK0 638 aa26.9■■□□□ 1.9
FAM3A-202ENST00000359889 ANKRD24Q8TF21 1146 aa26.9■■□□□ 1.9
FAM3A-202ENST00000359889 NBPF4Q96M43 638 aa26.9■■□□□ 1.9
FAM3A-202ENST00000359889 CHL1O00533 1208 aa26.89■■□□□ 1.9
FAM3A-202ENST00000359889 ZC3H6P61129 1189 aaKnown RBP26.89■■□□□ 1.9
FAM3A-202ENST00000359889 USHBP1Q8N6Y0 703 aa26.89■■□□□ 1.9
FAM3A-202ENST00000359889 PANK1Q8TE04 598 aa26.89■■□□□ 1.9
FAM3A-202ENST00000359889 DLG5Q8TDM6 1919 aa26.89■■□□□ 1.89
FAM3A-202ENST00000359889 FTSJ3Q8IY81 847 aaKnown RBP26.88■■□□□ 1.89
FAM3A-202ENST00000359889 TWISTNBQ3B726 338 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms