RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MARCH10Q8NA82 808 aaPredicted RBP24.02■■□□□ 1.44
NECTIN1-202ENST00000340882 PPIP5K1Q6PFW1 1433 aa24.01■■□□□ 1.43
NECTIN1-202ENST00000340882 STAC3Q96MF2 364 aa24.01■■□□□ 1.43
NECTIN1-202ENST00000340882 SLIT3O75094 1523 aa24■■□□□ 1.43
NECTIN1-202ENST00000340882 AATKQ6ZMQ8 1374 aa24■■□□□ 1.43
NECTIN1-202ENST00000340882 AXIN2Q9Y2T1 843 aa23.99■■□□□ 1.43
NECTIN1-202ENST00000340882 KIAA1210Q9ULL0 1709 aa23.98■■□□□ 1.43
NECTIN1-202ENST00000340882 TOM1L2Q6ZVM7 507 aa23.98■■□□□ 1.43
NECTIN1-202ENST00000340882 FHDC1Q9C0D6 1143 aaPredicted RBP23.98■■□□□ 1.43
NECTIN1-202ENST00000340882 CABP2Q9NPB3 220 aa23.98■■□□□ 1.43
NECTIN1-202ENST00000340882 PIK3C2AO00443 1686 aa23.98■■□□□ 1.43
NECTIN1-202ENST00000340882 SYT17Q9BSW7 474 aa23.97■■□□□ 1.43
NECTIN1-202ENST00000340882 NLRP6P59044 892 aa23.96■■□□□ 1.43
NECTIN1-202ENST00000340882 TXNRD1Q16881 649 aa23.96■■□□□ 1.43
NECTIN1-202ENST00000340882 NBPF1Q3BBV0 1214 aa23.96■■□□□ 1.43
NECTIN1-202ENST00000340882 BCL9O00512 1426 aa23.95■■□□□ 1.42
NECTIN1-202ENST00000340882 SRPK2P78362 688 aaKnown RBP23.95■■□□□ 1.42
NECTIN1-202ENST00000340882 USP6P35125 1406 aa23.94■■□□□ 1.42
NECTIN1-202ENST00000340882 SLC15A2Q16348 729 aa23.94■■□□□ 1.42
NECTIN1-202ENST00000340882 SGIP1Q9BQI5 828 aa23.94■■□□□ 1.42
NECTIN1-202ENST00000340882 WDR17Q8IZU2 1322 aa23.93■■□□□ 1.42
NECTIN1-202ENST00000340882 STK32BQ9NY57 414 aa23.93■■□□□ 1.42
NECTIN1-202ENST00000340882 SENP3-EIF4A1A0A087X0R7 540 aa23.92■■□□□ 1.42
NECTIN1-202ENST00000340882 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
NECTIN1-202ENST00000340882 CABP1Q9NZU7 370 aa23.91■■□□□ 1.42
NECTIN1-202ENST00000340882 BRD4O60885 1362 aaPredicted RBP23.91■■□□□ 1.42
NECTIN1-202ENST00000340882 C1QTNF8P60827 252 aa23.89■■□□□ 1.41
NECTIN1-202ENST00000340882 CPSF1Q10570 1443 aaKnown RBP23.89■■□□□ 1.41
NECTIN1-202ENST00000340882 MTFR1LQ9H019 292 aa23.88■■□□□ 1.41
NECTIN1-202ENST00000340882 PAPPAQ13219 1627 aa23.88■■□□□ 1.41
NECTIN1-202ENST00000340882 NHSQ6T4R5 1651 aa23.87■■□□□ 1.41
NECTIN1-202ENST00000340882 CENPJQ9HC77 1338 aaPredicted RBP23.86■■□□□ 1.41
NECTIN1-202ENST00000340882 ARHGEF25Q86VW2 580 aa23.86■■□□□ 1.41
NECTIN1-202ENST00000340882 CDCA7Q9BWT1 371 aaPredicted RBP23.86■■□□□ 1.41
NECTIN1-202ENST00000340882 CARD10Q9BWT7 1032 aa23.85■■□□□ 1.41
NECTIN1-202ENST00000340882 SOX12O15370 315 aa23.84■■□□□ 1.41
NECTIN1-202ENST00000340882 EXOC5O00471 708 aa23.83■■□□□ 1.41
NECTIN1-202ENST00000340882 TRPM1Q7Z4N2 1603 aa23.83■■□□□ 1.41
NECTIN1-202ENST00000340882 BTAF1O14981 1849 aa23.82■■□□□ 1.4
NECTIN1-202ENST00000340882 KAT6BQ8WYB5 2073 aa23.82■■□□□ 1.4
NECTIN1-202ENST00000340882 ACSBG1Q96GR2 724 aa23.82■■□□□ 1.4
NECTIN1-202ENST00000340882 ARXQ96QS3 562 aa23.82■■□□□ 1.4
NECTIN1-202ENST00000340882 CSB-PGBD3P0DP91 1061 aa23.81■■□□□ 1.4
NECTIN1-202ENST00000340882 NFAT5O94916 1531 aa23.8■■□□□ 1.4
NECTIN1-202ENST00000340882 TNS2Q63HR2 1409 aa23.8■■□□□ 1.4
NECTIN1-202ENST00000340882 GOLGB1Q14789 3259 aaKnown RBP23.79■■□□□ 1.4
NECTIN1-202ENST00000340882 ZNF827Q17R98 1081 aa23.79■■□□□ 1.4
NECTIN1-202ENST00000340882 TTC21BQ7Z4L5 1316 aa23.79■■□□□ 1.4
NECTIN1-202ENST00000340882 MAP3K5Q99683 1374 aa23.78■■□□□ 1.4
NECTIN1-202ENST00000340882 CCDC7Q96M83 1385 aa23.76■■□□□ 1.39
NECTIN1-202ENST00000340882 ABCC6O95255 1503 aa23.75■■□□□ 1.39
NECTIN1-202ENST00000340882 KCNH5Q8NCM2 988 aa23.75■■□□□ 1.39
NECTIN1-202ENST00000340882 LRRC4BQ9NT99 713 aa23.75■■□□□ 1.39
NECTIN1-202ENST00000340882 COL24A1Q17RW2 1714 aa23.75■■□□□ 1.39
NECTIN1-202ENST00000340882 TUBGCP6Q96RT7 1819 aa23.75■■□□□ 1.39
NECTIN1-202ENST00000340882 CEP350Q5VT06 3117 aa23.74■■□□□ 1.39
NECTIN1-202ENST00000340882 GPR162Q16538 588 aa23.73■■□□□ 1.39
NECTIN1-202ENST00000340882 QSER1Q2KHR3 1735 aa23.73■■□□□ 1.39
NECTIN1-202ENST00000340882 IFFO2Q5TF58 517 aa23.72■■□□□ 1.39
NECTIN1-202ENST00000340882 SHANK3Q9BYB0 1731 aa23.72■■□□□ 1.39
NECTIN1-202ENST00000340882 LTN1O94822 1766 aa23.71■■□□□ 1.39
NECTIN1-202ENST00000340882 KLHL34Q8N239 644 aa23.69■■□□□ 1.38
NECTIN1-202ENST00000340882 MON2Q7Z3U7 1717 aa23.68■■□□□ 1.38
NECTIN1-202ENST00000340882 EVC2Q86UK5 1308 aa23.68■■□□□ 1.38
NECTIN1-202ENST00000340882 TTC21AQ8NDW8 1320 aa23.68■■□□□ 1.38
NECTIN1-202ENST00000340882 GIGYF1O75420 1035 aaPredicted RBP23.68■■□□□ 1.38
NECTIN1-202ENST00000340882 AKT1S1Q96B36 256 aa23.68■■□□□ 1.38
NECTIN1-202ENST00000340882 ZNF692Q9BU19 519 aaPredicted RBP23.68■■□□□ 1.38
NECTIN1-202ENST00000340882 ERBB3P21860 1342 aa23.66■■□□□ 1.38
NECTIN1-202ENST00000340882 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
NECTIN1-202ENST00000340882 NLGN2Q8NFZ4 835 aa23.66■■□□□ 1.38
NECTIN1-202ENST00000340882 NLRP2Q9NX02 1062 aa23.66■■□□□ 1.38
NECTIN1-202ENST00000340882 USP54Q70EL1 1684 aa23.65■■□□□ 1.38
NECTIN1-202ENST00000340882 PNPLA7Q6ZV29 1317 aa23.64■■□□□ 1.38
NECTIN1-202ENST00000340882 IL2RBP14784 551 aa23.64■■□□□ 1.37
NECTIN1-202ENST00000340882 KCNQ4P56696 695 aa23.64■■□□□ 1.37
NECTIN1-202ENST00000340882 KTN1Q86UP2 1357 aaKnown RBP23.64■■□□□ 1.37
NECTIN1-202ENST00000340882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.61■■□□□ 1.37
NECTIN1-202ENST00000340882 SLC16A10Q8TF71 515 aa23.61■■□□□ 1.37
NECTIN1-202ENST00000340882 LY75O60449 1722 aa23.59■■□□□ 1.37
NECTIN1-202ENST00000340882 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
NECTIN1-202ENST00000340882 NME9Q86XW9 330 aa23.59■■□□□ 1.37
NECTIN1-202ENST00000340882 ANKRD24Q8TF21 1146 aa23.59■■□□□ 1.37
NECTIN1-202ENST00000340882 USP31Q70CQ4 1352 aa23.59■■□□□ 1.37
NECTIN1-202ENST00000340882 POLD1P28340 1107 aa23.58■■□□□ 1.37
NECTIN1-202ENST00000340882 DOT1LQ8TEK3 1739 aa23.57■■□□□ 1.36
NECTIN1-202ENST00000340882 L3MBTL2Q969R5 705 aa23.57■■□□□ 1.36
NECTIN1-202ENST00000340882 CD163L1Q9NR16 1453 aa23.56■■□□□ 1.36
NECTIN1-202ENST00000340882 SLC27A3Q5K4L6 730 aa23.56■■□□□ 1.36
NECTIN1-202ENST00000340882 DDX54Q8TDD1 881 aaKnown RBP23.55■■□□□ 1.36
NECTIN1-202ENST00000340882 TFCP2L1Q9NZI6 479 aa23.55■■□□□ 1.36
NECTIN1-202ENST00000340882 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
NECTIN1-202ENST00000340882 RGPD2P0DJD1 1756 aa23.53■■□□□ 1.36
NECTIN1-202ENST00000340882 NSD2O96028 1365 aa23.52■■□□□ 1.36
NECTIN1-202ENST00000340882 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
NECTIN1-202ENST00000340882 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
NECTIN1-202ENST00000340882 SYTL4Q96C24 671 aaPredicted RBP23.49■■□□□ 1.35
NECTIN1-202ENST00000340882 ROCK2O75116 1388 aaKnown RBP23.49■■□□□ 1.35
NECTIN1-202ENST00000340882 FAM208AQ9UK61 1670 aaKnown RBP23.48■■□□□ 1.35
NECTIN1-202ENST00000340882 COL23A1Q86Y22 540 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms