RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 ADAM33Q9BZ11 813 aa9.99□□□□□ -0.81
C11orf54-202ENST00000354421 USP47Q96K76 1375 aa9.99□□□□□ -0.81
C11orf54-202ENST00000354421 BRD4O60885 1362 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-202ENST00000354421 TMEM94Q12767 1356 aa9.99□□□□□ -0.81
C11orf54-202ENST00000354421 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-202ENST00000354421 TRPC5Q9UL62 973 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-202ENST00000354421 KIAA1107Q9UPP5 1409 aa9.98□□□□□ -0.81
C11orf54-202ENST00000354421 MS4A1P11836 297 aa9.98□□□□□ -0.81
C11orf54-202ENST00000354421 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
C11orf54-202ENST00000354421 ZNF518AQ6AHZ1 1483 aa9.97□□□□□ -0.81
C11orf54-202ENST00000354421 RALGAPBQ86X10 1494 aa9.97□□□□□ -0.81
C11orf54-202ENST00000354421 KIF15Q9NS87 1388 aa9.97□□□□□ -0.81
C11orf54-202ENST00000354421 PPP1R3GB7ZBB8 358 aa9.97□□□□□ -0.81
C11orf54-202ENST00000354421 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
C11orf54-202ENST00000354421 ADGRL2O95490 1459 aa9.97□□□□□ -0.81
C11orf54-202ENST00000354421 ADGBQ8N7X0 1667 aa9.96□□□□□ -0.81
C11orf54-202ENST00000354421 CAMTA1Q9Y6Y1 1673 aa9.96□□□□□ -0.81
C11orf54-202ENST00000354421 AFAP1Q8N556 730 aa9.96□□□□□ -0.81
C11orf54-202ENST00000354421 ANKK1Q8NFD2 765 aa9.96□□□□□ -0.81
C11orf54-202ENST00000354421 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.81
C11orf54-202ENST00000354421 RABGEF1Q9UJ41 708 aa9.96□□□□□ -0.81
C11orf54-202ENST00000354421 RRP1P56182 461 aaKnown RBP9.96□□□□□ -0.82
C11orf54-202ENST00000354421 PDE3BQ13370 1112 aa9.95□□□□□ -0.82
C11orf54-202ENST00000354421 TMC1Q8TDI8 760 aa9.95□□□□□ -0.82
C11orf54-202ENST00000354421 E9PCH4 1651 aa9.95□□□□□ -0.82
C11orf54-202ENST00000354421 PLCH2O75038 1416 aa9.95□□□□□ -0.82
C11orf54-202ENST00000354421 MYBBP1AQ9BQG0 1328 aaKnown RBP9.94□□□□□ -0.82
C11orf54-202ENST00000354421 BAG6P46379 1132 aa9.94□□□□□ -0.82
C11orf54-202ENST00000354421 RALBP1Q15311 655 aa9.94□□□□□ -0.82
C11orf54-202ENST00000354421 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
C11orf54-202ENST00000354421 INSRP06213 1382 aa9.94□□□□□ -0.82
C11orf54-202ENST00000354421 ABCA6Q8N139 1617 aa9.93□□□□□ -0.82
C11orf54-202ENST00000354421 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
C11orf54-202ENST00000354421 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
C11orf54-202ENST00000354421 FBXW7Q969H0 707 aa9.93□□□□□ -0.82
C11orf54-202ENST00000354421 BACH2Q9BYV9 841 aa9.93□□□□□ -0.82
C11orf54-202ENST00000354421 WASHC2CQ9Y4E1 1318 aa9.93□□□□□ -0.82
C11orf54-202ENST00000354421 PPM1GO15355 546 aaPredicted RBP9.93□□□□□ -0.82
C11orf54-202ENST00000354421 ITGBL1O95965 494 aaPredicted RBP9.93□□□□□ -0.82
C11orf54-202ENST00000354421 MFSD10Q14728 455 aa9.93□□□□□ -0.82
C11orf54-202ENST00000354421 CROCC2H7BZ55 1655 aa9.92□□□□□ -0.82
C11orf54-202ENST00000354421 CLTCQ00610 1675 aaKnown RBP9.92□□□□□ -0.82
C11orf54-202ENST00000354421 PRKCSHP14314 528 aaPredicted RBP9.92□□□□□ -0.82
C11orf54-202ENST00000354421 EXOC6Q8TAG9 804 aa9.92□□□□□ -0.82
C11orf54-202ENST00000354421 USP21Q9UK80 565 aa9.92□□□□□ -0.82
C11orf54-202ENST00000354421 WWC3Q9ULE0 1092 aa9.92□□□□□ -0.82
C11orf54-202ENST00000354421 MLH3Q9UHC1 1453 aa9.92□□□□□ -0.82
C11orf54-202ENST00000354421 CHD4Q14839 1912 aa9.91□□□□□ -0.82
C11orf54-202ENST00000354421 ITSN2Q9NZM3 1697 aa9.91□□□□□ -0.82
C11orf54-202ENST00000354421 ATP7AQ04656 1500 aa9.91□□□□□ -0.82
C11orf54-202ENST00000354421 RCAN3Q9UKA8 241 aa9.91□□□□□ -0.82
C11orf54-202ENST00000354421 NUP153P49790 1475 aaKnown RBP9.91□□□□□ -0.82
C11orf54-202ENST00000354421 CAMSAP2Q08AD1 1489 aa9.91□□□□□ -0.82
C11orf54-202ENST00000354421 ZNF644Q9H582 1327 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-202ENST00000354421 FAM135AQ9P2D6 1515 aa9.91□□□□□ -0.82
C11orf54-202ENST00000354421 AHDC1Q5TGY3 1603 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-202ENST00000354421 PLEKHD1A6NEE1 506 aa9.9□□□□□ -0.82
C11orf54-202ENST00000354421 LCE2BO14633 110 aa9.9□□□□□ -0.82
C11orf54-202ENST00000354421 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
C11orf54-202ENST00000354421 TNRQ92752 1358 aa9.9□□□□□ -0.82
C11orf54-202ENST00000354421 UNC13BO14795 1591 aa9.9□□□□□ -0.82
C11orf54-202ENST00000354421 ATRNO75882 1429 aa9.9□□□□□ -0.82
C11orf54-202ENST00000354421 ONECUT3O60422 494 aaPredicted RBP9.9□□□□□ -0.83
C11orf54-202ENST00000354421 EFCAB2Q5VUJ9 269 aa9.9□□□□□ -0.83
C11orf54-202ENST00000354421 TROQ12816 1431 aaPredicted RBP9.89□□□□□ -0.83
C11orf54-202ENST00000354421 DIP2AQ14689 1571 aa9.89□□□□□ -0.83
C11orf54-202ENST00000354421 MSH6P52701 1360 aa9.89□□□□□ -0.83
C11orf54-202ENST00000354421 PROSER2Q86WR7 435 aaPredicted RBP9.89□□□□□ -0.83
C11orf54-202ENST00000354421 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
C11orf54-202ENST00000354421 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
C11orf54-202ENST00000354421 ZC3H13Q5T200 1668 aaKnown RBP9.89□□□□□ -0.83
C11orf54-202ENST00000354421 ANKRD30AQ9BXX3 1397 aa9.88□□□□□ -0.83
C11orf54-202ENST00000354421 PHF14O94880 888 aa9.88□□□□□ -0.83
C11orf54-202ENST00000354421 DNAJC5GQ8N7S2 189 aa9.88□□□□□ -0.83
C11orf54-202ENST00000354421 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
C11orf54-202ENST00000354421 PARD3Q8TEW0 1356 aa9.88□□□□□ -0.83
C11orf54-202ENST00000354421 GTPBP6O43824 516 aaPredicted RBP9.87□□□□□ -0.83
C11orf54-202ENST00000354421 NEFMP07197 916 aa9.87□□□□□ -0.83
C11orf54-202ENST00000354421 POLR3GLQ9BT43 218 aa9.87□□□□□ -0.83
C11orf54-202ENST00000354421 ARHGAP23Q9P227 1491 aa9.87□□□□□ -0.83
C11orf54-202ENST00000354421 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
C11orf54-202ENST00000354421 SOWAHBA6NEL2 793 aa9.87□□□□□ -0.83
C11orf54-202ENST00000354421 ZNF787Q6DD87 383 aa9.87□□□□□ -0.83
C11orf54-202ENST00000354421 NLRP13Q86W25 1043 aa9.87□□□□□ -0.83
C11orf54-202ENST00000354421 CARD11Q9BXL7 1154 aa9.87□□□□□ -0.83
C11orf54-202ENST00000354421 AATKQ6ZMQ8 1374 aa9.86□□□□□ -0.83
C11orf54-202ENST00000354421 PROX2Q3B8N5 592 aa9.86□□□□□ -0.83
C11orf54-202ENST00000354421 NPM2Q86SE8 214 aaKnown RBP9.86□□□□□ -0.83
C11orf54-202ENST00000354421 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
C11orf54-202ENST00000354421 UGGT1Q9NYU2 1555 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 LAS1LQ9Y4W2 734 aaKnown RBP9.85□□□□□ -0.83
C11orf54-202ENST00000354421 PLEKHH2Q8IVE3 1493 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 ABCC3O15438 1527 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 TNS2Q63HR2 1409 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 ANKRD50Q9ULJ7 1429 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 FAM83GA6ND36 823 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 COL9A1P20849 921 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 ZNF326Q5BKZ1 582 aaKnown RBP9.85□□□□□ -0.83
C11orf54-202ENST00000354421 FNBP4Q8N3X1 1017 aaPredicted RBP9.85□□□□□ -0.83
C11orf54-202ENST00000354421 ZNF775Q96BV0 537 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms