RNA–Protein interactions for RNA: ENST00000356508.9

PLD3-201, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLD3, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-201ENST00000356508 USP19O94966 1318 aa20.39■□□□□ 0.85
PLD3-201ENST00000356508 ROBO1Q9Y6N7 1651 aa20.39■□□□□ 0.85
PLD3-201ENST00000356508 ANP32AP39687 249 aaKnown RBP20.39■□□□□ 0.85
PLD3-201ENST00000356508 MAP2P11137 1827 aaKnown RBP20.38■□□□□ 0.85
PLD3-201ENST00000356508 CDK12Q9NYV4 1490 aaPredicted RBP20.38■□□□□ 0.85
PLD3-201ENST00000356508 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
PLD3-201ENST00000356508 ALS2Q96Q42 1657 aa20.37■□□□□ 0.85
PLD3-201ENST00000356508 KIF24Q5T7B8 1368 aa20.37■□□□□ 0.85
PLD3-201ENST00000356508 NHSL1Q5SYE7 1610 aa20.36■□□□□ 0.85
PLD3-201ENST00000356508 ZBTB7CA1YPR0 619 aa20.36■□□□□ 0.85
PLD3-201ENST00000356508 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
PLD3-201ENST00000356508 HAP1P54257 671 aaPredicted RBP20.36■□□□□ 0.85
PLD3-201ENST00000356508 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
PLD3-201ENST00000356508 FLT4P35916 1363 aa20.36■□□□□ 0.85
PLD3-201ENST00000356508 ZBTB47Q9UFB7 747 aaPredicted RBP20.35■□□□□ 0.85
PLD3-201ENST00000356508 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
PLD3-201ENST00000356508 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
PLD3-201ENST00000356508 SLIT3O75094 1523 aa20.34■□□□□ 0.85
PLD3-201ENST00000356508 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.85
PLD3-201ENST00000356508 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.85
PLD3-201ENST00000356508 HOXC9P31274 260 aa20.33■□□□□ 0.84
PLD3-201ENST00000356508 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.84
PLD3-201ENST00000356508 MARF1Q9Y4F3 1742 aaKnown RBP20.33■□□□□ 0.84
PLD3-201ENST00000356508 COL3A1P02461 1466 aaPredicted RBP20.32■□□□□ 0.84
PLD3-201ENST00000356508 AHDC1Q5TGY3 1603 aaPredicted RBP20.32■□□□□ 0.84
PLD3-201ENST00000356508 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
PLD3-201ENST00000356508 ZC3H6P61129 1189 aaKnown RBP20.32■□□□□ 0.84
PLD3-201ENST00000356508 ARHGEF25Q86VW2 580 aa20.32■□□□□ 0.84
PLD3-201ENST00000356508 IL13P35225 146 aa20.31■□□□□ 0.84
PLD3-201ENST00000356508 IP6K1Q92551 441 aa20.31■□□□□ 0.84
PLD3-201ENST00000356508 NFAT5O94916 1531 aa20.31■□□□□ 0.84
PLD3-201ENST00000356508 EIF4A2Q14240 407 aaKnown RBP20.3■□□□□ 0.84
PLD3-201ENST00000356508 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
PLD3-201ENST00000356508 NEFMP07197 916 aa20.28■□□□□ 0.84
PLD3-201ENST00000356508 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
PLD3-201ENST00000356508 PKNOX2Q96KN3 472 aa20.28■□□□□ 0.84
PLD3-201ENST00000356508 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.84
PLD3-201ENST00000356508 SHPRHQ149N8 1683 aa20.27■□□□□ 0.84
PLD3-201ENST00000356508 FCHSD2O94868 740 aa20.27■□□□□ 0.84
PLD3-201ENST00000356508 RUNDC1Q96C34 613 aa20.27■□□□□ 0.84
PLD3-201ENST00000356508 RTN4Q9NQC3 1192 aaKnown RBP20.26■□□□□ 0.83
PLD3-201ENST00000356508 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
PLD3-201ENST00000356508 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
PLD3-201ENST00000356508 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
PLD3-201ENST00000356508 PRDM11Q9NQV5 511 aa20.24■□□□□ 0.83
PLD3-201ENST00000356508 CPDO75976 1380 aa20.24■□□□□ 0.83
PLD3-201ENST00000356508 MAPK8IP3Q9UPT6 1336 aa20.24■□□□□ 0.83
PLD3-201ENST00000356508 HMOX1P09601 288 aa20.23■□□□□ 0.83
PLD3-201ENST00000356508 LTN1O94822 1766 aa20.23■□□□□ 0.83
PLD3-201ENST00000356508 PHRF1Q9P1Y6 1649 aaKnown RBP20.23■□□□□ 0.83
PLD3-201ENST00000356508 KIAA0232Q92628 1395 aa20.23■□□□□ 0.83
PLD3-201ENST00000356508 EIF5BO60841 1220 aaKnown RBP20.23■□□□□ 0.83
PLD3-201ENST00000356508 APAF1O14727 1248 aa20.22■□□□□ 0.83
PLD3-201ENST00000356508 B4GALNT3Q6L9W6 998 aa20.22■□□□□ 0.83
PLD3-201ENST00000356508 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
PLD3-201ENST00000356508 SULT6B1Q6IMI4 303 aa20.21■□□□□ 0.83
PLD3-201ENST00000356508 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
PLD3-201ENST00000356508 CHRNA2Q15822 529 aa20.21■□□□□ 0.83
PLD3-201ENST00000356508 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
PLD3-201ENST00000356508 ANKRD24Q8TF21 1146 aa20.2■□□□□ 0.82
PLD3-201ENST00000356508 EYA1Q99502 592 aa20.2■□□□□ 0.82
PLD3-201ENST00000356508 COL16A1Q07092 1604 aaPredicted RBP20.19■□□□□ 0.82
PLD3-201ENST00000356508 AXIN2Q9Y2T1 843 aa20.19■□□□□ 0.82
PLD3-201ENST00000356508 TCP11L2Q8N4U5 519 aa20.19■□□□□ 0.82
PLD3-201ENST00000356508 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
PLD3-201ENST00000356508 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
PLD3-201ENST00000356508 CRYBG1Q9Y4K1 1723 aa20.17■□□□□ 0.82
PLD3-201ENST00000356508 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
PLD3-201ENST00000356508 PDE3BQ13370 1112 aa20.17■□□□□ 0.82
PLD3-201ENST00000356508 ABCC6O95255 1503 aa20.16■□□□□ 0.82
PLD3-201ENST00000356508 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
PLD3-201ENST00000356508 ERBB3P21860 1342 aa20.15■□□□□ 0.82
PLD3-201ENST00000356508 JCADQ9P266 1359 aa20.15■□□□□ 0.82
PLD3-201ENST00000356508 AEBP1Q8IUX7 1158 aa20.15■□□□□ 0.82
PLD3-201ENST00000356508 COL22A1Q8NFW1 1626 aaPredicted RBP20.15■□□□□ 0.82
PLD3-201ENST00000356508 RNF123Q5XPI4 1314 aa20.15■□□□□ 0.82
PLD3-201ENST00000356508 NBPF6Q5VWK0 638 aa20.14■□□□□ 0.81
PLD3-201ENST00000356508 NBPF4Q96M43 638 aa20.14■□□□□ 0.81
PLD3-201ENST00000356508 FAM83GA6ND36 823 aa20.14■□□□□ 0.81
PLD3-201ENST00000356508 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
PLD3-201ENST00000356508 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
PLD3-201ENST00000356508 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
PLD3-201ENST00000356508 EVA1CP58658 441 aa20.13■□□□□ 0.81
PLD3-201ENST00000356508 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
PLD3-201ENST00000356508 NLRP2Q9NX02 1062 aa20.13■□□□□ 0.81
PLD3-201ENST00000356508 RRP7AQ9Y3A4 280 aaKnown RBP20.13■□□□□ 0.81
PLD3-201ENST00000356508 TMPOP42166 694 aaKnown RBP20.12■□□□□ 0.81
PLD3-201ENST00000356508 CDCA7LQ96GN5 454 aa20.12■□□□□ 0.81
PLD3-201ENST00000356508 KDRP35968 1356 aa20.12■□□□□ 0.81
PLD3-201ENST00000356508 ABCA3Q99758 1704 aa20.12■□□□□ 0.81
PLD3-201ENST00000356508 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
PLD3-201ENST00000356508 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
PLD3-201ENST00000356508 HSPA1LP34931 641 aa20.11■□□□□ 0.81
PLD3-201ENST00000356508 USHBP1Q8N6Y0 703 aa20.11■□□□□ 0.81
PLD3-201ENST00000356508 RGPD1P0DJD0 1748 aa20.11■□□□□ 0.81
PLD3-201ENST00000356508 RIPK4P57078 832 aa20.1■□□□□ 0.81
PLD3-201ENST00000356508 GLIPR1L2Q4G1C9 344 aa20.1■□□□□ 0.81
PLD3-201ENST00000356508 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
PLD3-201ENST00000356508 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
PLD3-201ENST00000356508 COL18A1P39060 1754 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms