RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 EXOC6Q8TAG9 804 aa34.42■■■■□ 3.1
TM6SF1-202ENST00000322019 NCBP3Q53F19 620 aaKnown RBP34.42■■■■□ 3.1
TM6SF1-202ENST00000322019 SULT6B1Q6IMI4 303 aa34.41■■■■□ 3.1
TM6SF1-202ENST00000322019 SBNO1A3KN83 1393 aa34.41■■■■□ 3.1
TM6SF1-202ENST00000322019 NEFMP07197 916 aa34.4■■■■□ 3.1
TM6SF1-202ENST00000322019 ATF3P18847 181 aa34.4■■■■□ 3.1
TM6SF1-202ENST00000322019 C20orf194Q5TEA3 1177 aa34.4■■■■□ 3.1
TM6SF1-202ENST00000322019 FLT4P35916 1363 aa34.4■■■■□ 3.1
TM6SF1-202ENST00000322019 TSR2Q969E8 191 aaKnown RBP34.4■■■■□ 3.1
TM6SF1-202ENST00000322019 BCAR3O75815 825 aa34.39■■■■□ 3.1
TM6SF1-202ENST00000322019 NFE2L2Q16236 605 aa34.37■■■■□ 3.09
TM6SF1-202ENST00000322019 USP54Q70EL1 1684 aa34.36■■■■□ 3.09
TM6SF1-202ENST00000322019 MST1RQ04912 1400 aa34.36■■■■□ 3.09
TM6SF1-202ENST00000322019 DDX17Q92841 729 aaKnown RBP34.36■■■■□ 3.09
TM6SF1-202ENST00000322019 LMOD2Q6P5Q4 547 aa34.35■■■■□ 3.09
TM6SF1-202ENST00000322019 THUMPD2Q9BTF0 503 aaKnown RBP34.35■■■■□ 3.09
TM6SF1-202ENST00000322019 ZNF335Q9H4Z2 1342 aaPredicted RBP34.34■■■■□ 3.09
TM6SF1-202ENST00000322019 MYH16Q9H6N6 1097 aa34.34■■■■□ 3.09
TM6SF1-202ENST00000322019 FANCIQ9NVI1 1328 aa34.33■■■■□ 3.09
TM6SF1-202ENST00000322019 HOXC9P31274 260 aa34.32■■■■□ 3.09
TM6SF1-202ENST00000322019 RGPD1P0DJD0 1748 aa34.32■■■■□ 3.08
TM6SF1-202ENST00000322019 KRT28Q7Z3Y7 464 aa34.31■■■■□ 3.08
TM6SF1-202ENST00000322019 TSHZ2Q9NRE2 1034 aa34.31■■■■□ 3.08
TM6SF1-202ENST00000322019 CRBNQ96SW2 442 aa34.31■■■■□ 3.08
TM6SF1-202ENST00000322019 ZBTB7CA1YPR0 619 aa34.29■■■■□ 3.08
TM6SF1-202ENST00000322019 LTV1Q96GA3 475 aaPredicted RBP34.29■■■■□ 3.08
TM6SF1-202ENST00000322019 CCDC136Q96JN2 1154 aa34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 XIRP1Q702N8 1843 aaKnown RBP34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 DCCP43146 1447 aa34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 NFAT5O94916 1531 aa34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 FAM83GA6ND36 823 aa34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 EYA1Q99502 592 aa34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 NCOA3Q9Y6Q9 1424 aa34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 KIF1AQ12756 1690 aa34.27■■■■□ 3.08
TM6SF1-202ENST00000322019 MSH6P52701 1360 aa34.26■■■■□ 3.08
TM6SF1-202ENST00000322019 CADPS2Q86UW7 1296 aa34.26■■■■□ 3.07
TM6SF1-202ENST00000322019 BCL2L13Q9BXK5 485 aa34.26■■■■□ 3.07
TM6SF1-202ENST00000322019 TRPM3Q9HCF6 1732 aaPredicted RBP34.25■■■■□ 3.07
TM6SF1-202ENST00000322019 LAS1LQ9Y4W2 734 aaKnown RBP34.25■■■■□ 3.07
TM6SF1-202ENST00000322019 LTN1O94822 1766 aa34.25■■■■□ 3.07
TM6SF1-202ENST00000322019 DLG5Q8TDM6 1919 aa34.24■■■■□ 3.07
TM6SF1-202ENST00000322019 EXOSC9Q06265 439 aaKnown RBP34.24■■■■□ 3.07
TM6SF1-202ENST00000322019 DCTN1Q14203 1278 aa34.24■■■■□ 3.07
TM6SF1-202ENST00000322019 ARHGEF10O15013 1369 aa34.24■■■■□ 3.07
TM6SF1-202ENST00000322019 IL16Q14005 1332 aa34.23■■■■□ 3.07
TM6SF1-202ENST00000322019 RARSP54136 660 aaKnown RBP34.23■■■■□ 3.07
TM6SF1-202ENST00000322019 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.21■■■■□ 3.07
TM6SF1-202ENST00000322019 IGSF1Q8N6C5 1336 aa34.21■■■■□ 3.07
TM6SF1-202ENST00000322019 GCP02774 474 aa34.19■■■■□ 3.06
TM6SF1-202ENST00000322019 KIF24Q5T7B8 1368 aa34.19■■■■□ 3.06
TM6SF1-202ENST00000322019 KCNH5Q8NCM2 988 aa34.18■■■■□ 3.06
TM6SF1-202ENST00000322019 FRAT1Q92837 279 aaPredicted RBP34.17■■■■□ 3.06
TM6SF1-202ENST00000322019 KDRP35968 1356 aa34.16■■■■□ 3.06
TM6SF1-202ENST00000322019 USHBP1Q8N6Y0 703 aa34.16■■■■□ 3.06
TM6SF1-202ENST00000322019 IP6K1Q92551 441 aa34.16■■■■□ 3.06
TM6SF1-202ENST00000322019 RTL1A6NKG5 1358 aa34.15■■■■□ 3.06
TM6SF1-202ENST00000322019 SLIT3O75094 1523 aa34.13■■■■□ 3.05
TM6SF1-202ENST00000322019 CANXP27824 592 aaKnown RBP34.13■■■■□ 3.05
TM6SF1-202ENST00000322019 USP19O94966 1318 aa34.12■■■■□ 3.05
TM6SF1-202ENST00000322019 LMOD3Q0VAK6 560 aa34.12■■■■□ 3.05
TM6SF1-202ENST00000322019 MTHFSDQ2M296 383 aaKnown RBP34.12■■■■□ 3.05
TM6SF1-202ENST00000322019 MCM10Q7L590 875 aa34.12■■■■□ 3.05
TM6SF1-202ENST00000322019 TNNQ9UQP3 1299 aa34.1■■■■□ 3.05
TM6SF1-202ENST00000322019 ALS2Q96Q42 1657 aa34.1■■■■□ 3.05
TM6SF1-202ENST00000322019 ARHGEF25Q86VW2 580 aa34.1■■■■□ 3.05
TM6SF1-202ENST00000322019 BRINP3Q76B58 766 aa34.09■■■■□ 3.05
TM6SF1-202ENST00000322019 NPHP3Q7Z494 1330 aa34.09■■■■□ 3.05
TM6SF1-202ENST00000322019 MBIPQ9NS73 344 aa34.08■■■■□ 3.05
TM6SF1-202ENST00000322019 PANK1Q8TE04 598 aa34.08■■■■□ 3.05
TM6SF1-202ENST00000322019 CALD1Q05682 793 aaKnown RBP34.07■■■■□ 3.04
TM6SF1-202ENST00000322019 IFT57Q9NWB7 429 aa34.07■■■■□ 3.04
TM6SF1-202ENST00000322019 MED1Q15648 1581 aaPredicted RBP34.07■■■■□ 3.04
TM6SF1-202ENST00000322019 ZNF853P0CG23 659 aa34.06■■■■□ 3.04
TM6SF1-202ENST00000322019 ZC3H6P61129 1189 aaKnown RBP34.06■■■■□ 3.04
TM6SF1-202ENST00000322019 NBPF6Q5VWK0 638 aa34.06■■■■□ 3.04
TM6SF1-202ENST00000322019 CABLES1Q8TDN4 633 aa34.06■■■■□ 3.04
TM6SF1-202ENST00000322019 LRRC59Q96AG4 307 aaKnown RBP34.06■■■■□ 3.04
TM6SF1-202ENST00000322019 NBPF4Q96M43 638 aa34.06■■■■□ 3.04
TM6SF1-202ENST00000322019 GNAI1P63096 354 aa34.05■■■■□ 3.04
TM6SF1-202ENST00000322019 SSH1Q8WYL5 1049 aa34.04■■■■□ 3.04
TM6SF1-202ENST00000322019 AXIN2Q9Y2T1 843 aa34.04■■■■□ 3.04
TM6SF1-202ENST00000322019 PXDNQ92626 1479 aa34.04■■■■□ 3.04
TM6SF1-202ENST00000322019 SMC4Q9NTJ3 1288 aa34.03■■■■□ 3.04
TM6SF1-202ENST00000322019 TSPYL6Q8N831 410 aa34.03■■■■□ 3.04
TM6SF1-202ENST00000322019 CFAP44Q96MT7 982 aa34.03■■■■□ 3.04
TM6SF1-202ENST00000322019 SLAIN2Q9P270 581 aa34.03■■■■□ 3.04
TM6SF1-202ENST00000322019 CT47B1P0C2W7 299 aaPredicted RBP34.02■■■■□ 3.04
TM6SF1-202ENST00000322019 ELL2O00472 640 aaPredicted RBP34.02■■■■□ 3.04
TM6SF1-202ENST00000322019 PHRF1Q9P1Y6 1649 aaKnown RBP34.01■■■■□ 3.04
TM6SF1-202ENST00000322019 RLBP1P12271 317 aa34■■■■□ 3.03
TM6SF1-202ENST00000322019 CLUAP1Q96AJ1 413 aa34■■■■□ 3.03
TM6SF1-202ENST00000322019 COG6Q9Y2V7 657 aa34■■■■□ 3.03
TM6SF1-202ENST00000322019 RGPD2P0DJD1 1756 aa34■■■■□ 3.03
TM6SF1-202ENST00000322019 TNS3Q68CZ2 1445 aa34■■■■□ 3.03
TM6SF1-202ENST00000322019 PDE3AQ14432 1141 aa33.99■■■■□ 3.03
TM6SF1-202ENST00000322019 SPATA31A3Q5VYP0 1347 aa33.96■■■■□ 3.03
TM6SF1-202ENST00000322019 ANKRD24Q8TF21 1146 aa33.96■■■■□ 3.03
TM6SF1-202ENST00000322019 C8orf58Q8NAV2 365 aa33.95■■■■□ 3.03
TM6SF1-202ENST00000322019 GAS2L2Q8NHY3 880 aa33.95■■■■□ 3.03
TM6SF1-202ENST00000322019 RTF1Q92541 710 aaKnown RBP33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms