RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 BCL11BQ9C0K0 894 aaPredicted RBP25.65■■□□□ 1.7
SLX1A-202ENST00000345535 TRPM1Q7Z4N2 1603 aa25.64■■□□□ 1.7
SLX1A-202ENST00000345535 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
SLX1A-202ENST00000345535 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
SLX1A-202ENST00000345535 NINLQ9Y2I6 1382 aa25.62■■□□□ 1.69
SLX1A-202ENST00000345535 CSB-PGBD3P0DP91 1061 aa25.62■■□□□ 1.69
SLX1A-202ENST00000345535 ARHGEF25Q86VW2 580 aa25.62■■□□□ 1.69
SLX1A-202ENST00000345535 PEAK1Q9H792 1746 aa25.62■■□□□ 1.69
SLX1A-202ENST00000345535 LRRC37A3O60309 1634 aa25.62■■□□□ 1.69
SLX1A-202ENST00000345535 BCL9O00512 1426 aa25.62■■□□□ 1.69
SLX1A-202ENST00000345535 TTC21BQ7Z4L5 1316 aa25.62■■□□□ 1.69
SLX1A-202ENST00000345535 PIK3C2AO00443 1686 aa25.61■■□□□ 1.69
SLX1A-202ENST00000345535 CARD10Q9BWT7 1032 aa25.61■■□□□ 1.69
SLX1A-202ENST00000345535 COL18A1P39060 1754 aa25.59■■□□□ 1.69
SLX1A-202ENST00000345535 SBF2Q86WG5 1849 aa25.58■■□□□ 1.69
SLX1A-202ENST00000345535 AXIN2Q9Y2T1 843 aa25.58■■□□□ 1.69
SLX1A-202ENST00000345535 CCDC7Q96M83 1385 aa25.57■■□□□ 1.68
SLX1A-202ENST00000345535 EXOC5O00471 708 aa25.56■■□□□ 1.68
SLX1A-202ENST00000345535 YY1P25490 414 aa25.56■■□□□ 1.68
SLX1A-202ENST00000345535 ABCC6O95255 1503 aa25.56■■□□□ 1.68
SLX1A-202ENST00000345535 KTN1Q86UP2 1357 aaKnown RBP25.56■■□□□ 1.68
SLX1A-202ENST00000345535 AKAP12Q02952 1782 aa25.55■■□□□ 1.68
SLX1A-202ENST00000345535 WNK3Q9BYP7 1800 aa25.54■■□□□ 1.68
SLX1A-202ENST00000345535 MARCH10Q8NA82 808 aaPredicted RBP25.54■■□□□ 1.68
SLX1A-202ENST00000345535 SOX12O15370 315 aa25.53■■□□□ 1.68
SLX1A-202ENST00000345535 SBNO2Q9Y2G9 1366 aa25.51■■□□□ 1.67
SLX1A-202ENST00000345535 STK32BQ9NY57 414 aa25.5■■□□□ 1.67
SLX1A-202ENST00000345535 ANO8Q9HCE9 1232 aaPredicted RBP25.49■■□□□ 1.67
SLX1A-202ENST00000345535 NFAT5O94916 1531 aa25.48■■□□□ 1.67
SLX1A-202ENST00000345535 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
SLX1A-202ENST00000345535 TNS2Q63HR2 1409 aa25.47■■□□□ 1.67
SLX1A-202ENST00000345535 SIN3AQ96ST3 1273 aa25.47■■□□□ 1.67
SLX1A-202ENST00000345535 RGPD5Q99666 1765 aa25.46■■□□□ 1.67
SLX1A-202ENST00000345535 USP31Q70CQ4 1352 aa25.46■■□□□ 1.67
SLX1A-202ENST00000345535 TXNRD1Q16881 649 aa25.46■■□□□ 1.67
SLX1A-202ENST00000345535 HDGFL2Q7Z4V5 671 aaPredicted RBP25.45■■□□□ 1.66
SLX1A-202ENST00000345535 PROM2Q8N271 834 aa25.45■■□□□ 1.66
SLX1A-202ENST00000345535 CASZ1Q86V15 1759 aa25.44■■□□□ 1.66
SLX1A-202ENST00000345535 MON2Q7Z3U7 1717 aa25.44■■□□□ 1.66
SLX1A-202ENST00000345535 PTF1AQ7RTS3 328 aa25.44■■□□□ 1.66
SLX1A-202ENST00000345535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.43■■□□□ 1.66
SLX1A-202ENST00000345535 ERBB3P21860 1342 aa25.42■■□□□ 1.66
SLX1A-202ENST00000345535 SLC15A2Q16348 729 aa25.42■■□□□ 1.66
SLX1A-202ENST00000345535 NLRP2Q9NX02 1062 aa25.42■■□□□ 1.66
SLX1A-202ENST00000345535 ZBTB7AO95365 584 aa25.41■■□□□ 1.66
SLX1A-202ENST00000345535 IL2RBP14784 551 aa25.41■■□□□ 1.66
SLX1A-202ENST00000345535 CARD11Q9BXL7 1154 aa25.41■■□□□ 1.66
SLX1A-202ENST00000345535 TERF2IPQ9NYB0 399 aa25.41■■□□□ 1.66
SLX1A-202ENST00000345535 TMC1Q8TDI8 760 aa25.4■■□□□ 1.66
SLX1A-202ENST00000345535 USP54Q70EL1 1684 aa25.39■■□□□ 1.66
SLX1A-202ENST00000345535 MTFR1LQ9H019 292 aa25.39■■□□□ 1.66
SLX1A-202ENST00000345535 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
SLX1A-202ENST00000345535 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
SLX1A-202ENST00000345535 NHSQ6T4R5 1651 aa25.37■■□□□ 1.65
SLX1A-202ENST00000345535 SLC24A1O60721 1099 aa25.36■■□□□ 1.65
SLX1A-202ENST00000345535 NME9Q86XW9 330 aa25.36■■□□□ 1.65
SLX1A-202ENST00000345535 PTGER2P43116 358 aa25.35■■□□□ 1.65
SLX1A-202ENST00000345535 ANKRD24Q8TF21 1146 aa25.35■■□□□ 1.65
SLX1A-202ENST00000345535 ATF5Q9Y2D1 282 aaPredicted RBP25.35■■□□□ 1.65
SLX1A-202ENST00000345535 KAT6BQ8WYB5 2073 aa25.34■■□□□ 1.65
SLX1A-202ENST00000345535 PDGFDQ9GZP0 370 aaPredicted RBP25.34■■□□□ 1.65
SLX1A-202ENST00000345535 ACSBG1Q96GR2 724 aa25.33■■□□□ 1.65
SLX1A-202ENST00000345535 LTN1O94822 1766 aa25.33■■□□□ 1.65
SLX1A-202ENST00000345535 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
SLX1A-202ENST00000345535 SLC12A5Q9H2X9 1139 aa25.31■■□□□ 1.64
SLX1A-202ENST00000345535 MYOM1P52179 1685 aa25.29■■□□□ 1.64
SLX1A-202ENST00000345535 SYT17Q9BSW7 474 aa25.29■■□□□ 1.64
SLX1A-202ENST00000345535 TONSLQ96HA7 1378 aa25.29■■□□□ 1.64
SLX1A-202ENST00000345535 IP6K1Q92551 441 aa25.28■■□□□ 1.64
SLX1A-202ENST00000345535 FHDC1Q9C0D6 1143 aaPredicted RBP25.28■■□□□ 1.64
SLX1A-202ENST00000345535 SLC27A3Q5K4L6 730 aa25.27■■□□□ 1.64
SLX1A-202ENST00000345535 A0A1W2PP64 1363 aa25.27■■□□□ 1.64
SLX1A-202ENST00000345535 ARXQ96QS3 562 aa25.26■■□□□ 1.63
SLX1A-202ENST00000345535 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
SLX1A-202ENST00000345535 BTAF1O14981 1849 aa25.26■■□□□ 1.63
SLX1A-202ENST00000345535 SLC16A10Q8TF71 515 aa25.25■■□□□ 1.63
SLX1A-202ENST00000345535 MAP3K5Q99683 1374 aa25.24■■□□□ 1.63
SLX1A-202ENST00000345535 COG3Q96JB2 828 aa25.24■■□□□ 1.63
SLX1A-202ENST00000345535 SGIP1Q9BQI5 828 aa25.24■■□□□ 1.63
SLX1A-202ENST00000345535 DDX54Q8TDD1 881 aaKnown RBP25.22■■□□□ 1.63
SLX1A-202ENST00000345535 PAPPAQ13219 1627 aa25.22■■□□□ 1.63
SLX1A-202ENST00000345535 POLD1P28340 1107 aa25.2■■□□□ 1.62
SLX1A-202ENST00000345535 AMPHP49418 695 aa25.2■■□□□ 1.62
SLX1A-202ENST00000345535 HMGB2P26583 209 aaKnown RBP25.19■■□□□ 1.62
SLX1A-202ENST00000345535 LTV1Q96GA3 475 aaPredicted RBP25.19■■□□□ 1.62
SLX1A-202ENST00000345535 CHD4Q14839 1912 aa25.18■■□□□ 1.62
SLX1A-202ENST00000345535 UTRNP46939 3433 aa25.17■■□□□ 1.62
SLX1A-202ENST00000345535 ZNF827Q17R98 1081 aa25.17■■□□□ 1.62
SLX1A-202ENST00000345535 ZNF784Q8NCA9 323 aaPredicted RBP25.17■■□□□ 1.62
SLX1A-202ENST00000345535 LRRC4BQ9NT99 713 aa25.17■■□□□ 1.62
SLX1A-202ENST00000345535 AKT1S1Q96B36 256 aa25.16■■□□□ 1.62
SLX1A-202ENST00000345535 SYTL4Q96C24 671 aaPredicted RBP25.16■■□□□ 1.62
SLX1A-202ENST00000345535 ANKRD36BQ8N2N9 1353 aa25.16■■□□□ 1.62
SLX1A-202ENST00000345535 MAP3K19Q56UN5 1328 aa25.15■■□□□ 1.62
SLX1A-202ENST00000345535 HOXC9P31274 260 aa25.15■■□□□ 1.62
SLX1A-202ENST00000345535 RTL1A6NKG5 1358 aa25.15■■□□□ 1.62
SLX1A-202ENST00000345535 CGNL1Q0VF96 1302 aa25.14■■□□□ 1.62
SLX1A-202ENST00000345535 ZCRB1Q8TBF4 217 aaKnown RBP25.14■■□□□ 1.62
SLX1A-202ENST00000345535 TFCP2L1Q9NZI6 479 aa25.14■■□□□ 1.62
SLX1A-202ENST00000345535 QSER1Q2KHR3 1735 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms