RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 ERICH6Q7L0X2 663 aa22.26■■□□□ 1.15
ATAD3A-201ENST00000339113 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
ATAD3A-201ENST00000339113 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
ATAD3A-201ENST00000339113 AEBP1Q8IUX7 1158 aa22.26■■□□□ 1.15
ATAD3A-201ENST00000339113 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
ATAD3A-201ENST00000339113 NEFMP07197 916 aa22.24■■□□□ 1.15
ATAD3A-201ENST00000339113 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
ATAD3A-201ENST00000339113 RARSP54136 660 aaKnown RBP22.23■■□□□ 1.15
ATAD3A-201ENST00000339113 SULT6B1Q6IMI4 303 aa22.23■■□□□ 1.15
ATAD3A-201ENST00000339113 PSME1Q06323 249 aa22.22■■□□□ 1.15
ATAD3A-201ENST00000339113 IL16Q14005 1332 aa22.21■■□□□ 1.15
ATAD3A-201ENST00000339113 MARF1Q9Y4F3 1742 aaKnown RBP22.21■■□□□ 1.15
ATAD3A-201ENST00000339113 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
ATAD3A-201ENST00000339113 FOXO3O43524 673 aa22.2■■□□□ 1.15
ATAD3A-201ENST00000339113 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.15
ATAD3A-201ENST00000339113 AMPHP49418 695 aa22.2■■□□□ 1.14
ATAD3A-201ENST00000339113 C19orf44Q9H6X5 657 aa22.2■■□□□ 1.14
ATAD3A-201ENST00000339113 XPCQ01831 940 aaPredicted RBP22.19■■□□□ 1.14
ATAD3A-201ENST00000339113 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
ATAD3A-201ENST00000339113 FLT4P35916 1363 aa22.19■■□□□ 1.14
ATAD3A-201ENST00000339113 BCL2L13Q9BXK5 485 aa22.18■■□□□ 1.14
ATAD3A-201ENST00000339113 TMEM94Q12767 1356 aa22.17■■□□□ 1.14
ATAD3A-201ENST00000339113 STRCP1A6NGW2 1772 aa22.17■■□□□ 1.14
ATAD3A-201ENST00000339113 FAM83GA6ND36 823 aa22.15■■□□□ 1.14
ATAD3A-201ENST00000339113 HOXC9P31274 260 aa22.15■■□□□ 1.14
ATAD3A-201ENST00000339113 FRAT1Q92837 279 aaPredicted RBP22.15■■□□□ 1.14
ATAD3A-201ENST00000339113 RGPD1P0DJD0 1748 aa22.15■■□□□ 1.14
ATAD3A-201ENST00000339113 USP54Q70EL1 1684 aa22.14■■□□□ 1.14
ATAD3A-201ENST00000339113 C1orf167Q5SNV9 1468 aa22.14■■□□□ 1.14
ATAD3A-201ENST00000339113 EYA1Q99502 592 aa22.14■■□□□ 1.13
ATAD3A-201ENST00000339113 LAS1LQ9Y4W2 734 aaKnown RBP22.14■■□□□ 1.13
ATAD3A-201ENST00000339113 LMTK3Q96Q04 1460 aa22.13■■□□□ 1.13
ATAD3A-201ENST00000339113 DCTN1Q14203 1278 aa22.13■■□□□ 1.13
ATAD3A-201ENST00000339113 PANK1Q8TE04 598 aa22.12■■□□□ 1.13
ATAD3A-201ENST00000339113 TNNQ9UQP3 1299 aa22.12■■□□□ 1.13
ATAD3A-201ENST00000339113 CANXP27824 592 aaKnown RBP22.11■■□□□ 1.13
ATAD3A-201ENST00000339113 ARHGEF10O15013 1369 aa22.11■■□□□ 1.13
ATAD3A-201ENST00000339113 CT47B1P0C2W7 299 aaPredicted RBP22.11■■□□□ 1.13
ATAD3A-201ENST00000339113 PDE3AQ14432 1141 aa22.11■■□□□ 1.13
ATAD3A-201ENST00000339113 PLEKHG5O94827 1062 aa22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 ATF3P18847 181 aa22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 KRT28Q7Z3Y7 464 aa22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 DLG5Q8TDM6 1919 aa22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 KIF24Q5T7B8 1368 aa22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 ZNF853P0CG23 659 aa22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 LTV1Q96GA3 475 aaPredicted RBP22.09■■□□□ 1.13
ATAD3A-201ENST00000339113 MST1RQ04912 1400 aa22.08■■□□□ 1.13
ATAD3A-201ENST00000339113 LMOD3Q0VAK6 560 aa22.08■■□□□ 1.12
ATAD3A-201ENST00000339113 SSH1Q8WYL5 1049 aa22.08■■□□□ 1.12
ATAD3A-201ENST00000339113 KDRP35968 1356 aa22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 RLBP1P12271 317 aa22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 LMOD2Q6P5Q4 547 aa22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 IFT57Q9NWB7 429 aa22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 COG6Q9Y2V7 657 aa22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 NFAT5O94916 1531 aa22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 CALD1Q05682 793 aaKnown RBP22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 DDX17Q92841 729 aaKnown RBP22.07■■□□□ 1.12
ATAD3A-201ENST00000339113 GNAI1P63096 354 aa22.06■■□□□ 1.12
ATAD3A-201ENST00000339113 MBIPQ9NS73 344 aa22.06■■□□□ 1.12
ATAD3A-201ENST00000339113 STRCQ7RTU9 1775 aa22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 MTHFSDQ2M296 383 aaKnown RBP22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 IP6K1Q92551 441 aa22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 SMC4Q9NTJ3 1288 aa22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 NCOA3Q9Y6Q9 1424 aa22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 ZBTB7CA1YPR0 619 aa22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 MCM10Q7L590 875 aa22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 CFAP44Q96MT7 982 aa22.05■■□□□ 1.12
ATAD3A-201ENST00000339113 GCP02774 474 aa22.04■■□□□ 1.12
ATAD3A-201ENST00000339113 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
ATAD3A-201ENST00000339113 CLUAP1Q96AJ1 413 aa22.04■■□□□ 1.12
ATAD3A-201ENST00000339113 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
ATAD3A-201ENST00000339113 NOP58Q9Y2X3 529 aaKnown RBP22.03■■□□□ 1.12
ATAD3A-201ENST00000339113 RTL1A6NKG5 1358 aa22.02■■□□□ 1.12
ATAD3A-201ENST00000339113 TRPM3Q9HCF6 1732 aaPredicted RBP22.02■■□□□ 1.12
ATAD3A-201ENST00000339113 DCCP43146 1447 aa22.02■■□□□ 1.12
ATAD3A-201ENST00000339113 LTN1O94822 1766 aa22.02■■□□□ 1.11
ATAD3A-201ENST00000339113 CADPS2Q86UW7 1296 aa22.01■■□□□ 1.11
ATAD3A-201ENST00000339113 USHBP1Q8N6Y0 703 aa22.01■■□□□ 1.11
ATAD3A-201ENST00000339113 KDM2BQ8NHM5 1336 aa22.01■■□□□ 1.11
ATAD3A-201ENST00000339113 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
ATAD3A-201ENST00000339113 VAMP4O75379 141 aa22.01■■□□□ 1.11
ATAD3A-201ENST00000339113 KIF1AQ12756 1690 aa22■■□□□ 1.11
ATAD3A-201ENST00000339113 ZKSCAN2Q63HK3 967 aa22■■□□□ 1.11
ATAD3A-201ENST00000339113 ARHGEF25Q86VW2 580 aa22■■□□□ 1.11
ATAD3A-201ENST00000339113 SKAP1Q86WV1 359 aa22■■□□□ 1.11
ATAD3A-201ENST00000339113 ZNF335Q9H4Z2 1342 aaPredicted RBP21.99■■□□□ 1.11
ATAD3A-201ENST00000339113 C8orf58Q8NAV2 365 aa21.99■■□□□ 1.11
ATAD3A-201ENST00000339113 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
ATAD3A-201ENST00000339113 USP19O94966 1318 aa21.99■■□□□ 1.11
ATAD3A-201ENST00000339113 SLIT3O75094 1523 aa21.98■■□□□ 1.11
ATAD3A-201ENST00000339113 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
ATAD3A-201ENST00000339113 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
ATAD3A-201ENST00000339113 MSH6P52701 1360 aa21.98■■□□□ 1.11
ATAD3A-201ENST00000339113 TRIM27P14373 513 aa21.97■■□□□ 1.11
ATAD3A-201ENST00000339113 ALDH1L2Q3SY69 923 aa21.97■■□□□ 1.11
ATAD3A-201ENST00000339113 CHL1O00533 1208 aa21.96■■□□□ 1.11
ATAD3A-201ENST00000339113 DZIP1LQ8IYY4 767 aaKnown RBP21.96■■□□□ 1.11
ATAD3A-201ENST00000339113 XIRP1Q702N8 1843 aaKnown RBP21.95■■□□□ 1.1
ATAD3A-201ENST00000339113 CRB1P82279 1406 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms