RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 NOL8Q76FK4 1167 aaKnown RBP9.74□□□□□ -0.85
VMA21-201ENST00000330374 C16orf71Q8IYS4 520 aaPredicted RBP9.74□□□□□ -0.85
VMA21-201ENST00000330374 TSPYL6Q8N831 410 aa9.74□□□□□ -0.85
VMA21-201ENST00000330374 PLCH2O75038 1416 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 CD109Q6YHK3 1445 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 MINK1Q8N4C8 1332 aaPredicted RBP9.73□□□□□ -0.85
VMA21-201ENST00000330374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
VMA21-201ENST00000330374 EVC2Q86UK5 1308 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 ABCA6Q8N139 1617 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 KLHL40Q2TBA0 621 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 ZGPATQ8N5A5 531 aaKnown RBP9.73□□□□□ -0.85
VMA21-201ENST00000330374 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 PRKAR2BP31323 418 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 PRIM1P49642 420 aaKnown RBP9.73□□□□□ -0.85
VMA21-201ENST00000330374 ZSCAN23Q3MJ62 389 aa9.73□□□□□ -0.85
VMA21-201ENST00000330374 DIAPH1O60610 1272 aaKnown RBP9.72□□□□□ -0.85
VMA21-201ENST00000330374 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
VMA21-201ENST00000330374 PDCL3Q9H2J4 239 aa9.72□□□□□ -0.85
VMA21-201ENST00000330374 CDC45O75419 566 aa9.72□□□□□ -0.85
VMA21-201ENST00000330374 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.71□□□□□ -0.85
VMA21-201ENST00000330374 OTUD7AQ8TE49 926 aaPredicted RBP9.71□□□□□ -0.85
VMA21-201ENST00000330374 ZBTB7BO15156 539 aaPredicted RBP9.71□□□□□ -0.85
VMA21-201ENST00000330374 OFD1O75665 1012 aa9.71□□□□□ -0.85
VMA21-201ENST00000330374 SIRT2Q8IXJ6 389 aa9.71□□□□□ -0.85
VMA21-201ENST00000330374 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.85
VMA21-201ENST00000330374 PPIP5K1Q6PFW1 1433 aa9.71□□□□□ -0.85
VMA21-201ENST00000330374 SMARCA5O60264 1052 aaPredicted RBP9.71□□□□□ -0.86
VMA21-201ENST00000330374 PTMSP20962 102 aa9.71□□□□□ -0.86
VMA21-201ENST00000330374 SYCE3A1L190 88 aa9.71□□□□□ -0.86
VMA21-201ENST00000330374 GSPT1P15170 499 aaKnown RBP9.71□□□□□ -0.86
VMA21-201ENST00000330374 PPP1R9BQ96SB3 815 aa9.71□□□□□ -0.86
VMA21-201ENST00000330374 C14orf93Q9H972 538 aaKnown RBP9.71□□□□□ -0.86
VMA21-201ENST00000330374 UQCRHLA0A096LP55 91 aa9.7□□□□□ -0.86
VMA21-201ENST00000330374 PTMAP06454 111 aaKnown RBP9.7□□□□□ -0.86
VMA21-201ENST00000330374 UQCRHP07919 91 aa9.7□□□□□ -0.86
VMA21-201ENST00000330374 ERCC6L2Q5T890 1561 aa9.7□□□□□ -0.86
VMA21-201ENST00000330374 GCC1Q96CN9 775 aa9.7□□□□□ -0.86
VMA21-201ENST00000330374 MAP3K4Q9Y6R4 1608 aa9.7□□□□□ -0.86
VMA21-201ENST00000330374 PHACTR3Q96KR7 559 aa9.7□□□□□ -0.86
VMA21-201ENST00000330374 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
VMA21-201ENST00000330374 ABCC11Q96J66 1382 aa9.69□□□□□ -0.86
VMA21-201ENST00000330374 FYB1O15117 783 aa9.69□□□□□ -0.86
VMA21-201ENST00000330374 DNTTIP2Q5QJE6 756 aaKnown RBP9.69□□□□□ -0.86
VMA21-201ENST00000330374 LMBRD1Q9NUN5 540 aa9.69□□□□□ -0.86
VMA21-201ENST00000330374 NSFL1CQ9UNZ2 370 aaKnown RBP9.69□□□□□ -0.86
VMA21-201ENST00000330374 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
VMA21-201ENST00000330374 TMCO4Q5TGY1 634 aa9.68□□□□□ -0.86
VMA21-201ENST00000330374 A0A1W2PP64 1363 aa9.68□□□□□ -0.86
VMA21-201ENST00000330374 RABEP1Q15276 862 aa9.68□□□□□ -0.86
VMA21-201ENST00000330374 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
VMA21-201ENST00000330374 ANKRD36BQ8N2N9 1353 aa9.68□□□□□ -0.86
VMA21-201ENST00000330374 NUCB2P80303 420 aa9.68□□□□□ -0.86
VMA21-201ENST00000330374 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
VMA21-201ENST00000330374 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
VMA21-201ENST00000330374 JARID2Q92833 1246 aaPredicted RBP9.68□□□□□ -0.86
VMA21-201ENST00000330374 ABCC1P33527 1531 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 VAMP4O75379 141 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 SMYD5Q6GMV2 418 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 TWISTNBQ3B726 338 aaPredicted RBP9.67□□□□□ -0.86
VMA21-201ENST00000330374 SBNO2Q9Y2G9 1366 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 TSHZ3Q63HK5 1081 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 TSC1Q92574 1164 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 TMEM63CQ9P1W3 806 aa9.67□□□□□ -0.86
VMA21-201ENST00000330374 C8orf58Q8NAV2 365 aa9.66□□□□□ -0.86
VMA21-201ENST00000330374 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
VMA21-201ENST00000330374 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
VMA21-201ENST00000330374 KRT24Q2M2I5 525 aa9.66□□□□□ -0.86
VMA21-201ENST00000330374 MBIPQ9NS73 344 aa9.66□□□□□ -0.86
VMA21-201ENST00000330374 ST18O60284 1047 aa9.66□□□□□ -0.86
VMA21-201ENST00000330374 ZNF445P59923 1031 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 ZNF830Q96NB3 372 aaPredicted RBP9.65□□□□□ -0.86
VMA21-201ENST00000330374 USP26Q9BXU7 913 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 TERF2IPQ9NYB0 399 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.65□□□□□ -0.86
VMA21-201ENST00000330374 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 PRAM1Q96QH2 718 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 MYOM2P54296 1465 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 IL16Q14005 1332 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 ZFYVE16Q7Z3T8 1539 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 FAM177BA6PVY3 158 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 SDSP20132 328 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 TTC22Q5TAA0 569 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 NOL7Q9UMY1 257 aaKnown RBP9.65□□□□□ -0.86
VMA21-201ENST00000330374 TET3O43151 1660 aa9.65□□□□□ -0.86
VMA21-201ENST00000330374 NEK4P51957 841 aa9.65□□□□□ -0.87
VMA21-201ENST00000330374 INTS3Q68E01 1043 aaKnown RBP9.65□□□□□ -0.87
VMA21-201ENST00000330374 POLA2Q14181 598 aa9.64□□□□□ -0.87
VMA21-201ENST00000330374 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
VMA21-201ENST00000330374 ZDHHC9Q9Y397 364 aa9.64□□□□□ -0.87
VMA21-201ENST00000330374 EMILIN1Q9Y6C2 1016 aa9.64□□□□□ -0.87
VMA21-201ENST00000330374 KIF1BO60333 1816 aa9.64□□□□□ -0.87
VMA21-201ENST00000330374 CASC1Q6TDU7 716 aa9.64□□□□□ -0.87
VMA21-201ENST00000330374 ZKSCAN5Q9Y2L8 839 aa9.64□□□□□ -0.87
VMA21-201ENST00000330374 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms