RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 NUCB1Q02818 461 aa24.05■■□□□ 1.44
LYSMD4-202ENST00000344791 ANKRD26Q9UPS8 1709 aa24.04■■□□□ 1.44
LYSMD4-202ENST00000344791 MAP2P11137 1827 aaKnown RBP24.04■■□□□ 1.44
LYSMD4-202ENST00000344791 ZBTB7BO15156 539 aaPredicted RBP24.04■■□□□ 1.44
LYSMD4-202ENST00000344791 KIF20BQ96Q89 1820 aa24.04■■□□□ 1.44
LYSMD4-202ENST00000344791 CCDC61Q9Y6R9 512 aa24.03■■□□□ 1.44
LYSMD4-202ENST00000344791 SULT6B1Q6IMI4 303 aa24.01■■□□□ 1.43
LYSMD4-202ENST00000344791 FOXD4L1Q9NU39 408 aa24.01■■□□□ 1.43
LYSMD4-202ENST00000344791 APBB1O00213 710 aa24.01■■□□□ 1.43
LYSMD4-202ENST00000344791 IFT57Q9NWB7 429 aa24■■□□□ 1.43
LYSMD4-202ENST00000344791 MCM10Q7L590 875 aa24■■□□□ 1.43
LYSMD4-202ENST00000344791 ATP7BP35670 1465 aa23.99■■□□□ 1.43
LYSMD4-202ENST00000344791 CALD1Q05682 793 aaKnown RBP23.99■■□□□ 1.43
LYSMD4-202ENST00000344791 HSCBQ8IWL3 235 aa23.99■■□□□ 1.43
LYSMD4-202ENST00000344791 EDC4Q6P2E9 1401 aaKnown RBP23.99■■□□□ 1.43
LYSMD4-202ENST00000344791 SIRT2Q8IXJ6 389 aa23.98■■□□□ 1.43
LYSMD4-202ENST00000344791 PRR36Q9H6K5 1346 aa23.98■■□□□ 1.43
LYSMD4-202ENST00000344791 CPS1P31327 1500 aa23.98■■□□□ 1.43
LYSMD4-202ENST00000344791 ZMYM3Q14202 1370 aa23.97■■□□□ 1.43
LYSMD4-202ENST00000344791 CFAP44Q96MT7 982 aa23.97■■□□□ 1.43
LYSMD4-202ENST00000344791 MIS18AQ9NYP9 233 aa23.96■■□□□ 1.43
LYSMD4-202ENST00000344791 CPSF1Q10570 1443 aaKnown RBP23.96■■□□□ 1.43
LYSMD4-202ENST00000344791 SLC26A8Q96RN1 970 aa23.95■■□□□ 1.42
LYSMD4-202ENST00000344791 HSP90AB2PQ58FF8 381 aa23.94■■□□□ 1.42
LYSMD4-202ENST00000344791 ZNF853P0CG23 659 aa23.93■■□□□ 1.42
LYSMD4-202ENST00000344791 EIF4A2Q14240 407 aaKnown RBP23.93■■□□□ 1.42
LYSMD4-202ENST00000344791 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.93■■□□□ 1.42
LYSMD4-202ENST00000344791 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.92■■□□□ 1.42
LYSMD4-202ENST00000344791 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
LYSMD4-202ENST00000344791 RBM42Q9BTD8 480 aaKnown RBP23.92■■□□□ 1.42
LYSMD4-202ENST00000344791 LMOD3Q0VAK6 560 aa23.91■■□□□ 1.42
LYSMD4-202ENST00000344791 HSP90AA1P07900 732 aaKnown RBP23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 ANO8Q9HCE9 1232 aaPredicted RBP23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 ACEP12821 1306 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 MCM4P33991 863 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 CEBPAP49715 358 aaPredicted RBP23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 C16orf71Q8IYS4 520 aaPredicted RBP23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 GCC1Q96CN9 775 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 CHMP5Q9NZZ3 219 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 RIMBP3CA6NJZ7 1639 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 RIMBP3BA6NNM3 1639 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 RIMBP3Q9UFD9 1639 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 DIP2BQ9P265 1576 aa23.9■■□□□ 1.42
LYSMD4-202ENST00000344791 HSP90AB1P08238 724 aaKnown RBP23.89■■□□□ 1.42
LYSMD4-202ENST00000344791 TBC1D9Q6ZT07 1266 aa23.89■■□□□ 1.42
LYSMD4-202ENST00000344791 ROBO2Q9HCK4 1378 aa23.89■■□□□ 1.42
LYSMD4-202ENST00000344791 ABCC4O15439 1325 aa23.89■■□□□ 1.41
LYSMD4-202ENST00000344791 BMP2KLQ5H9B9 411 aa23.89■■□□□ 1.41
LYSMD4-202ENST00000344791 ARHGAP45Q92619 1136 aa23.89■■□□□ 1.41
LYSMD4-202ENST00000344791 DLC1Q96QB1 1528 aa23.89■■□□□ 1.41
LYSMD4-202ENST00000344791 CDK12Q9NYV4 1490 aaPredicted RBP23.88■■□□□ 1.41
LYSMD4-202ENST00000344791 FOXO3O43524 673 aa23.88■■□□□ 1.41
LYSMD4-202ENST00000344791 CD2BP2O95400 341 aaKnown RBP23.88■■□□□ 1.41
LYSMD4-202ENST00000344791 PPP6R1Q9UPN7 881 aa23.88■■□□□ 1.41
LYSMD4-202ENST00000344791 CDC42BPGQ6DT37 1551 aa23.88■■□□□ 1.41
LYSMD4-202ENST00000344791 SPATA31D1Q6ZQQ2 1576 aa23.87■■□□□ 1.41
LYSMD4-202ENST00000344791 BRPF1P55201 1214 aaPredicted RBP23.87■■□□□ 1.41
LYSMD4-202ENST00000344791 API5Q9BZZ5 524 aaKnown RBP23.87■■□□□ 1.41
LYSMD4-202ENST00000344791 TTC21BQ7Z4L5 1316 aa23.86■■□□□ 1.41
LYSMD4-202ENST00000344791 PTCH1Q13635 1447 aa23.86■■□□□ 1.41
LYSMD4-202ENST00000344791 OTUD7AQ8TE49 926 aaPredicted RBP23.85■■□□□ 1.41
LYSMD4-202ENST00000344791 ZNF692Q9BU19 519 aaPredicted RBP23.85■■□□□ 1.41
LYSMD4-202ENST00000344791 AATKQ6ZMQ8 1374 aa23.85■■□□□ 1.41
LYSMD4-202ENST00000344791 SMARCA5O60264 1052 aaPredicted RBP23.85■■□□□ 1.41
LYSMD4-202ENST00000344791 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
LYSMD4-202ENST00000344791 SLC4A10Q6U841 1118 aa23.85■■□□□ 1.41
LYSMD4-202ENST00000344791 CHMP4BQ9H444 224 aaKnown RBP23.85■■□□□ 1.41
LYSMD4-202ENST00000344791 NRXN3Q9Y4C0 1643 aa23.84■■□□□ 1.41
LYSMD4-202ENST00000344791 LTKP29376 864 aa23.84■■□□□ 1.41
LYSMD4-202ENST00000344791 RBM25P49756 843 aaKnown RBP23.84■■□□□ 1.41
LYSMD4-202ENST00000344791 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
LYSMD4-202ENST00000344791 NUTM2GQ5VZR2 741 aa23.83■■□□□ 1.41
LYSMD4-202ENST00000344791 GSPT1P15170 499 aaKnown RBP23.82■■□□□ 1.4
LYSMD4-202ENST00000344791 NECTIN2Q92692 538 aa23.82■■□□□ 1.4
LYSMD4-202ENST00000344791 DLG5Q8TDM6 1919 aa23.82■■□□□ 1.4
LYSMD4-202ENST00000344791 TRAK2O60296 914 aa23.81■■□□□ 1.4
LYSMD4-202ENST00000344791 TNRQ92752 1358 aa23.81■■□□□ 1.4
LYSMD4-202ENST00000344791 KIF2CQ99661 725 aa23.81■■□□□ 1.4
LYSMD4-202ENST00000344791 F6X3S4 739 aa23.81■■□□□ 1.4
LYSMD4-202ENST00000344791 SLC4A2P04920 1241 aa23.81■■□□□ 1.4
LYSMD4-202ENST00000344791 MEIS3Q99687 375 aa23.81■■□□□ 1.4
LYSMD4-202ENST00000344791 AGLP35573 1532 aa23.8■■□□□ 1.4
LYSMD4-202ENST00000344791 PIK3R4Q99570 1358 aa23.8■■□□□ 1.4
LYSMD4-202ENST00000344791 PLEKHM2Q8IWE5 1019 aa23.79■■□□□ 1.4
LYSMD4-202ENST00000344791 PANK2Q9BZ23 570 aa23.78■■□□□ 1.4
LYSMD4-202ENST00000344791 TMEM2Q9UHN6 1383 aa23.77■■□□□ 1.4
LYSMD4-202ENST00000344791 MSH6P52701 1360 aa23.77■■□□□ 1.4
LYSMD4-202ENST00000344791 GOLGA6L3A6NEY3 463 aa23.77■■□□□ 1.4
LYSMD4-202ENST00000344791 NGDNQ8NEJ9 315 aaKnown RBP23.77■■□□□ 1.4
LYSMD4-202ENST00000344791 TNPO1Q92973 898 aaKnown RBP23.77■■□□□ 1.4
LYSMD4-202ENST00000344791 CDC45O75419 566 aa23.76■■□□□ 1.39
LYSMD4-202ENST00000344791 G2E3Q7L622 706 aa23.76■■□□□ 1.39
LYSMD4-202ENST00000344791 CHL1O00533 1208 aa23.76■■□□□ 1.39
LYSMD4-202ENST00000344791 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
LYSMD4-202ENST00000344791 TSPYL4Q9UJ04 414 aa23.75■■□□□ 1.39
LYSMD4-202ENST00000344791 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
LYSMD4-202ENST00000344791 MTHFSDQ2M296 383 aaKnown RBP23.75■■□□□ 1.39
LYSMD4-202ENST00000344791 RTF1Q92541 710 aaKnown RBP23.75■■□□□ 1.39
LYSMD4-202ENST00000344791 LTV1Q96GA3 475 aaPredicted RBP23.74■■□□□ 1.39
LYSMD4-202ENST00000344791 DCTPP1Q9H773 170 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms