RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 IRX6P78412 446 aaPredicted RBP27.87■■■□□ 2.05
VRK2-201ENST00000340157 TMPOP42166 694 aaKnown RBP27.87■■■□□ 2.05
VRK2-201ENST00000340157 SLIT3O75094 1523 aa27.86■■■□□ 2.05
VRK2-201ENST00000340157 MAPK8IP3Q9UPT6 1336 aa27.86■■■□□ 2.05
VRK2-201ENST00000340157 DDX17Q92841 729 aaKnown RBP27.85■■■□□ 2.05
VRK2-201ENST00000340157 PNNQ9H307 717 aaKnown RBP27.85■■■□□ 2.05
VRK2-201ENST00000340157 RCAN3Q9UKA8 241 aa27.85■■■□□ 2.05
VRK2-201ENST00000340157 KIF24Q5T7B8 1368 aa27.84■■■□□ 2.05
VRK2-201ENST00000340157 PHRF1Q9P1Y6 1649 aaKnown RBP27.83■■■□□ 2.05
VRK2-201ENST00000340157 PHACTR3Q96KR7 559 aa27.83■■■□□ 2.05
VRK2-201ENST00000340157 E9PSI1 815 aa27.83■■■□□ 2.04
VRK2-201ENST00000340157 TRIM35Q9UPQ4 493 aa27.83■■■□□ 2.04
VRK2-201ENST00000340157 DLG5Q8TDM6 1919 aa27.83■■■□□ 2.04
VRK2-201ENST00000340157 AMPHP49418 695 aa27.82■■■□□ 2.04
VRK2-201ENST00000340157 HOXC9P31274 260 aa27.81■■■□□ 2.04
VRK2-201ENST00000340157 PXDNQ92626 1479 aa27.81■■■□□ 2.04
VRK2-201ENST00000340157 AEBP1Q8IUX7 1158 aa27.81■■■□□ 2.04
VRK2-201ENST00000340157 WDR63Q8IWG1 891 aa27.81■■■□□ 2.04
VRK2-201ENST00000340157 USP19O94966 1318 aa27.8■■■□□ 2.04
VRK2-201ENST00000340157 MED1Q15648 1581 aaPredicted RBP27.79■■■□□ 2.04
VRK2-201ENST00000340157 RTL1A6NKG5 1358 aa27.78■■■□□ 2.04
VRK2-201ENST00000340157 BRINP3Q76B58 766 aa27.78■■■□□ 2.04
VRK2-201ENST00000340157 SULT6B1Q6IMI4 303 aa27.77■■■□□ 2.04
VRK2-201ENST00000340157 NPHP3Q7Z494 1330 aa27.77■■■□□ 2.04
VRK2-201ENST00000340157 ARHGEF10O15013 1369 aa27.77■■■□□ 2.04
VRK2-201ENST00000340157 RIPK4P57078 832 aa27.76■■■□□ 2.04
VRK2-201ENST00000340157 KCNH5Q8NCM2 988 aa27.76■■■□□ 2.04
VRK2-201ENST00000340157 LMOD2Q6P5Q4 547 aa27.76■■■□□ 2.03
VRK2-201ENST00000340157 GCP02774 474 aa27.74■■■□□ 2.03
VRK2-201ENST00000340157 NFE2L2Q16236 605 aa27.74■■■□□ 2.03
VRK2-201ENST00000340157 SLAIN2Q9P270 581 aa27.74■■■□□ 2.03
VRK2-201ENST00000340157 CRYBG1Q9Y4K1 1723 aa27.74■■■□□ 2.03
VRK2-201ENST00000340157 IGSF1Q8N6C5 1336 aa27.73■■■□□ 2.03
VRK2-201ENST00000340157 RRP1P56182 461 aaKnown RBP27.73■■■□□ 2.03
VRK2-201ENST00000340157 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
VRK2-201ENST00000340157 KDRP35968 1356 aa27.73■■■□□ 2.03
VRK2-201ENST00000340157 EYA1Q99502 592 aa27.72■■■□□ 2.03
VRK2-201ENST00000340157 IP6K1Q92551 441 aa27.72■■■□□ 2.03
VRK2-201ENST00000340157 NEFMP07197 916 aa27.71■■■□□ 2.03
VRK2-201ENST00000340157 PLEKHG5O94827 1062 aa27.7■■■□□ 2.02
VRK2-201ENST00000340157 ARHGEF25Q86VW2 580 aa27.7■■■□□ 2.02
VRK2-201ENST00000340157 RGPD2P0DJD1 1756 aa27.7■■■□□ 2.02
VRK2-201ENST00000340157 LTBP4Q8N2S1 1624 aa27.69■■■□□ 2.02
VRK2-201ENST00000340157 SPATA31A3Q5VYP0 1347 aa27.68■■■□□ 2.02
VRK2-201ENST00000340157 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
VRK2-201ENST00000340157 ERICH6BQ5W0A0 696 aa27.67■■■□□ 2.02
VRK2-201ENST00000340157 NHSL1Q5SYE7 1610 aa27.66■■■□□ 2.02
VRK2-201ENST00000340157 IL16Q14005 1332 aa27.66■■■□□ 2.02
VRK2-201ENST00000340157 LTV1Q96GA3 475 aaPredicted RBP27.66■■■□□ 2.02
VRK2-201ENST00000340157 SOS2Q07890 1332 aaPredicted RBP27.63■■■□□ 2.01
VRK2-201ENST00000340157 ZBTB7CA1YPR0 619 aa27.63■■■□□ 2.01
VRK2-201ENST00000340157 MYH16Q9H6N6 1097 aa27.63■■■□□ 2.01
VRK2-201ENST00000340157 FANCIQ9NVI1 1328 aa27.63■■■□□ 2.01
VRK2-201ENST00000340157 THUMPD2Q9BTF0 503 aaKnown RBP27.62■■■□□ 2.01
VRK2-201ENST00000340157 COL18A1P39060 1754 aa27.62■■■□□ 2.01
VRK2-201ENST00000340157 PLIN1O60240 522 aa27.61■■■□□ 2.01
VRK2-201ENST00000340157 TSR2Q969E8 191 aaKnown RBP27.61■■■□□ 2.01
VRK2-201ENST00000340157 CABLES1Q8TDN4 633 aa27.59■■■□□ 2.01
VRK2-201ENST00000340157 AXIN2Q9Y2T1 843 aa27.59■■■□□ 2.01
VRK2-201ENST00000340157 CAMTA1Q9Y6Y1 1673 aa27.58■■■□□ 2.01
VRK2-201ENST00000340157 FAM83GA6ND36 823 aa27.58■■■□□ 2.01
VRK2-201ENST00000340157 ZC3H6P61129 1189 aaKnown RBP27.58■■■□□ 2.01
VRK2-201ENST00000340157 NBPF6Q5VWK0 638 aa27.57■■■□□ 2
VRK2-201ENST00000340157 NBPF4Q96M43 638 aa27.57■■■□□ 2
VRK2-201ENST00000340157 USHBP1Q8N6Y0 703 aa27.57■■■□□ 2
VRK2-201ENST00000340157 ABCA3Q99758 1704 aa27.56■■■□□ 2
VRK2-201ENST00000340157 LMOD3Q0VAK6 560 aa27.56■■■□□ 2
VRK2-201ENST00000340157 MTHFSDQ2M296 383 aaKnown RBP27.56■■■□□ 2
VRK2-201ENST00000340157 NCAPD2Q15021 1401 aa27.56■■■□□ 2
VRK2-201ENST00000340157 BCAR3O75815 825 aa27.55■■■□□ 2
VRK2-201ENST00000340157 DCTN1Q14203 1278 aa27.55■■■□□ 2
VRK2-201ENST00000340157 PPP4R2Q9NY27 417 aa27.55■■■□□ 2
VRK2-201ENST00000340157 LRRC59Q96AG4 307 aaKnown RBP27.54■■■□□ 2
VRK2-201ENST00000340157 ROBO1Q9Y6N7 1651 aa27.53■■■□□ 2
VRK2-201ENST00000340157 LMO7Q8WWI1 1683 aa27.53■■■□□ 2
VRK2-201ENST00000340157 ZNF853P0CG23 659 aa27.53■■■□□ 2
VRK2-201ENST00000340157 EXOSC9Q06265 439 aaKnown RBP27.52■■■□□ 2
VRK2-201ENST00000340157 ANKRD24Q8TF21 1146 aa27.52■■■□□ 2
VRK2-201ENST00000340157 RARSP54136 660 aaKnown RBP27.51■■□□□ 1.99
VRK2-201ENST00000340157 C20orf194Q5TEA3 1177 aa27.51■■□□□ 1.99
VRK2-201ENST00000340157 ABCC6O95255 1503 aa27.51■■□□□ 1.99
VRK2-201ENST00000340157 CALD1Q05682 793 aaKnown RBP27.5■■□□□ 1.99
VRK2-201ENST00000340157 IFT57Q9NWB7 429 aa27.5■■□□□ 1.99
VRK2-201ENST00000340157 EXOC6Q8TAG9 804 aa27.49■■□□□ 1.99
VRK2-201ENST00000340157 CPDO75976 1380 aa27.49■■□□□ 1.99
VRK2-201ENST00000340157 ERBB3P21860 1342 aa27.49■■□□□ 1.99
VRK2-201ENST00000340157 MCM10Q7L590 875 aa27.49■■□□□ 1.99
VRK2-201ENST00000340157 KIAA0232Q92628 1395 aa27.48■■□□□ 1.99
VRK2-201ENST00000340157 LAS1LQ9Y4W2 734 aaKnown RBP27.48■■□□□ 1.99
VRK2-201ENST00000340157 LRRC37A3O60309 1634 aa27.48■■□□□ 1.99
VRK2-201ENST00000340157 GAS2L2Q8NHY3 880 aa27.47■■□□□ 1.99
VRK2-201ENST00000340157 GNAI1P63096 354 aa27.47■■□□□ 1.99
VRK2-201ENST00000340157 MBIPQ9NS73 344 aa27.47■■□□□ 1.99
VRK2-201ENST00000340157 CT47B1P0C2W7 299 aaPredicted RBP27.46■■□□□ 1.99
VRK2-201ENST00000340157 CFAP44Q96MT7 982 aa27.46■■□□□ 1.99
VRK2-201ENST00000340157 CRB1P82279 1406 aa27.46■■□□□ 1.99
VRK2-201ENST00000340157 FAM208AQ9UK61 1670 aaKnown RBP27.45■■□□□ 1.99
VRK2-201ENST00000340157 AHDC1Q5TGY3 1603 aaPredicted RBP27.45■■□□□ 1.98
VRK2-201ENST00000340157 CHRNA2Q15822 529 aa27.44■■□□□ 1.98
VRK2-201ENST00000340157 B4GALNT3Q6L9W6 998 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms