RNA–Protein interactions for RNA: ENST00000332503.5

HOXB4-201, Transcript of homeobox B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB4, Length 3,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB4-201ENST00000332503 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
HOXB4-201ENST00000332503 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
HOXB4-201ENST00000332503 TSR2Q969E8 191 aaKnown RBP18.84■□□□□ 0.61
HOXB4-201ENST00000332503 ZDHHC9Q9Y397 364 aa18.84■□□□□ 0.61
HOXB4-201ENST00000332503 PEAK1Q9H792 1746 aa18.84■□□□□ 0.61
HOXB4-201ENST00000332503 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
HOXB4-201ENST00000332503 HSP90AA2PQ14568 343 aaPredicted RBP18.84■□□□□ 0.61
HOXB4-201ENST00000332503 LMBRD1Q9NUN5 540 aa18.84■□□□□ 0.61
HOXB4-201ENST00000332503 NOB1Q9ULX3 412 aaKnown RBP18.84■□□□□ 0.61
HOXB4-201ENST00000332503 MARF1Q9Y4F3 1742 aaKnown RBP18.84■□□□□ 0.61
HOXB4-201ENST00000332503 ALKQ9UM73 1620 aa18.83■□□□□ 0.61
HOXB4-201ENST00000332503 GSPT1P15170 499 aaKnown RBP18.83■□□□□ 0.61
HOXB4-201ENST00000332503 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.61
HOXB4-201ENST00000332503 YTHDC2Q9H6S0 1430 aaKnown RBP18.83■□□□□ 0.61
HOXB4-201ENST00000332503 ARHGAP45Q92619 1136 aa18.83■□□□□ 0.6
HOXB4-201ENST00000332503 GZF1Q9H116 711 aaPredicted RBP18.83■□□□□ 0.6
HOXB4-201ENST00000332503 CACNA1FO60840 1977 aa18.82■□□□□ 0.6
HOXB4-201ENST00000332503 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
HOXB4-201ENST00000332503 HSP90AA1P07900 732 aaKnown RBP18.82■□□□□ 0.6
HOXB4-201ENST00000332503 TBC1D9Q6ZT07 1266 aa18.82■□□□□ 0.6
HOXB4-201ENST00000332503 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
HOXB4-201ENST00000332503 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
HOXB4-201ENST00000332503 K7ELQ4 463 aaPredicted RBP18.81■□□□□ 0.6
HOXB4-201ENST00000332503 HSP90AB1P08238 724 aaKnown RBP18.81■□□□□ 0.6
HOXB4-201ENST00000332503 MORC1Q86VD1 984 aa18.81■□□□□ 0.6
HOXB4-201ENST00000332503 ZSCAN30Q86W11 494 aa18.81■□□□□ 0.6
HOXB4-201ENST00000332503 USP54Q70EL1 1684 aa18.8■□□□□ 0.6
HOXB4-201ENST00000332503 PTMSP20962 102 aa18.8■□□□□ 0.6
HOXB4-201ENST00000332503 ATP7BP35670 1465 aa18.8■□□□□ 0.6
HOXB4-201ENST00000332503 BAG4O95429 457 aaKnown RBP18.8■□□□□ 0.6
HOXB4-201ENST00000332503 ZNF428Q96B54 188 aa18.79■□□□□ 0.6
HOXB4-201ENST00000332503 SSFA2P28290 1259 aa18.78■□□□□ 0.6
HOXB4-201ENST00000332503 MRPL50Q8N5N7 158 aaKnown RBP18.78■□□□□ 0.6
HOXB4-201ENST00000332503 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
HOXB4-201ENST00000332503 HSCBQ8IWL3 235 aa18.78■□□□□ 0.6
HOXB4-201ENST00000332503 SPRYD3Q8NCJ5 442 aa18.78■□□□□ 0.6
HOXB4-201ENST00000332503 GPT2Q8TD30 523 aa18.77■□□□□ 0.59
HOXB4-201ENST00000332503 GCC1Q96CN9 775 aa18.76■□□□□ 0.59
HOXB4-201ENST00000332503 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
HOXB4-201ENST00000332503 SPATA31D1Q6ZQQ2 1576 aa18.75■□□□□ 0.59
HOXB4-201ENST00000332503 VAMP4O75379 141 aa18.74■□□□□ 0.59
HOXB4-201ENST00000332503 SALL3Q9BXA9 1300 aa18.74■□□□□ 0.59
HOXB4-201ENST00000332503 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
HOXB4-201ENST00000332503 RBSNQ9H1K0 784 aa18.73■□□□□ 0.59
HOXB4-201ENST00000332503 FYB1O15117 783 aa18.73■□□□□ 0.59
HOXB4-201ENST00000332503 KIAA1211Q6ZU35 1233 aa18.73■□□□□ 0.59
HOXB4-201ENST00000332503 PKP1Q13835 747 aa18.72■□□□□ 0.59
HOXB4-201ENST00000332503 ZSCAN23Q3MJ62 389 aa18.72■□□□□ 0.59
HOXB4-201ENST00000332503 USP26Q9BXU7 913 aa18.72■□□□□ 0.59
HOXB4-201ENST00000332503 KIAA0232Q92628 1395 aa18.72■□□□□ 0.59
HOXB4-201ENST00000332503 PLEKHM2Q8IWE5 1019 aa18.72■□□□□ 0.59
HOXB4-201ENST00000332503 CANXP27824 592 aaKnown RBP18.71■□□□□ 0.59
HOXB4-201ENST00000332503 SMC4Q9NTJ3 1288 aa18.71■□□□□ 0.59
HOXB4-201ENST00000332503 GBP4Q96PP9 640 aa18.71■□□□□ 0.59
HOXB4-201ENST00000332503 RIMS1Q86UR5 1692 aaKnown RBP18.71■□□□□ 0.59
HOXB4-201ENST00000332503 VSIG10Q8N0Z9 540 aa18.7■□□□□ 0.58
HOXB4-201ENST00000332503 NASPP49321 788 aaPredicted RBP18.69■□□□□ 0.58
HOXB4-201ENST00000332503 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
HOXB4-201ENST00000332503 GTF2F1P35269 517 aaKnown RBP eCLIP18.68■□□□□ 0.581e-9■■■□□ 17.3
HOXB4-201ENST00000332503 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
HOXB4-201ENST00000332503 LNPKQ9C0E8 428 aa18.67■□□□□ 0.58
HOXB4-201ENST00000332503 DCTPP1Q9H773 170 aa18.67■□□□□ 0.58
HOXB4-201ENST00000332503 NSFL1CQ9UNZ2 370 aaKnown RBP18.67■□□□□ 0.58
HOXB4-201ENST00000332503 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
HOXB4-201ENST00000332503 AATKQ6ZMQ8 1374 aa18.67■□□□□ 0.58
HOXB4-201ENST00000332503 CPS1P31327 1500 aa18.67■□□□□ 0.58
HOXB4-201ENST00000332503 MCM5P33992 734 aa18.66■□□□□ 0.58
HOXB4-201ENST00000332503 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
HOXB4-201ENST00000332503 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
HOXB4-201ENST00000332503 KIF3BO15066 747 aa18.65■□□□□ 0.58
HOXB4-201ENST00000332503 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
HOXB4-201ENST00000332503 TRAK1Q9UPV9 953 aa18.65■□□□□ 0.58
HOXB4-201ENST00000332503 ZKSCAN5Q9Y2L8 839 aa18.65■□□□□ 0.58
HOXB4-201ENST00000332503 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.58
HOXB4-201ENST00000332503 TTC22Q5TAA0 569 aa18.64■□□□□ 0.58
HOXB4-201ENST00000332503 TMEM63CQ9P1W3 806 aa18.64■□□□□ 0.58
HOXB4-201ENST00000332503 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
HOXB4-201ENST00000332503 PRIM1P49642 420 aaKnown RBP18.64■□□□□ 0.57
HOXB4-201ENST00000332503 FCHSD2O94868 740 aa18.63■□□□□ 0.57
HOXB4-201ENST00000332503 TSPYL6Q8N831 410 aa18.63■□□□□ 0.57
HOXB4-201ENST00000332503 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
HOXB4-201ENST00000332503 RIMS2Q9UQ26 1411 aa18.63■□□□□ 0.57
HOXB4-201ENST00000332503 TMEM132EQ6IEE7 984 aa18.63■□□□□ 0.57
HOXB4-201ENST00000332503 OSBPL3Q9H4L5 887 aa18.63■□□□□ 0.57
HOXB4-201ENST00000332503 INTS3Q68E01 1043 aaKnown RBP18.62■□□□□ 0.57
HOXB4-201ENST00000332503 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.62■□□□□ 0.57
HOXB4-201ENST00000332503 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
HOXB4-201ENST00000332503 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
HOXB4-201ENST00000332503 CUL4AQ13619 759 aa18.62■□□□□ 0.57
HOXB4-201ENST00000332503 RABEP1Q15276 862 aa18.62■□□□□ 0.57
HOXB4-201ENST00000332503 RPAP1Q9BWH6 1393 aaPredicted RBP18.61■□□□□ 0.57
HOXB4-201ENST00000332503 ZNF710Q8N1W2 664 aa18.61■□□□□ 0.57
HOXB4-201ENST00000332503 LRSAM1Q6UWE0 723 aa18.61■□□□□ 0.57
HOXB4-201ENST00000332503 CDC45O75419 566 aa18.6■□□□□ 0.57
HOXB4-201ENST00000332503 IFT57Q9NWB7 429 aa18.6■□□□□ 0.57
HOXB4-201ENST00000332503 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
HOXB4-201ENST00000332503 PLEKHG5O94827 1062 aa18.59■□□□□ 0.57
HOXB4-201ENST00000332503 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.57
HOXB4-201ENST00000332503 KLHL34Q8N239 644 aa18.58■□□□□ 0.57
HOXB4-201ENST00000332503 MED1Q15648 1581 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms