RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 NUTM2FA1L443 756 aa27.21■■□□□ 1.95
CCDC38-201ENST00000344280 LTKP29376 864 aa27.2■■□□□ 1.95
CCDC38-201ENST00000344280 C3P01024 1663 aa27.2■■□□□ 1.94
CCDC38-201ENST00000344280 IPO8O15397 1037 aaKnown RBP27.2■■□□□ 1.94
CCDC38-201ENST00000344280 VAMP4O75379 141 aa27.2■■□□□ 1.94
CCDC38-201ENST00000344280 ELL2O00472 640 aaPredicted RBP27.19■■□□□ 1.94
CCDC38-201ENST00000344280 AKAP12Q02952 1782 aa27.19■■□□□ 1.94
CCDC38-201ENST00000344280 FAM83GA6ND36 823 aa27.18■■□□□ 1.94
CCDC38-201ENST00000344280 MBIPQ9NS73 344 aa27.18■■□□□ 1.94
CCDC38-201ENST00000344280 ZNF853P0CG23 659 aa27.16■■□□□ 1.94
CCDC38-201ENST00000344280 CEBPAP49715 358 aaPredicted RBP27.16■■□□□ 1.94
CCDC38-201ENST00000344280 ZNF692Q9BU19 519 aaPredicted RBP27.16■■□□□ 1.94
CCDC38-201ENST00000344280 IFT57Q9NWB7 429 aa27.16■■□□□ 1.94
CCDC38-201ENST00000344280 ITSN1Q15811 1721 aa27.16■■□□□ 1.94
CCDC38-201ENST00000344280 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.16■■□□□ 1.94
CCDC38-201ENST00000344280 SMC5Q8IY18 1101 aa27.15■■□□□ 1.94
CCDC38-201ENST00000344280 DCTN1Q14203 1278 aa27.15■■□□□ 1.94
CCDC38-201ENST00000344280 MRPL50Q8N5N7 158 aaKnown RBP27.15■■□□□ 1.94
CCDC38-201ENST00000344280 DLG5Q8TDM6 1919 aa27.14■■□□□ 1.94
CCDC38-201ENST00000344280 BRPF1P55201 1214 aaPredicted RBP27.14■■□□□ 1.94
CCDC38-201ENST00000344280 GNAI1P63096 354 aa27.14■■□□□ 1.94
CCDC38-201ENST00000344280 AEBP1Q8IUX7 1158 aa27.13■■□□□ 1.93
CCDC38-201ENST00000344280 ACEP12821 1306 aa27.13■■□□□ 1.93
CCDC38-201ENST00000344280 ZNF428Q96B54 188 aa27.13■■□□□ 1.93
CCDC38-201ENST00000344280 TBC1D32Q96NH3 1257 aa27.13■■□□□ 1.93
CCDC38-201ENST00000344280 SLC26A8Q96RN1 970 aa27.13■■□□□ 1.93
CCDC38-201ENST00000344280 TTC21BQ7Z4L5 1316 aa27.12■■□□□ 1.93
CCDC38-201ENST00000344280 CALD1Q05682 793 aaKnown RBP27.12■■□□□ 1.93
CCDC38-201ENST00000344280 C8orf58Q8NAV2 365 aa27.11■■□□□ 1.93
CCDC38-201ENST00000344280 EIF4A2Q14240 407 aaKnown RBP27.1■■□□□ 1.93
CCDC38-201ENST00000344280 CFAP44Q96MT7 982 aa27.1■■□□□ 1.93
CCDC38-201ENST00000344280 PLEKHG1Q9ULL1 1385 aa27.09■■□□□ 1.93
CCDC38-201ENST00000344280 PTPRUQ92729 1446 aa27.09■■□□□ 1.93
CCDC38-201ENST00000344280 TWISTNBQ3B726 338 aaPredicted RBP27.08■■□□□ 1.93
CCDC38-201ENST00000344280 C1orf115Q9H7X2 142 aa27.08■■□□□ 1.93
CCDC38-201ENST00000344280 UPF2Q9HAU5 1272 aaKnown RBP27.08■■□□□ 1.93
CCDC38-201ENST00000344280 ZBTB7BO15156 539 aaPredicted RBP27.07■■□□□ 1.92
CCDC38-201ENST00000344280 FRAT2O75474 233 aaPredicted RBP27.07■■□□□ 1.92
CCDC38-201ENST00000344280 SULT6B1Q6IMI4 303 aa27.07■■□□□ 1.92
CCDC38-201ENST00000344280 PLPPR3Q6T4P5 718 aa27.07■■□□□ 1.92
CCDC38-201ENST00000344280 PTCH1Q13635 1447 aa27.06■■□□□ 1.92
CCDC38-201ENST00000344280 NRKQ7Z2Y5 1582 aa27.06■■□□□ 1.92
CCDC38-201ENST00000344280 OVOS2A0A0J9YW53 1432 aa27.05■■□□□ 1.92
CCDC38-201ENST00000344280 OVOS2Q6IE36 1432 aa27.05■■□□□ 1.92
CCDC38-201ENST00000344280 PLEKHG3A1L390 1219 aa27.05■■□□□ 1.92
CCDC38-201ENST00000344280 LMOD3Q0VAK6 560 aa27.05■■□□□ 1.92
CCDC38-201ENST00000344280 SOX12O15370 315 aa27.05■■□□□ 1.92
CCDC38-201ENST00000344280 ARHGAP45Q92619 1136 aa27.05■■□□□ 1.92
CCDC38-201ENST00000344280 TOPAZ1Q8N9V7 1692 aa27.05■■□□□ 1.92
CCDC38-201ENST00000344280 NUCB1Q02818 461 aa27.04■■□□□ 1.92
CCDC38-201ENST00000344280 HSP90AB2PQ58FF8 381 aa27.04■■□□□ 1.92
CCDC38-201ENST00000344280 LNPKQ9C0E8 428 aa27.04■■□□□ 1.92
CCDC38-201ENST00000344280 PIK3R4Q99570 1358 aa27.04■■□□□ 1.92
CCDC38-201ENST00000344280 USP6P35125 1406 aa27.04■■□□□ 1.92
CCDC38-201ENST00000344280 BECN1Q14457 450 aa27.02■■□□□ 1.92
CCDC38-201ENST00000344280 MFAP1P55081 439 aaKnown RBP27.01■■□□□ 1.91
CCDC38-201ENST00000344280 SLKQ9H2G2 1235 aaPredicted RBP27.01■■□□□ 1.91
CCDC38-201ENST00000344280 ABCC4O15439 1325 aa27.01■■□□□ 1.91
CCDC38-201ENST00000344280 PEAK1Q9H792 1746 aa27■■□□□ 1.91
CCDC38-201ENST00000344280 KRT24Q2M2I5 525 aa27■■□□□ 1.91
CCDC38-201ENST00000344280 TBC1D2Q9BYX2 928 aa27■■□□□ 1.91
CCDC38-201ENST00000344280 AMOTL2Q9Y2J4 779 aa27■■□□□ 1.91
CCDC38-201ENST00000344280 CHD1LQ86WJ1 897 aa27■■□□□ 1.91
CCDC38-201ENST00000344280 MCM10Q7L590 875 aa26.99■■□□□ 1.91
CCDC38-201ENST00000344280 SIRT2Q8IXJ6 389 aa26.99■■□□□ 1.91
CCDC38-201ENST00000344280 C22orf23Q9BZE7 217 aa26.97■■□□□ 1.91
CCDC38-201ENST00000344280 EID1Q9Y6B2 187 aa26.97■■□□□ 1.91
CCDC38-201ENST00000344280 SSH2Q76I76 1423 aa26.96■■□□□ 1.91
CCDC38-201ENST00000344280 USP31Q70CQ4 1352 aa26.95■■□□□ 1.9
CCDC38-201ENST00000344280 GSE1Q14687 1217 aa26.95■■□□□ 1.9
CCDC38-201ENST00000344280 ANKRD45Q5TZF3 282 aa26.95■■□□□ 1.9
CCDC38-201ENST00000344280 NALCNQ8IZF0 1738 aa26.94■■□□□ 1.9
CCDC38-201ENST00000344280 ANTXR1Q9H6X2 564 aa26.94■■□□□ 1.9
CCDC38-201ENST00000344280 MAP3K19Q56UN5 1328 aa26.92■■□□□ 1.9
CCDC38-201ENST00000344280 CHL1O00533 1208 aa26.91■■□□□ 1.9
CCDC38-201ENST00000344280 API5Q9BZZ5 524 aaKnown RBP26.91■■□□□ 1.9
CCDC38-201ENST00000344280 RGPD1P0DJD0 1748 aa26.9■■□□□ 1.9
CCDC38-201ENST00000344280 GCC1Q96CN9 775 aa26.9■■□□□ 1.9
CCDC38-201ENST00000344280 ARHGAP23Q9P227 1491 aa26.9■■□□□ 1.9
CCDC38-201ENST00000344280 SLIT1O75093 1534 aa26.9■■□□□ 1.9
CCDC38-201ENST00000344280 FOXO3O43524 673 aa26.9■■□□□ 1.9
CCDC38-201ENST00000344280 SPRYD3Q8NCJ5 442 aa26.9■■□□□ 1.9
CCDC38-201ENST00000344280 CHMP4BQ9H444 224 aaKnown RBP26.9■■□□□ 1.9
CCDC38-201ENST00000344280 TBX22Q9Y458 520 aa26.9■■□□□ 1.9
CCDC38-201ENST00000344280 RGPD8O14715 1765 aaPredicted RBP26.88■■□□□ 1.89
CCDC38-201ENST00000344280 MIS18AQ9NYP9 233 aa26.87■■□□□ 1.89
CCDC38-201ENST00000344280 NGDNQ8NEJ9 315 aaKnown RBP26.87■■□□□ 1.89
CCDC38-201ENST00000344280 RGS12O14924 1447 aa26.86■■□□□ 1.89
CCDC38-201ENST00000344280 BMP2KLQ5H9B9 411 aa26.85■■□□□ 1.89
CCDC38-201ENST00000344280 DIP2AQ14689 1571 aa26.85■■□□□ 1.89
CCDC38-201ENST00000344280 TTC21AQ8NDW8 1320 aa26.85■■□□□ 1.89
CCDC38-201ENST00000344280 CRB1P82279 1406 aa26.84■■□□□ 1.89
CCDC38-201ENST00000344280 RIMS1Q86UR5 1692 aaKnown RBP26.84■■□□□ 1.89
CCDC38-201ENST00000344280 MTHFSDQ2M296 383 aaKnown RBP26.84■■□□□ 1.89
CCDC38-201ENST00000344280 ARHGEF10O15013 1369 aa26.82■■□□□ 1.88
CCDC38-201ENST00000344280 INTS3Q68E01 1043 aaKnown RBP26.82■■□□□ 1.88
CCDC38-201ENST00000344280 FLT4P35916 1363 aa26.81■■□□□ 1.88
CCDC38-201ENST00000344280 EYA1Q99502 592 aa26.81■■□□□ 1.88
CCDC38-201ENST00000344280 SBNO1A3KN83 1393 aa26.81■■□□□ 1.88
CCDC38-201ENST00000344280 KIAA0232Q92628 1395 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms