RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 PDIA4P13667 645 aaKnown RBP9.29□□□□□ -0.92
VANGL1-202ENST00000355485 EZRP15311 586 aaKnown RBP9.29□□□□□ -0.92
VANGL1-202ENST00000355485 HOMER2Q9NSB8 354 aa9.29□□□□□ -0.92
VANGL1-202ENST00000355485 USP8P40818 1118 aa9.29□□□□□ -0.92
VANGL1-202ENST00000355485 C1orf141Q5JVX7 400 aa9.29□□□□□ -0.92
VANGL1-202ENST00000355485 ERLIN1O75477 346 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 SYCP1Q15431 976 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 DDX54Q8TDD1 881 aaKnown RBP9.28□□□□□ -0.92
VANGL1-202ENST00000355485 WDR33Q9C0J8 1336 aaKnown RBP9.28□□□□□ -0.92
VANGL1-202ENST00000355485 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
VANGL1-202ENST00000355485 TAX1BP1Q86VP1 789 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 NBPF8Q3BBV2 869 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 TERF2IPQ9NYB0 399 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 TTC5Q8N0Z6 440 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 TCP11L2Q8N4U5 519 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 CLIP2Q9UDT6 1046 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 WDR97A6NE52 1622 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 KIF21BO75037 1637 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 IGHDP01880 384 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 DRC1Q96MC2 740 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 MTMR7Q9Y216 660 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 AMPHP49418 695 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 CUX1P39880 1505 aa9.28□□□□□ -0.92
VANGL1-202ENST00000355485 SMAP1Q8IYB5 467 aaPredicted RBP9.28□□□□□ -0.92
VANGL1-202ENST00000355485 SPATA32Q96LK8 384 aa9.27□□□□□ -0.92
VANGL1-202ENST00000355485 C9orf78Q9NZ63 289 aaPredicted RBP9.27□□□□□ -0.92
VANGL1-202ENST00000355485 ERC2O15083 957 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 SMARCE1Q969G3 411 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
VANGL1-202ENST00000355485 CKAP2LQ8IYA6 745 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 NGDNQ8NEJ9 315 aaKnown RBP9.27□□□□□ -0.93
VANGL1-202ENST00000355485 GTPBP4Q9BZE4 634 aaKnown RBP9.27□□□□□ -0.93
VANGL1-202ENST00000355485 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 C10orf67Q8IYJ2 551 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 CNTROBQ8N137 903 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 RFX1P22670 979 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 CCDC181Q5TID7 509 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 CEP135Q66GS9 1140 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 ATP2C2O75185 946 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 NOLC1Q14978 699 aaKnown RBP eCLIP9.27□□□□□ -0.93
VANGL1-202ENST00000355485 STK38Q15208 465 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
VANGL1-202ENST00000355485 ZSWIM4Q9H7M6 989 aa9.27□□□□□ -0.93
VANGL1-202ENST00000355485 LRRFIP2Q9Y608 721 aaKnown RBP9.26□□□□□ -0.93
VANGL1-202ENST00000355485 SHTN1A0MZ66 631 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 MPHOSPH10O00566 681 aaKnown RBP9.26□□□□□ -0.93
VANGL1-202ENST00000355485 ME1P48163 572 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 GGNBP2Q9H3C7 697 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 PDE3AQ14432 1141 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 PPFIBP1Q86W92 1011 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 CCDC83Q8IWF9 413 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 BRMS1Q9HCU9 246 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 RSPH14Q9UHP6 348 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 CARMIL2Q6F5E8 1435 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 MVPQ14764 893 aaKnown RBP9.26□□□□□ -0.93
VANGL1-202ENST00000355485 FILIP1LQ4L180 1135 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 WASHC2CQ9Y4E1 1318 aa9.26□□□□□ -0.93
VANGL1-202ENST00000355485 SYTL4Q96C24 671 aaPredicted RBP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 BAG4O95429 457 aaKnown RBP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 G3BP1Q13283 466 aaKnown RBP eCLIP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 GCC1Q96CN9 775 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 UACAQ9BZF9 1416 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 U2AF2P26368 475 aaKnown RBP eCLIP9.25□□□□□ -0.933e-7■■■■■ 27.8
VANGL1-202ENST00000355485 MAP3K11Q16584 847 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 BCCIPQ9P287 314 aaKnown RBP eCLIP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 FYB1O15117 783 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 CCDC183Q5T5S1 534 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 UPF3BQ9BZI7 483 aaKnown RBP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 NCAPD3P42695 1498 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 MNAT1P51948 309 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 C16orf71Q8IYS4 520 aaPredicted RBP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 LIG1P18858 919 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 WASHC4Q2M389 1173 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 TTC12Q9H892 705 aaPredicted RBP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
VANGL1-202ENST00000355485 RRBP1Q9P2E9 1410 aaKnown RBP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
VANGL1-202ENST00000355485 PABPN1LA6NDY0 278 aaKnown RBP9.24□□□□□ -0.93
VANGL1-202ENST00000355485 DDX11Q96FC9 970 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 NEUROD6Q96NK8 337 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 GOLGA6L10A6NI86 522 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 PSMA5P28066 241 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 MIA2Q96PC5 1412 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 OFD1O75665 1012 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 KRT85P78386 507 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 ENOX2Q16206 610 aaKnown RBP9.24□□□□□ -0.93
VANGL1-202ENST00000355485 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 DYDC1Q8WWB3 177 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 PDRG1Q9NUG6 133 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 TRDNQ13061 729 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 KIF18AQ8NI77 898 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 SURF6O75683 361 aaKnown RBP9.24□□□□□ -0.93
VANGL1-202ENST00000355485 KRT222Q8N1A0 295 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 RAI14Q9P0K7 980 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 CPLX3Q8WVH0 158 aa9.24□□□□□ -0.93
VANGL1-202ENST00000355485 JAKMIP1Q96N16 626 aaKnown RBP9.24□□□□□ -0.93
VANGL1-202ENST00000355485 ZNF396Q96N95 335 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms