RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 NOB1Q9ULX3 412 aaKnown RBP22.43■■□□□ 1.18
SOCS3-201ENST00000330871 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
SOCS3-201ENST00000330871 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
SOCS3-201ENST00000330871 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.18
SOCS3-201ENST00000330871 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
SOCS3-201ENST00000330871 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
SOCS3-201ENST00000330871 NUCB2P80303 420 aa22.42■■□□□ 1.18
SOCS3-201ENST00000330871 ATF7IPQ6VMQ6 1270 aa22.42■■□□□ 1.18
SOCS3-201ENST00000330871 MROH1Q8NDA8 1641 aa22.42■■□□□ 1.18
SOCS3-201ENST00000330871 FOXD4L5Q5VV16 416 aaPredicted RBP22.41■■□□□ 1.18
SOCS3-201ENST00000330871 C17orf53Q8N3J3 647 aaPredicted RBP22.41■■□□□ 1.18
SOCS3-201ENST00000330871 FOXD4L4Q8WXT5 416 aaPredicted RBP22.41■■□□□ 1.18
SOCS3-201ENST00000330871 ZBTB40Q9NUA8 1239 aa22.41■■□□□ 1.18
SOCS3-201ENST00000330871 EFCAB6Q5THR3 1501 aa22.41■■□□□ 1.18
SOCS3-201ENST00000330871 KIF20AO95235 890 aa22.41■■□□□ 1.18
SOCS3-201ENST00000330871 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
SOCS3-201ENST00000330871 BCL11BQ9C0K0 894 aaPredicted RBP22.4■■□□□ 1.18
SOCS3-201ENST00000330871 FANCAO15360 1455 aa22.4■■□□□ 1.18
SOCS3-201ENST00000330871 CYP2E1P05181 493 aaPredicted RBP22.4■■□□□ 1.18
SOCS3-201ENST00000330871 USP32Q8NFA0 1604 aa22.4■■□□□ 1.18
SOCS3-201ENST00000330871 MROH2AA6NES4 1674 aa22.39■■□□□ 1.18
SOCS3-201ENST00000330871 ARHGAP31Q2M1Z3 1444 aa22.39■■□□□ 1.17
SOCS3-201ENST00000330871 ZGPATQ8N5A5 531 aaKnown RBP22.39■■□□□ 1.17
SOCS3-201ENST00000330871 ADGRL1O94910 1474 aa22.38■■□□□ 1.17
SOCS3-201ENST00000330871 LETM1O95202 739 aaPredicted RBP22.37■■□□□ 1.17
SOCS3-201ENST00000330871 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
SOCS3-201ENST00000330871 NSD2O96028 1365 aa22.37■■□□□ 1.17
SOCS3-201ENST00000330871 CHMP4BQ9H444 224 aaKnown RBP22.36■■□□□ 1.17
SOCS3-201ENST00000330871 ADGRB3O60242 1522 aa22.36■■□□□ 1.17
SOCS3-201ENST00000330871 QRICH2Q9H0J4 1663 aa22.36■■□□□ 1.17
SOCS3-201ENST00000330871 TMEM132EQ6IEE7 984 aa22.36■■□□□ 1.17
SOCS3-201ENST00000330871 C1orf115Q9H7X2 142 aa22.35■■□□□ 1.17
SOCS3-201ENST00000330871 ZDHHC9Q9Y397 364 aa22.35■■□□□ 1.17
SOCS3-201ENST00000330871 ZC3H13Q5T200 1668 aaKnown RBP22.35■■□□□ 1.17
SOCS3-201ENST00000330871 ABCA9Q8IUA7 1624 aa22.34■■□□□ 1.17
SOCS3-201ENST00000330871 PRIMPOLQ96LW4 560 aa22.34■■□□□ 1.17
SOCS3-201ENST00000330871 TMEM51Q9NW97 253 aa22.34■■□□□ 1.17
SOCS3-201ENST00000330871 NAP1L2Q9ULW6 460 aaPredicted RBP22.34■■□□□ 1.17
SOCS3-201ENST00000330871 NOLC1Q14978 699 aaKnown RBP eCLIP22.33■■□□□ 1.17
SOCS3-201ENST00000330871 BCL2L12Q9HB09 334 aa22.33■■□□□ 1.17
SOCS3-201ENST00000330871 KIF3AQ9Y496 699 aa22.33■■□□□ 1.17
SOCS3-201ENST00000330871 ADGRB1O14514 1584 aa22.33■■□□□ 1.17
SOCS3-201ENST00000330871 ADGRB2O60241 1585 aa22.33■■□□□ 1.17
SOCS3-201ENST00000330871 PPRC1Q5VV67 1664 aaKnown RBP22.33■■□□□ 1.17
SOCS3-201ENST00000330871 ANKRD36BQ8N2N9 1353 aa22.33■■□□□ 1.17
SOCS3-201ENST00000330871 LMTK2Q8IWU2 1503 aa22.33■■□□□ 1.17
SOCS3-201ENST00000330871 EVC2Q86UK5 1308 aa22.33■■□□□ 1.16
SOCS3-201ENST00000330871 VGLL3A8MV65 326 aa22.32■■□□□ 1.16
SOCS3-201ENST00000330871 ZBTB22O15209 634 aa22.32■■□□□ 1.16
SOCS3-201ENST00000330871 TTC12Q9H892 705 aaPredicted RBP22.32■■□□□ 1.16
SOCS3-201ENST00000330871 RABEP1Q15276 862 aa22.31■■□□□ 1.16
SOCS3-201ENST00000330871 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
SOCS3-201ENST00000330871 U2AF2P26368 475 aaKnown RBP eCLIP22.31■■□□□ 1.16
SOCS3-201ENST00000330871 HMGN5P82970 282 aaKnown RBP22.31■■□□□ 1.16
SOCS3-201ENST00000330871 TMPOP42166 694 aaKnown RBP22.3■■□□□ 1.16
SOCS3-201ENST00000330871 GTF2F1P35269 517 aaKnown RBP eCLIP22.3■■□□□ 1.16
SOCS3-201ENST00000330871 PDCL2Q8N4E4 241 aa22.3■■□□□ 1.16
SOCS3-201ENST00000330871 PIBF1Q8WXW3 757 aa22.3■■□□□ 1.16
SOCS3-201ENST00000330871 CFAP74Q9C0B2 1584 aa22.3■■□□□ 1.16
SOCS3-201ENST00000330871 PLEKHF1Q96S99 279 aa22.3■■□□□ 1.16
SOCS3-201ENST00000330871 CGNQ9P2M7 1197 aaKnown RBP22.3■■□□□ 1.16
SOCS3-201ENST00000330871 CDC45O75419 566 aa22.29■■□□□ 1.16
SOCS3-201ENST00000330871 TSPY26PQ9H489 355 aa22.29■■□□□ 1.16
SOCS3-201ENST00000330871 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
SOCS3-201ENST00000330871 IL16Q14005 1332 aa22.28■■□□□ 1.16
SOCS3-201ENST00000330871 U2SURPO15042 1029 aaKnown RBP22.28■■□□□ 1.16
SOCS3-201ENST00000330871 PPLO60437 1756 aa22.27■■□□□ 1.15
SOCS3-201ENST00000330871 CD109Q6YHK3 1445 aa22.26■■□□□ 1.15
SOCS3-201ENST00000330871 IPO8O15397 1037 aaKnown RBP22.26■■□□□ 1.15
SOCS3-201ENST00000330871 GSPT1P15170 499 aaKnown RBP22.25■■□□□ 1.15
SOCS3-201ENST00000330871 USP25Q9UHP3 1055 aa22.25■■□□□ 1.15
SOCS3-201ENST00000330871 ABCC11Q96J66 1382 aa22.25■■□□□ 1.15
SOCS3-201ENST00000330871 FOXD4L6Q3SYB3 417 aaPredicted RBP22.25■■□□□ 1.15
SOCS3-201ENST00000330871 FOXD4L3Q6VB84 417 aaPredicted RBP22.25■■□□□ 1.15
SOCS3-201ENST00000330871 CWC22Q9HCG8 908 aaKnown RBP22.25■■□□□ 1.15
SOCS3-201ENST00000330871 PPIP5K1Q6PFW1 1433 aa22.25■■□□□ 1.15
SOCS3-201ENST00000330871 ZNF771Q7L3S4 317 aaPredicted RBP22.24■■□□□ 1.15
SOCS3-201ENST00000330871 NPATQ14207 1427 aa22.24■■□□□ 1.15
SOCS3-201ENST00000330871 CABP2Q9NPB3 220 aa22.23■■□□□ 1.15
SOCS3-201ENST00000330871 KIDINS220Q9ULH0 1771 aa22.22■■□□□ 1.15
SOCS3-201ENST00000330871 TPRNQ4KMQ1 711 aa22.22■■□□□ 1.15
SOCS3-201ENST00000330871 TULP4Q9NRJ4 1543 aa22.22■■□□□ 1.15
SOCS3-201ENST00000330871 GCC1Q96CN9 775 aa22.22■■□□□ 1.15
SOCS3-201ENST00000330871 USP26Q9BXU7 913 aa22.22■■□□□ 1.15
SOCS3-201ENST00000330871 MBD3O95983 291 aa22.21■■□□□ 1.15
SOCS3-201ENST00000330871 FKBP5Q13451 457 aaPredicted RBP22.21■■□□□ 1.15
SOCS3-201ENST00000330871 RIOK3O14730 519 aaKnown RBP22.2■■□□□ 1.14
SOCS3-201ENST00000330871 VGFO15240 615 aaPredicted RBP22.2■■□□□ 1.14
SOCS3-201ENST00000330871 ALDH1L2Q3SY69 923 aa22.19■■□□□ 1.14
SOCS3-201ENST00000330871 GDPD2Q9HCC8 539 aa22.19■■□□□ 1.14
SOCS3-201ENST00000330871 GLI2P10070 1586 aa22.19■■□□□ 1.14
SOCS3-201ENST00000330871 ADCY5O95622 1261 aa22.19■■□□□ 1.14
SOCS3-201ENST00000330871 SIRT2Q8IXJ6 389 aa22.19■■□□□ 1.14
SOCS3-201ENST00000330871 GGNBP2Q9H3C7 697 aa22.19■■□□□ 1.14
SOCS3-201ENST00000330871 ST18O60284 1047 aa22.18■■□□□ 1.14
SOCS3-201ENST00000330871 GGT6Q6P531 493 aa22.18■■□□□ 1.14
SOCS3-201ENST00000330871 MAPK8IP2Q13387 824 aaPredicted RBP22.18■■□□□ 1.14
SOCS3-201ENST00000330871 PLCD3Q8N3E9 789 aa22.18■■□□□ 1.14
SOCS3-201ENST00000330871 A0A1W2PP64 1363 aa22.17■■□□□ 1.14
SOCS3-201ENST00000330871 CFAP65Q6ZU64 1925 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms