RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RARSP54136 660 aaKnown RBP23.86■■□□□ 1.41
PSPC1-201ENST00000338910 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
PSPC1-201ENST00000338910 RIPK4P57078 832 aa23.86■■□□□ 1.41
PSPC1-201ENST00000338910 TTC21BQ7Z4L5 1316 aa23.85■■□□□ 1.41
PSPC1-201ENST00000338910 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
PSPC1-201ENST00000338910 RRS1Q15050 365 aaKnown RBP23.84■■□□□ 1.41
PSPC1-201ENST00000338910 TSR2Q969E8 191 aaKnown RBP23.84■■□□□ 1.41
PSPC1-201ENST00000338910 PNNQ9H307 717 aaKnown RBP23.84■■□□□ 1.41
PSPC1-201ENST00000338910 RRAGDQ9NQL2 400 aaPredicted RBP23.84■■□□□ 1.41
PSPC1-201ENST00000338910 FCHSD2O94868 740 aa23.84■■□□□ 1.41
PSPC1-201ENST00000338910 L1TD1Q5T7N2 865 aaKnown RBP23.84■■□□□ 1.41
PSPC1-201ENST00000338910 ANTXR1Q9H6X2 564 aa23.84■■□□□ 1.41
PSPC1-201ENST00000338910 HMOX1P09601 288 aa23.83■■□□□ 1.41
PSPC1-201ENST00000338910 PRKAR2BP31323 418 aa23.83■■□□□ 1.41
PSPC1-201ENST00000338910 PANK1Q8TE04 598 aa23.83■■□□□ 1.41
PSPC1-201ENST00000338910 USP6P35125 1406 aa23.83■■□□□ 1.4
PSPC1-201ENST00000338910 PDE3AQ14432 1141 aa23.82■■□□□ 1.4
PSPC1-201ENST00000338910 SLKQ9H2G2 1235 aaPredicted RBP23.82■■□□□ 1.4
PSPC1-201ENST00000338910 RBM33Q96EV2 1170 aaKnown RBP23.81■■□□□ 1.4
PSPC1-201ENST00000338910 RGPD8O14715 1765 aaPredicted RBP23.81■■□□□ 1.4
PSPC1-201ENST00000338910 AATKQ6ZMQ8 1374 aa23.81■■□□□ 1.4
PSPC1-201ENST00000338910 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
PSPC1-201ENST00000338910 NRKQ7Z2Y5 1582 aa23.79■■□□□ 1.4
PSPC1-201ENST00000338910 NGDNQ8NEJ9 315 aaKnown RBP23.79■■□□□ 1.4
PSPC1-201ENST00000338910 CLUAP1Q96AJ1 413 aa23.79■■□□□ 1.4
PSPC1-201ENST00000338910 IL13P35225 146 aa23.79■■□□□ 1.4
PSPC1-201ENST00000338910 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
PSPC1-201ENST00000338910 CHD2O14647 1828 aaKnown RBP23.78■■□□□ 1.4
PSPC1-201ENST00000338910 EXOSC9Q06265 439 aaKnown RBP23.77■■□□□ 1.4
PSPC1-201ENST00000338910 TNNQ9UQP3 1299 aa23.76■■□□□ 1.39
PSPC1-201ENST00000338910 SSH2Q76I76 1423 aa23.75■■□□□ 1.39
PSPC1-201ENST00000338910 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
PSPC1-201ENST00000338910 NPHP4O75161 1426 aaPredicted RBP23.74■■□□□ 1.39
PSPC1-201ENST00000338910 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
PSPC1-201ENST00000338910 OVOS2A0A0J9YW53 1432 aa23.74■■□□□ 1.39
PSPC1-201ENST00000338910 OVOS2Q6IE36 1432 aa23.74■■□□□ 1.39
PSPC1-201ENST00000338910 TBC1D32Q96NH3 1257 aa23.73■■□□□ 1.39
PSPC1-201ENST00000338910 RLBP1P12271 317 aa23.73■■□□□ 1.39
PSPC1-201ENST00000338910 SOX12O15370 315 aa23.72■■□□□ 1.39
PSPC1-201ENST00000338910 IL16Q14005 1332 aa23.72■■□□□ 1.39
PSPC1-201ENST00000338910 ANKARQ7Z5J8 1434 aa23.71■■□□□ 1.39
PSPC1-201ENST00000338910 TBC1D2Q9BYX2 928 aa23.71■■□□□ 1.39
PSPC1-201ENST00000338910 FSD2A1L4K1 749 aa23.7■■□□□ 1.38
PSPC1-201ENST00000338910 TTC21AQ8NDW8 1320 aa23.7■■□□□ 1.38
PSPC1-201ENST00000338910 NFE2L2Q16236 605 aa23.7■■□□□ 1.38
PSPC1-201ENST00000338910 NALCNQ8IZF0 1738 aa23.69■■□□□ 1.38
PSPC1-201ENST00000338910 FMN2Q9NZ56 1722 aa23.69■■□□□ 1.38
PSPC1-201ENST00000338910 XRCC6P12956 609 aaKnown RBP eCLIP23.69■■□□□ 1.389e-14■■□□□ 11.4
PSPC1-201ENST00000338910 THUMPD2Q9BTF0 503 aaKnown RBP23.69■■□□□ 1.38
PSPC1-201ENST00000338910 CT47B1P0C2W7 299 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-201ENST00000338910 UPF2Q9HAU5 1272 aaKnown RBP23.69■■□□□ 1.38
PSPC1-201ENST00000338910 SMC4Q9NTJ3 1288 aa23.68■■□□□ 1.38
PSPC1-201ENST00000338910 SSH1Q8WYL5 1049 aa23.67■■□□□ 1.38
PSPC1-201ENST00000338910 USP31Q70CQ4 1352 aa23.66■■□□□ 1.38
PSPC1-201ENST00000338910 GOLGA6L3A6NEY3 463 aa23.66■■□□□ 1.38
PSPC1-201ENST00000338910 AAMPQ13685 434 aa23.65■■□□□ 1.38
PSPC1-201ENST00000338910 ZKSCAN2Q63HK3 967 aa23.65■■□□□ 1.38
PSPC1-201ENST00000338910 EIF4A2Q14240 407 aaKnown RBP23.64■■□□□ 1.38
PSPC1-201ENST00000338910 HSP90AB2PQ58FF8 381 aa23.64■■□□□ 1.37
PSPC1-201ENST00000338910 C14orf37Q86TY3 774 aa23.64■■□□□ 1.37
PSPC1-201ENST00000338910 MCM4P33991 863 aa23.63■■□□□ 1.37
PSPC1-201ENST00000338910 NLRP6P59044 892 aa23.63■■□□□ 1.37
PSPC1-201ENST00000338910 NUTM2GQ5VZR2 741 aa23.63■■□□□ 1.37
PSPC1-201ENST00000338910 CLCN1P35523 988 aa23.62■■□□□ 1.37
PSPC1-201ENST00000338910 AEBP1Q8IUX7 1158 aa23.62■■□□□ 1.37
PSPC1-201ENST00000338910 PHF8Q9UPP1 1060 aa23.62■■□□□ 1.37
PSPC1-201ENST00000338910 PCDHB15Q9Y5E8 787 aa23.62■■□□□ 1.37
PSPC1-201ENST00000338910 ADGRL3Q9HAR2 1447 aa23.62■■□□□ 1.37
PSPC1-201ENST00000338910 FTSJ3Q8IY81 847 aaKnown RBP23.62■■□□□ 1.37
PSPC1-201ENST00000338910 PIK3C2AO00443 1686 aa23.61■■□□□ 1.37
PSPC1-201ENST00000338910 SULT6B1Q6IMI4 303 aa23.61■■□□□ 1.37
PSPC1-201ENST00000338910 DZIP1LQ8IYY4 767 aaKnown RBP23.61■■□□□ 1.37
PSPC1-201ENST00000338910 PDZRN3Q9UPQ7 1066 aa23.61■■□□□ 1.37
PSPC1-201ENST00000338910 MAP3K19Q56UN5 1328 aa23.61■■□□□ 1.37
PSPC1-201ENST00000338910 PANK2Q9BZ23 570 aa23.6■■□□□ 1.37
PSPC1-201ENST00000338910 PEAK1Q9H792 1746 aa23.6■■□□□ 1.37
PSPC1-201ENST00000338910 ESCO1Q5FWF5 840 aa23.6■■□□□ 1.37
PSPC1-201ENST00000338910 NOB1Q9ULX3 412 aaKnown RBP23.6■■□□□ 1.37
PSPC1-201ENST00000338910 FAM83GA6ND36 823 aa23.59■■□□□ 1.37
PSPC1-201ENST00000338910 ABTB2Q8N961 1025 aa23.59■■□□□ 1.37
PSPC1-201ENST00000338910 TRIM27P14373 513 aa23.59■■□□□ 1.37
PSPC1-201ENST00000338910 MVPQ14764 893 aaKnown RBP23.59■■□□□ 1.37
PSPC1-201ENST00000338910 ARXQ96QS3 562 aa23.59■■□□□ 1.37
PSPC1-201ENST00000338910 CALD1Q05682 793 aaKnown RBP23.58■■□□□ 1.36
PSPC1-201ENST00000338910 DCTN1Q14203 1278 aa23.57■■□□□ 1.36
PSPC1-201ENST00000338910 ATF7IPQ6VMQ6 1270 aa23.56■■□□□ 1.36
PSPC1-201ENST00000338910 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
PSPC1-201ENST00000338910 ELL2O00472 640 aaPredicted RBP23.55■■□□□ 1.36
PSPC1-201ENST00000338910 GNAI1P63096 354 aa23.55■■□□□ 1.36
PSPC1-201ENST00000338910 GZF1Q9H116 711 aaPredicted RBP23.55■■□□□ 1.36
PSPC1-201ENST00000338910 MBIPQ9NS73 344 aa23.55■■□□□ 1.36
PSPC1-201ENST00000338910 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
PSPC1-201ENST00000338910 NAP1L5Q96NT1 182 aaPredicted RBP23.54■■□□□ 1.36
PSPC1-201ENST00000338910 IFT57Q9NWB7 429 aa23.54■■□□□ 1.36
PSPC1-201ENST00000338910 CHMP5Q9NZZ3 219 aa23.54■■□□□ 1.36
PSPC1-201ENST00000338910 AMPHP49418 695 aa23.54■■□□□ 1.36
PSPC1-201ENST00000338910 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
PSPC1-201ENST00000338910 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
PSPC1-201ENST00000338910 FLT4P35916 1363 aa23.53■■□□□ 1.36
PSPC1-201ENST00000338910 TRAK2O60296 914 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms