RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 SLKQ9H2G2 1235 aaPredicted RBP29.55■■■□□ 2.32
NDEL1-201ENST00000334527 IFT57Q9NWB7 429 aa29.55■■■□□ 2.32
NDEL1-201ENST00000334527 RRS1Q15050 365 aaKnown RBP29.53■■■□□ 2.32
NDEL1-201ENST00000334527 TECPR2O15040 1411 aa29.53■■■□□ 2.32
NDEL1-201ENST00000334527 TSPYL6Q8N831 410 aa29.53■■■□□ 2.32
NDEL1-201ENST00000334527 TBC1D2Q9BYX2 928 aa29.53■■■□□ 2.32
NDEL1-201ENST00000334527 HDGFP51858 240 aaKnown RBP29.52■■■□□ 2.32
NDEL1-201ENST00000334527 MRPL50Q8N5N7 158 aaKnown RBP29.52■■■□□ 2.32
NDEL1-201ENST00000334527 SIRT1Q96EB6 747 aa29.52■■■□□ 2.32
NDEL1-201ENST00000334527 MBIPQ9NS73 344 aa29.52■■■□□ 2.32
NDEL1-201ENST00000334527 ITSN1Q15811 1721 aa29.51■■■□□ 2.31
NDEL1-201ENST00000334527 AKAP12Q02952 1782 aa29.51■■■□□ 2.31
NDEL1-201ENST00000334527 ZNF853P0CG23 659 aa29.5■■■□□ 2.31
NDEL1-201ENST00000334527 MFAP1P55081 439 aaKnown RBP29.5■■■□□ 2.31
NDEL1-201ENST00000334527 NUCB1Q02818 461 aa29.5■■■□□ 2.31
NDEL1-201ENST00000334527 C3P01024 1663 aa29.5■■■□□ 2.31
NDEL1-201ENST00000334527 DLG5Q8TDM6 1919 aa29.49■■■□□ 2.31
NDEL1-201ENST00000334527 C22orf23Q9BZE7 217 aa29.49■■■□□ 2.31
NDEL1-201ENST00000334527 LMOD3Q0VAK6 560 aa29.49■■■□□ 2.31
NDEL1-201ENST00000334527 ARHGAP45Q92619 1136 aa29.49■■■□□ 2.31
NDEL1-201ENST00000334527 PTCH1Q13635 1447 aa29.49■■■□□ 2.31
NDEL1-201ENST00000334527 ELL2O00472 640 aaPredicted RBP29.48■■■□□ 2.31
NDEL1-201ENST00000334527 ANTXR1Q9H6X2 564 aa29.48■■■□□ 2.31
NDEL1-201ENST00000334527 ZBTB7BO15156 539 aaPredicted RBP29.47■■■□□ 2.31
NDEL1-201ENST00000334527 PRR36Q9H6K5 1346 aa29.47■■■□□ 2.31
NDEL1-201ENST00000334527 TNRQ92752 1358 aa29.46■■■□□ 2.31
NDEL1-201ENST00000334527 ZNF692Q9BU19 519 aaPredicted RBP29.46■■■□□ 2.31
NDEL1-201ENST00000334527 LNPKQ9C0E8 428 aa29.46■■■□□ 2.31
NDEL1-201ENST00000334527 PIK3R4Q99570 1358 aa29.46■■■□□ 2.31
NDEL1-201ENST00000334527 TWISTNBQ3B726 338 aaPredicted RBP29.45■■■□□ 2.31
NDEL1-201ENST00000334527 CFAP44Q96MT7 982 aa29.45■■■□□ 2.31
NDEL1-201ENST00000334527 CHMP4BQ9H444 224 aaKnown RBP29.45■■■□□ 2.31
NDEL1-201ENST00000334527 CHD1LQ86WJ1 897 aa29.45■■■□□ 2.3
NDEL1-201ENST00000334527 IL27Q8NEV9 243 aa29.44■■■□□ 2.3
NDEL1-201ENST00000334527 FAM83GA6ND36 823 aa29.43■■■□□ 2.3
NDEL1-201ENST00000334527 TMEM2Q9UHN6 1383 aa29.42■■■□□ 2.3
NDEL1-201ENST00000334527 ROBO2Q9HCK4 1378 aa29.42■■■□□ 2.3
NDEL1-201ENST00000334527 C1orf115Q9H7X2 142 aa29.42■■■□□ 2.3
NDEL1-201ENST00000334527 ABCC4O15439 1325 aa29.41■■■□□ 2.3
NDEL1-201ENST00000334527 C8orf58Q8NAV2 365 aa29.41■■■□□ 2.3
NDEL1-201ENST00000334527 UBR1Q8IWV7 1749 aa29.41■■■□□ 2.3
NDEL1-201ENST00000334527 KIF13AQ9H1H9 1805 aa29.39■■■□□ 2.3
NDEL1-201ENST00000334527 DCTN1Q14203 1278 aa29.39■■■□□ 2.3
NDEL1-201ENST00000334527 NRKQ7Z2Y5 1582 aa29.39■■■□□ 2.29
NDEL1-201ENST00000334527 GCC1Q96CN9 775 aa29.39■■■□□ 2.29
NDEL1-201ENST00000334527 ANKRD45Q5TZF3 282 aa29.37■■■□□ 2.29
NDEL1-201ENST00000334527 SPRYD3Q8NCJ5 442 aa29.36■■■□□ 2.29
NDEL1-201ENST00000334527 ADAMTS13Q76LX8 1427 aa29.36■■■□□ 2.29
NDEL1-201ENST00000334527 TTC21BQ7Z4L5 1316 aa29.36■■■□□ 2.29
NDEL1-201ENST00000334527 EIF4A2Q14240 407 aaKnown RBP29.35■■■□□ 2.29
NDEL1-201ENST00000334527 AEBP1Q8IUX7 1158 aa29.35■■■□□ 2.29
NDEL1-201ENST00000334527 API5Q9BZZ5 524 aaKnown RBP29.35■■■□□ 2.29
NDEL1-201ENST00000334527 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.35■■■□□ 2.29
NDEL1-201ENST00000334527 SULT6B1Q6IMI4 303 aa29.34■■■□□ 2.29
NDEL1-201ENST00000334527 ACEP12821 1306 aa29.34■■■□□ 2.29
NDEL1-201ENST00000334527 BMP2KLQ5H9B9 411 aa29.33■■■□□ 2.29
NDEL1-201ENST00000334527 SIRT2Q8IXJ6 389 aa29.33■■■□□ 2.29
NDEL1-201ENST00000334527 BRPF3Q9ULD4 1205 aa29.32■■■□□ 2.28
NDEL1-201ENST00000334527 TOPAZ1Q8N9V7 1692 aa29.32■■■□□ 2.28
NDEL1-201ENST00000334527 NUTM2FA1L443 756 aa29.32■■■□□ 2.28
NDEL1-201ENST00000334527 OVOS2A0A0J9YW53 1432 aa29.3■■■□□ 2.28
NDEL1-201ENST00000334527 OVOS2Q6IE36 1432 aa29.3■■■□□ 2.28
NDEL1-201ENST00000334527 RBM25P49756 843 aaKnown RBP29.29■■■□□ 2.28
NDEL1-201ENST00000334527 PLEKHG3A1L390 1219 aa29.28■■■□□ 2.28
NDEL1-201ENST00000334527 PLEKHG1Q9ULL1 1385 aa29.28■■■□□ 2.28
NDEL1-201ENST00000334527 LTKP29376 864 aa29.27■■■□□ 2.28
NDEL1-201ENST00000334527 HSCBQ8IWL3 235 aa29.27■■■□□ 2.28
NDEL1-201ENST00000334527 USP6P35125 1406 aa29.27■■■□□ 2.28
NDEL1-201ENST00000334527 PEAK1Q9H792 1746 aa29.25■■■□□ 2.27
NDEL1-201ENST00000334527 KIF24Q5T7B8 1368 aa29.25■■■□□ 2.27
NDEL1-201ENST00000334527 HSP90AB2PQ58FF8 381 aa29.24■■■□□ 2.27
NDEL1-201ENST00000334527 MCM10Q7L590 875 aa29.24■■■□□ 2.27
NDEL1-201ENST00000334527 RTN4Q9NQC3 1192 aaKnown RBP29.24■■■□□ 2.27
NDEL1-201ENST00000334527 NALCNQ8IZF0 1738 aa29.24■■■□□ 2.27
NDEL1-201ENST00000334527 CHMP5Q9NZZ3 219 aa29.24■■■□□ 2.27
NDEL1-201ENST00000334527 KRT24Q2M2I5 525 aa29.23■■■□□ 2.27
NDEL1-201ENST00000334527 CHL1O00533 1208 aa29.22■■■□□ 2.27
NDEL1-201ENST00000334527 HAP1P54257 671 aaPredicted RBP29.21■■■□□ 2.27
NDEL1-201ENST00000334527 SOX12O15370 315 aa29.21■■■□□ 2.27
NDEL1-201ENST00000334527 SLC26A8Q96RN1 970 aa29.21■■■□□ 2.27
NDEL1-201ENST00000334527 RGPD1P0DJD0 1748 aa29.21■■■□□ 2.27
NDEL1-201ENST00000334527 USP31Q70CQ4 1352 aa29.2■■■□□ 2.27
NDEL1-201ENST00000334527 PTPRUQ92729 1446 aa29.2■■■□□ 2.26
NDEL1-201ENST00000334527 INTS3Q68E01 1043 aaKnown RBP29.2■■■□□ 2.26
NDEL1-201ENST00000334527 TBC1D9Q6ZT07 1266 aa29.18■■■□□ 2.26
NDEL1-201ENST00000334527 SNX21Q969T3 373 aa29.18■■■□□ 2.26
NDEL1-201ENST00000334527 KIAA0232Q92628 1395 aa29.18■■■□□ 2.26
NDEL1-201ENST00000334527 MCM4P33991 863 aa29.17■■■□□ 2.26
NDEL1-201ENST00000334527 RGS12O14924 1447 aa29.17■■■□□ 2.26
NDEL1-201ENST00000334527 SSH2Q76I76 1423 aa29.16■■■□□ 2.26
NDEL1-201ENST00000334527 EID1Q9Y6B2 187 aa29.15■■■□□ 2.26
NDEL1-201ENST00000334527 NCOA3Q9Y6Q9 1424 aa29.15■■■□□ 2.26
NDEL1-201ENST00000334527 CEBPAP49715 358 aaPredicted RBP29.15■■■□□ 2.26
NDEL1-201ENST00000334527 DCTPP1Q9H773 170 aa29.15■■■□□ 2.26
NDEL1-201ENST00000334527 AMOTL2Q9Y2J4 779 aa29.13■■■□□ 2.25
NDEL1-201ENST00000334527 CRB1P82279 1406 aa29.13■■■□□ 2.25
NDEL1-201ENST00000334527 ARHGEF10O15013 1369 aa29.13■■■□□ 2.25
NDEL1-201ENST00000334527 MAP3K19Q56UN5 1328 aa29.13■■■□□ 2.25
NDEL1-201ENST00000334527 KIF2CQ99661 725 aa29.12■■■□□ 2.25
NDEL1-201ENST00000334527 TTC21AQ8NDW8 1320 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms