RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 PHACTR3Q96KR7 559 aa29.24■■■□□ 2.27
TNFRSF10B-202ENST00000347739 HSP90AB2PQ58FF8 381 aa29.23■■■□□ 2.27
TNFRSF10B-202ENST00000347739 CT47B1P0C2W7 299 aaPredicted RBP29.23■■■□□ 2.27
TNFRSF10B-202ENST00000347739 ARHGEF10O15013 1369 aa29.22■■■□□ 2.27
TNFRSF10B-202ENST00000347739 C1orf167Q5SNV9 1468 aa29.22■■■□□ 2.27
TNFRSF10B-202ENST00000347739 DLG5Q8TDM6 1919 aa29.21■■■□□ 2.27
TNFRSF10B-202ENST00000347739 PAK3O75914 559 aaPredicted RBP29.21■■■□□ 2.27
TNFRSF10B-202ENST00000347739 HSPA2P54652 639 aa29.21■■■□□ 2.27
TNFRSF10B-202ENST00000347739 FANCIQ9NVI1 1328 aa29.2■■■□□ 2.27
TNFRSF10B-202ENST00000347739 PSME1Q06323 249 aa29.2■■■□□ 2.27
TNFRSF10B-202ENST00000347739 SOX12O15370 315 aa29.2■■■□□ 2.26
TNFRSF10B-202ENST00000347739 STRCQ7RTU9 1775 aa29.2■■■□□ 2.26
TNFRSF10B-202ENST00000347739 TMEM94Q12767 1356 aa29.19■■■□□ 2.26
TNFRSF10B-202ENST00000347739 BCAR3O75815 825 aa29.19■■■□□ 2.26
TNFRSF10B-202ENST00000347739 CRBNQ96SW2 442 aa29.19■■■□□ 2.26
TNFRSF10B-202ENST00000347739 TRPM3Q9HCF6 1732 aaPredicted RBP29.18■■■□□ 2.26
TNFRSF10B-202ENST00000347739 C20orf194Q5TEA3 1177 aa29.18■■■□□ 2.26
TNFRSF10B-202ENST00000347739 NFAT5O94916 1531 aa29.18■■■□□ 2.26
TNFRSF10B-202ENST00000347739 RTL1A6NKG5 1358 aa29.18■■■□□ 2.26
TNFRSF10B-202ENST00000347739 AMPHP49418 695 aa29.17■■■□□ 2.26
TNFRSF10B-202ENST00000347739 RARSP54136 660 aaKnown RBP29.17■■■□□ 2.26
TNFRSF10B-202ENST00000347739 ORAI2Q96SN7 254 aa29.17■■■□□ 2.26
TNFRSF10B-202ENST00000347739 CALD1Q05682 793 aaKnown RBP29.17■■■□□ 2.26
TNFRSF10B-202ENST00000347739 LMOD3Q0VAK6 560 aa29.17■■■□□ 2.26
TNFRSF10B-202ENST00000347739 PHRF1Q9P1Y6 1649 aaKnown RBP29.16■■■□□ 2.26
TNFRSF10B-202ENST00000347739 SULT6B1Q6IMI4 303 aa29.16■■■□□ 2.26
TNFRSF10B-202ENST00000347739 LTN1O94822 1766 aa29.15■■■□□ 2.26
TNFRSF10B-202ENST00000347739 MST1RQ04912 1400 aa29.15■■■□□ 2.26
TNFRSF10B-202ENST00000347739 NUTM2GQ5VZR2 741 aa29.15■■■□□ 2.26
TNFRSF10B-202ENST00000347739 KDRP35968 1356 aa29.14■■■□□ 2.26
TNFRSF10B-202ENST00000347739 AEBP1Q8IUX7 1158 aa29.14■■■□□ 2.25
TNFRSF10B-202ENST00000347739 TSHZ2Q9NRE2 1034 aa29.14■■■□□ 2.25
TNFRSF10B-202ENST00000347739 HOXC9P31274 260 aa29.13■■■□□ 2.25
TNFRSF10B-202ENST00000347739 TSR2Q969E8 191 aaKnown RBP29.13■■■□□ 2.25
TNFRSF10B-202ENST00000347739 IGSF1Q8N6C5 1336 aa29.12■■■□□ 2.25
TNFRSF10B-202ENST00000347739 PDE3AQ14432 1141 aa29.11■■■□□ 2.25
TNFRSF10B-202ENST00000347739 SLIT3O75094 1523 aa29.11■■■□□ 2.25
TNFRSF10B-202ENST00000347739 FOXO3O43524 673 aa29.1■■■□□ 2.25
TNFRSF10B-202ENST00000347739 ATF3P18847 181 aa29.1■■■□□ 2.25
TNFRSF10B-202ENST00000347739 KCNH5Q8NCM2 988 aa29.1■■■□□ 2.25
TNFRSF10B-202ENST00000347739 EXOSC9Q06265 439 aaKnown RBP29.08■■■□□ 2.25
TNFRSF10B-202ENST00000347739 XIRP1Q702N8 1843 aaKnown RBP29.08■■■□□ 2.25
TNFRSF10B-202ENST00000347739 IFT57Q9NWB7 429 aa29.07■■■□□ 2.24
TNFRSF10B-202ENST00000347739 ALS2Q96Q42 1657 aa29.06■■■□□ 2.24
TNFRSF10B-202ENST00000347739 GNAI1P63096 354 aa29.06■■■□□ 2.24
TNFRSF10B-202ENST00000347739 CADPS2Q86UW7 1296 aa29.06■■■□□ 2.24
TNFRSF10B-202ENST00000347739 EYA1Q99502 592 aa29.06■■■□□ 2.24
TNFRSF10B-202ENST00000347739 ZNF853P0CG23 659 aa29.05■■■□□ 2.24
TNFRSF10B-202ENST00000347739 KRT28Q7Z3Y7 464 aa29.04■■■□□ 2.24
TNFRSF10B-202ENST00000347739 USP19O94966 1318 aa29.03■■■□□ 2.24
TNFRSF10B-202ENST00000347739 MSH6P52701 1360 aa29.03■■■□□ 2.24
TNFRSF10B-202ENST00000347739 CANXP27824 592 aaKnown RBP29.03■■■□□ 2.24
TNFRSF10B-202ENST00000347739 IP6K1Q92551 441 aa29.03■■■□□ 2.24
TNFRSF10B-202ENST00000347739 ZNF428Q96B54 188 aa29.01■■■□□ 2.23
TNFRSF10B-202ENST00000347739 CFAP44Q96MT7 982 aa29.01■■■□□ 2.23
TNFRSF10B-202ENST00000347739 THUMPD2Q9BTF0 503 aaKnown RBP29■■■□□ 2.23
TNFRSF10B-202ENST00000347739 XPCQ01831 940 aaPredicted RBP28.99■■■□□ 2.23
TNFRSF10B-202ENST00000347739 FRAT1Q92837 279 aaPredicted RBP28.98■■■□□ 2.23
TNFRSF10B-202ENST00000347739 FAM83GA6ND36 823 aa28.97■■■□□ 2.23
TNFRSF10B-202ENST00000347739 GCP02774 474 aa28.97■■■□□ 2.23
TNFRSF10B-202ENST00000347739 ALDH1L2Q3SY69 923 aa28.97■■■□□ 2.23
TNFRSF10B-202ENST00000347739 BCL2L13Q9BXK5 485 aa28.96■■■□□ 2.23
TNFRSF10B-202ENST00000347739 MBIPQ9NS73 344 aa28.95■■■□□ 2.23
TNFRSF10B-202ENST00000347739 LAS1LQ9Y4W2 734 aaKnown RBP28.95■■■□□ 2.23
TNFRSF10B-202ENST00000347739 GAS2L2Q8NHY3 880 aa28.94■■■□□ 2.22
TNFRSF10B-202ENST00000347739 SMC4Q9NTJ3 1288 aa28.94■■■□□ 2.22
TNFRSF10B-202ENST00000347739 NPHP3Q7Z494 1330 aa28.94■■■□□ 2.22
TNFRSF10B-202ENST00000347739 AAMPQ13685 434 aa28.94■■■□□ 2.22
TNFRSF10B-202ENST00000347739 ARHGEF25Q86VW2 580 aa28.94■■■□□ 2.22
TNFRSF10B-202ENST00000347739 SSH1Q8WYL5 1049 aa28.94■■■□□ 2.22
TNFRSF10B-202ENST00000347739 MTHFSDQ2M296 383 aaKnown RBP28.93■■■□□ 2.22
TNFRSF10B-202ENST00000347739 ZKSCAN2Q63HK3 967 aa28.93■■■□□ 2.22
TNFRSF10B-202ENST00000347739 MS4A1P11836 297 aa28.92■■■□□ 2.22
TNFRSF10B-202ENST00000347739 BRPF1P55201 1214 aaPredicted RBP28.92■■■□□ 2.22
TNFRSF10B-202ENST00000347739 PANK1Q8TE04 598 aa28.92■■■□□ 2.22
TNFRSF10B-202ENST00000347739 DCTN1Q14203 1278 aa28.91■■■□□ 2.22
TNFRSF10B-202ENST00000347739 MED1Q15648 1581 aaPredicted RBP28.91■■■□□ 2.22
TNFRSF10B-202ENST00000347739 KDM2BQ8NHM5 1336 aa28.91■■■□□ 2.22
TNFRSF10B-202ENST00000347739 LRRC37A3O60309 1634 aa28.9■■■□□ 2.22
TNFRSF10B-202ENST00000347739 PXDNQ92626 1479 aa28.9■■■□□ 2.22
TNFRSF10B-202ENST00000347739 KIF16BQ96L93 1317 aa28.9■■■□□ 2.22
TNFRSF10B-202ENST00000347739 CRB1P82279 1406 aa28.89■■■□□ 2.22
TNFRSF10B-202ENST00000347739 HTATSF1O43719 755 aaKnown RBP28.89■■■□□ 2.22
TNFRSF10B-202ENST00000347739 LMOD2Q6P5Q4 547 aa28.89■■■□□ 2.21
TNFRSF10B-202ENST00000347739 LTV1Q96GA3 475 aaPredicted RBP28.89■■■□□ 2.21
TNFRSF10B-202ENST00000347739 COG6Q9Y2V7 657 aa28.89■■■□□ 2.21
TNFRSF10B-202ENST00000347739 NCAPD2Q15021 1401 aa28.88■■■□□ 2.21
TNFRSF10B-202ENST00000347739 TNS3Q68CZ2 1445 aa28.88■■■□□ 2.21
TNFRSF10B-202ENST00000347739 CAMTA1Q9Y6Y1 1673 aa28.88■■■□□ 2.21
TNFRSF10B-202ENST00000347739 VAMP4O75379 141 aa28.88■■■□□ 2.21
TNFRSF10B-202ENST00000347739 ZNF335Q9H4Z2 1342 aaPredicted RBP28.88■■■□□ 2.21
TNFRSF10B-202ENST00000347739 CHL1O00533 1208 aa28.87■■■□□ 2.21
TNFRSF10B-202ENST00000347739 RLBP1P12271 317 aa28.87■■■□□ 2.21
TNFRSF10B-202ENST00000347739 CENPQQ7L2Z9 268 aaPredicted RBP28.87■■■□□ 2.21
TNFRSF10B-202ENST00000347739 MCM10Q7L590 875 aa28.86■■■□□ 2.21
TNFRSF10B-202ENST00000347739 RGPD2P0DJD1 1756 aa28.85■■■□□ 2.21
TNFRSF10B-202ENST00000347739 DZIP1LQ8IYY4 767 aaKnown RBP28.85■■■□□ 2.21
TNFRSF10B-202ENST00000347739 RTF1Q92541 710 aaKnown RBP28.85■■■□□ 2.21
TNFRSF10B-202ENST00000347739 CLUAP1Q96AJ1 413 aa28.85■■■□□ 2.21
TNFRSF10B-202ENST00000347739 ATF7IPQ6VMQ6 1270 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms