RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 STIM1Q13586 685 aa19.04■□□□□ 0.64
RXRA-201ENST00000356384 ANKRD18AQ8IVF6 992 aa19.04■□□□□ 0.64
RXRA-201ENST00000356384 EXOSC9Q06265 439 aaKnown RBP19.03■□□□□ 0.64
RXRA-201ENST00000356384 CCDC7Q96M83 1385 aa19.03■□□□□ 0.64
RXRA-201ENST00000356384 CCDC112Q8NEF3 446 aa19.03■□□□□ 0.64
RXRA-201ENST00000356384 GNAI2P04899 355 aa19.03■□□□□ 0.64
RXRA-201ENST00000356384 CDCA7LQ96GN5 454 aa19.03■□□□□ 0.64
RXRA-201ENST00000356384 DACH1Q9UI36 760 aa19.03■□□□□ 0.64
RXRA-201ENST00000356384 STRN4Q9NRL3 753 aa19.02■□□□□ 0.64
RXRA-201ENST00000356384 FAM193AP78312 1265 aa19.02■□□□□ 0.64
RXRA-201ENST00000356384 TRIM22Q8IYM9 498 aa19.02■□□□□ 0.64
RXRA-201ENST00000356384 GAS2L2Q8NHY3 880 aa19.02■□□□□ 0.64
RXRA-201ENST00000356384 GOLGA6L7A0A1B0GV03 622 aa19.02■□□□□ 0.64
RXRA-201ENST00000356384 TWISTNBQ3B726 338 aaPredicted RBP19.02■□□□□ 0.63
RXRA-201ENST00000356384 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.02■□□□□ 0.633e-6■■■■□ 22.1
RXRA-201ENST00000356384 IFT140Q96RY7 1462 aa19.02■□□□□ 0.63
RXRA-201ENST00000356384 MAP4K4O95819 1239 aaPredicted RBP19.01■□□□□ 0.63
RXRA-201ENST00000356384 NUP133Q8WUM0 1156 aa19.01■□□□□ 0.63
RXRA-201ENST00000356384 SIL1Q9H173 461 aa19.01■□□□□ 0.63
RXRA-201ENST00000356384 GNL3LQ9NVN8 582 aaKnown RBP19.01■□□□□ 0.63
RXRA-201ENST00000356384 PRKAR2BP31323 418 aa19■□□□□ 0.63
RXRA-201ENST00000356384 GCC1Q96CN9 775 aa19■□□□□ 0.63
RXRA-201ENST00000356384 SEPT11Q9NVA2 429 aaKnown RBP19■□□□□ 0.63
RXRA-201ENST00000356384 CCDC69A6NI79 296 aa19■□□□□ 0.63
RXRA-201ENST00000356384 AEBP1Q8IUX7 1158 aa19■□□□□ 0.63
RXRA-201ENST00000356384 WASHC2AQ641Q2 1341 aa19■□□□□ 0.63
RXRA-201ENST00000356384 ERLIN1O75477 346 aa19■□□□□ 0.63
RXRA-201ENST00000356384 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
RXRA-201ENST00000356384 ESCO1Q5FWF5 840 aa18.99■□□□□ 0.63
RXRA-201ENST00000356384 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
RXRA-201ENST00000356384 PLEKHO1Q53GL0 409 aaPredicted RBP18.99■□□□□ 0.63
RXRA-201ENST00000356384 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
RXRA-201ENST00000356384 NUTM2BA6NNL0 878 aaPredicted RBP18.98■□□□□ 0.63
RXRA-201ENST00000356384 NUTM2EB1AL46 878 aaPredicted RBP18.98■□□□□ 0.63
RXRA-201ENST00000356384 NUTM2AQ8IVF1 878 aaPredicted RBP18.98■□□□□ 0.63
RXRA-201ENST00000356384 NACAP1Q9BZK3 213 aa18.98■□□□□ 0.63
RXRA-201ENST00000356384 ANKRD1Q15327 319 aa18.98■□□□□ 0.63
RXRA-201ENST00000356384 ABTB2Q8N961 1025 aa18.98■□□□□ 0.63
RXRA-201ENST00000356384 KRT85P78386 507 aa18.98■□□□□ 0.63
RXRA-201ENST00000356384 DHX8Q14562 1220 aaKnown RBP18.98■□□□□ 0.63
RXRA-201ENST00000356384 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
RXRA-201ENST00000356384 EIF3JO75822 258 aaKnown RBP18.98■□□□□ 0.63
RXRA-201ENST00000356384 TXLNBQ8N3L3 684 aa18.98■□□□□ 0.63
RXRA-201ENST00000356384 WDR33Q9C0J8 1336 aaKnown RBP18.98■□□□□ 0.63
RXRA-201ENST00000356384 LARP1BQ659C4 914 aaKnown RBP18.97■□□□□ 0.63
RXRA-201ENST00000356384 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
RXRA-201ENST00000356384 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
RXRA-201ENST00000356384 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
RXRA-201ENST00000356384 SSBP05455 408 aaKnown RBP eCLIP18.97■□□□□ 0.63
RXRA-201ENST00000356384 CBFA2T2O43439 604 aa18.96■□□□□ 0.63
RXRA-201ENST00000356384 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
RXRA-201ENST00000356384 EZRP15311 586 aaKnown RBP18.96■□□□□ 0.63
RXRA-201ENST00000356384 CNTLNQ9NXG0 1405 aa18.96■□□□□ 0.63
RXRA-201ENST00000356384 LRRCC1Q9C099 1032 aa18.96■□□□□ 0.63
RXRA-201ENST00000356384 TSR2Q969E8 191 aaKnown RBP18.96■□□□□ 0.63
RXRA-201ENST00000356384 K7ELQ4 463 aaPredicted RBP18.95■□□□□ 0.62
RXRA-201ENST00000356384 NOL7Q9UMY1 257 aaKnown RBP18.95■□□□□ 0.62
RXRA-201ENST00000356384 LAMC3Q9Y6N6 1575 aa18.95■□□□□ 0.62
RXRA-201ENST00000356384 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
RXRA-201ENST00000356384 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
RXRA-201ENST00000356384 BRD4O60885 1362 aaPredicted RBP18.94■□□□□ 0.62
RXRA-201ENST00000356384 UQCRHLA0A096LP55 91 aa18.94■□□□□ 0.62
RXRA-201ENST00000356384 UQCRHP07919 91 aa18.94■□□□□ 0.62
RXRA-201ENST00000356384 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
RXRA-201ENST00000356384 SPATA32Q96LK8 384 aa18.94■□□□□ 0.62
RXRA-201ENST00000356384 GRPEL1Q9HAV7 217 aa18.94■□□□□ 0.62
RXRA-201ENST00000356384 IL27Q8NEV9 243 aa18.93■□□□□ 0.62
RXRA-201ENST00000356384 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
RXRA-201ENST00000356384 CASKIN1Q8WXD9 1431 aa18.93■□□□□ 0.62
RXRA-201ENST00000356384 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
RXRA-201ENST00000356384 CCDC102AQ96A19 550 aa18.93■□□□□ 0.62
RXRA-201ENST00000356384 PROSER2Q86WR7 435 aaPredicted RBP18.92■□□□□ 0.62
RXRA-201ENST00000356384 FKBP4Q02790 459 aaKnown RBP eCLIP18.92■□□□□ 0.622e-6■■■■■ 29.8
RXRA-201ENST00000356384 FILIP1Q7Z7B0 1213 aa18.92■□□□□ 0.62
RXRA-201ENST00000356384 BCAR3O75815 825 aa18.92■□□□□ 0.62
RXRA-201ENST00000356384 PPP2R1AP30153 589 aa18.92■□□□□ 0.62
RXRA-201ENST00000356384 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.624e-6■■■□□ 18.3
RXRA-201ENST00000356384 IQCEQ6IPM2 695 aa18.91■□□□□ 0.62
RXRA-201ENST00000356384 BMP2KQ9NSY1 1161 aaPredicted RBP18.91■□□□□ 0.62
RXRA-201ENST00000356384 GBP2P32456 591 aaPredicted RBP18.91■□□□□ 0.62
RXRA-201ENST00000356384 CCDC57Q2TAC2 916 aa18.91■□□□□ 0.62
RXRA-201ENST00000356384 CEP57L1Q8IYX8 460 aa18.91■□□□□ 0.62
RXRA-201ENST00000356384 CCT4P50991 539 aaKnown RBP18.9■□□□□ 0.62
RXRA-201ENST00000356384 TAF3Q5VWG9 929 aa18.9■□□□□ 0.62
RXRA-201ENST00000356384 BLOC1S2Q6QNY1 142 aa18.9■□□□□ 0.62
RXRA-201ENST00000356384 PDRG1Q9NUG6 133 aa18.9■□□□□ 0.62
RXRA-201ENST00000356384 UPF3BQ9BZI7 483 aaKnown RBP18.9■□□□□ 0.62
RXRA-201ENST00000356384 NEBLO76041 1014 aa18.9■□□□□ 0.62
RXRA-201ENST00000356384 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
RXRA-201ENST00000356384 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
RXRA-201ENST00000356384 MATR3P43243 847 aaKnown RBP eCLIP18.9■□□□□ 0.62
RXRA-201ENST00000356384 SSR1P43307 286 aaKnown RBP18.9■□□□□ 0.62
RXRA-201ENST00000356384 PIBF1Q8WXW3 757 aa18.9■□□□□ 0.62
RXRA-201ENST00000356384 PDE3AQ14432 1141 aa18.89■□□□□ 0.62
RXRA-201ENST00000356384 NUP62CLQ9H1M0 184 aa18.89■□□□□ 0.62
RXRA-201ENST00000356384 MYL6BP14649 208 aa18.89■□□□□ 0.61
RXRA-201ENST00000356384 AACSQ86V21 672 aa18.89■□□□□ 0.61
RXRA-201ENST00000356384 KIAA1328Q86T90 577 aa18.89■□□□□ 0.61
RXRA-201ENST00000356384 ERICH4A6NGS2 130 aa18.89■□□□□ 0.61
RXRA-201ENST00000356384 CABP4P57796 275 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms