RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 PIK3R4Q99570 1358 aa22.41■■□□□ 1.18
CDK11A-204ENST00000358779 VAMP4O75379 141 aa22.41■■□□□ 1.18
CDK11A-204ENST00000358779 MRPL50Q8N5N7 158 aaKnown RBP22.41■■□□□ 1.18
CDK11A-204ENST00000358779 IFT57Q9NWB7 429 aa22.41■■□□□ 1.18
CDK11A-204ENST00000358779 GNAI1P63096 354 aa22.4■■□□□ 1.18
CDK11A-204ENST00000358779 METP08581 1390 aa22.4■■□□□ 1.18
CDK11A-204ENST00000358779 CPS1P31327 1500 aa22.4■■□□□ 1.18
CDK11A-204ENST00000358779 C3P01024 1663 aa22.4■■□□□ 1.18
CDK11A-204ENST00000358779 ARHGAP45Q92619 1136 aa22.39■■□□□ 1.17
CDK11A-204ENST00000358779 LNPKQ9C0E8 428 aa22.39■■□□□ 1.17
CDK11A-204ENST00000358779 ZRANB1Q9UGI0 708 aa22.39■■□□□ 1.17
CDK11A-204ENST00000358779 CHD1LQ86WJ1 897 aa22.38■■□□□ 1.17
CDK11A-204ENST00000358779 TSPYL6Q8N831 410 aa22.38■■□□□ 1.17
CDK11A-204ENST00000358779 ZNF853P0CG23 659 aa22.38■■□□□ 1.17
CDK11A-204ENST00000358779 MBIPQ9NS73 344 aa22.38■■□□□ 1.17
CDK11A-204ENST00000358779 CHMP4BQ9H444 224 aaKnown RBP22.37■■□□□ 1.17
CDK11A-204ENST00000358779 ZBTB7BO15156 539 aaPredicted RBP22.37■■□□□ 1.17
CDK11A-204ENST00000358779 MLECQ14165 292 aa22.37■■□□□ 1.17
CDK11A-204ENST00000358779 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.36■■□□□ 1.17
CDK11A-204ENST00000358779 SPRYD3Q8NCJ5 442 aa22.36■■□□□ 1.17
CDK11A-204ENST00000358779 NUDT16Q96DE0 195 aaKnown RBP22.36■■□□□ 1.17
CDK11A-204ENST00000358779 COG3Q96JB2 828 aa22.36■■□□□ 1.17
CDK11A-204ENST00000358779 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
CDK11A-204ENST00000358779 TXNDC2Q86VQ3 553 aa22.35■■□□□ 1.17
CDK11A-204ENST00000358779 TECPR2O15040 1411 aa22.35■■□□□ 1.17
CDK11A-204ENST00000358779 NRKQ7Z2Y5 1582 aa22.35■■□□□ 1.17
CDK11A-204ENST00000358779 ABCC4O15439 1325 aa22.35■■□□□ 1.17
CDK11A-204ENST00000358779 GCC1Q96CN9 775 aa22.33■■□□□ 1.17
CDK11A-204ENST00000358779 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
CDK11A-204ENST00000358779 C1orf115Q9H7X2 142 aa22.33■■□□□ 1.17
CDK11A-204ENST00000358779 NCKAP5LQ9HCH0 1330 aa22.33■■□□□ 1.16
CDK11A-204ENST00000358779 TWISTNBQ3B726 338 aaPredicted RBP22.32■■□□□ 1.16
CDK11A-204ENST00000358779 ELL2O00472 640 aaPredicted RBP22.32■■□□□ 1.16
CDK11A-204ENST00000358779 HSCBQ8IWL3 235 aa22.32■■□□□ 1.16
CDK11A-204ENST00000358779 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
CDK11A-204ENST00000358779 CCDC61Q9Y6R9 512 aa22.32■■□□□ 1.16
CDK11A-204ENST00000358779 RBM25P49756 843 aaKnown RBP22.31■■□□□ 1.16
CDK11A-204ENST00000358779 BMP2KLQ5H9B9 411 aa22.31■■□□□ 1.16
CDK11A-204ENST00000358779 CHMP5Q9NZZ3 219 aa22.31■■□□□ 1.16
CDK11A-204ENST00000358779 ANKRD45Q5TZF3 282 aa22.3■■□□□ 1.16
CDK11A-204ENST00000358779 SIRT1Q96EB6 747 aa22.3■■□□□ 1.16
CDK11A-204ENST00000358779 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
CDK11A-204ENST00000358779 FAM83GA6ND36 823 aa22.28■■□□□ 1.16
CDK11A-204ENST00000358779 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
CDK11A-204ENST00000358779 API5Q9BZZ5 524 aaKnown RBP22.28■■□□□ 1.16
CDK11A-204ENST00000358779 MCM4P33991 863 aa22.27■■□□□ 1.16
CDK11A-204ENST00000358779 SIRT2Q8IXJ6 389 aa22.27■■□□□ 1.16
CDK11A-204ENST00000358779 PRR36Q9H6K5 1346 aa22.27■■□□□ 1.15
CDK11A-204ENST00000358779 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
CDK11A-204ENST00000358779 ZNF692Q9BU19 519 aaPredicted RBP22.25■■□□□ 1.15
CDK11A-204ENST00000358779 UBR1Q8IWV7 1749 aa22.25■■□□□ 1.15
CDK11A-204ENST00000358779 DCTN1Q14203 1278 aa22.25■■□□□ 1.15
CDK11A-204ENST00000358779 SNX21Q969T3 373 aa22.25■■□□□ 1.15
CDK11A-204ENST00000358779 KIF24Q5T7B8 1368 aa22.24■■□□□ 1.15
CDK11A-204ENST00000358779 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
CDK11A-204ENST00000358779 ESF1Q9H501 851 aaKnown RBP22.24■■□□□ 1.15
CDK11A-204ENST00000358779 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
CDK11A-204ENST00000358779 TNRQ92752 1358 aa22.22■■□□□ 1.15
CDK11A-204ENST00000358779 NALCNQ8IZF0 1738 aa22.22■■□□□ 1.15
CDK11A-204ENST00000358779 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.22■■□□□ 1.15
CDK11A-204ENST00000358779 ROBO2Q9HCK4 1378 aa22.22■■□□□ 1.15
CDK11A-204ENST00000358779 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
CDK11A-204ENST00000358779 AEBP1Q8IUX7 1158 aa22.21■■□□□ 1.15
CDK11A-204ENST00000358779 OVOS2A0A0J9YW53 1432 aa22.2■■□□□ 1.15
CDK11A-204ENST00000358779 OVOS2Q6IE36 1432 aa22.2■■□□□ 1.15
CDK11A-204ENST00000358779 DDIT3P35638 169 aa22.2■■□□□ 1.14
CDK11A-204ENST00000358779 TBC1D9Q6ZT07 1266 aa22.2■■□□□ 1.14
CDK11A-204ENST00000358779 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
CDK11A-204ENST00000358779 PEAK1Q9H792 1746 aa22.2■■□□□ 1.14
CDK11A-204ENST00000358779 TMEM2Q9UHN6 1383 aa22.2■■□□□ 1.14
CDK11A-204ENST00000358779 TTC21BQ7Z4L5 1316 aa22.19■■□□□ 1.14
CDK11A-204ENST00000358779 SULT6B1Q6IMI4 303 aa22.19■■□□□ 1.14
CDK11A-204ENST00000358779 ADAMTS13Q76LX8 1427 aa22.18■■□□□ 1.14
CDK11A-204ENST00000358779 KIF2CQ99661 725 aa22.18■■□□□ 1.14
CDK11A-204ENST00000358779 RGS12O14924 1447 aa22.17■■□□□ 1.14
CDK11A-204ENST00000358779 KIF13AQ9H1H9 1805 aa22.16■■□□□ 1.14
CDK11A-204ENST00000358779 HSP90AB1P08238 724 aaKnown RBP22.16■■□□□ 1.14
CDK11A-204ENST00000358779 INTS3Q68E01 1043 aaKnown RBP22.16■■□□□ 1.14
CDK11A-204ENST00000358779 ACEP12821 1306 aa22.15■■□□□ 1.14
CDK11A-204ENST00000358779 USP6P35125 1406 aa22.15■■□□□ 1.14
CDK11A-204ENST00000358779 CDC45O75419 566 aa22.15■■□□□ 1.14
CDK11A-204ENST00000358779 HAP1P54257 671 aaPredicted RBP22.15■■□□□ 1.14
CDK11A-204ENST00000358779 ATP10DQ9P241 1426 aa22.15■■□□□ 1.14
CDK11A-204ENST00000358779 DDX11L8A8MPP1 907 aa22.15■■□□□ 1.14
CDK11A-204ENST00000358779 FMN2Q9NZ56 1722 aa22.14■■□□□ 1.14
CDK11A-204ENST00000358779 CHL1O00533 1208 aa22.14■■□□□ 1.13
CDK11A-204ENST00000358779 TRAK2O60296 914 aa22.14■■□□□ 1.13
CDK11A-204ENST00000358779 KRT24Q2M2I5 525 aa22.14■■□□□ 1.13
CDK11A-204ENST00000358779 KIAA0232Q92628 1395 aa22.14■■□□□ 1.13
CDK11A-204ENST00000358779 DCTPP1Q9H773 170 aa22.14■■□□□ 1.13
CDK11A-204ENST00000358779 CIZ1Q9ULV3 898 aaPredicted RBP22.14■■□□□ 1.13
CDK11A-204ENST00000358779 GSPT1P15170 499 aaKnown RBP22.13■■□□□ 1.13
CDK11A-204ENST00000358779 MCM10Q7L590 875 aa22.13■■□□□ 1.13
CDK11A-204ENST00000358779 FAM43AQ8N2R8 423 aa22.13■■□□□ 1.13
CDK11A-204ENST00000358779 GOLGA6L3A6NEY3 463 aa22.12■■□□□ 1.13
CDK11A-204ENST00000358779 PLEKHM2Q8IWE5 1019 aa22.12■■□□□ 1.13
CDK11A-204ENST00000358779 PLEKHG3A1L390 1219 aa22.12■■□□□ 1.13
CDK11A-204ENST00000358779 FSD2A1L4K1 749 aa22.12■■□□□ 1.13
CDK11A-204ENST00000358779 GZF1Q9H116 711 aaPredicted RBP22.12■■□□□ 1.13
CDK11A-204ENST00000358779 MSH6P52701 1360 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms