RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 RSPH6AQ9H0K4 717 aa16.55■□□□□ 0.24
PTPN6-201ENST00000318974 RCAN3Q9UKA8 241 aa16.55■□□□□ 0.24
PTPN6-201ENST00000318974 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
PTPN6-201ENST00000318974 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
PTPN6-201ENST00000318974 PXDNQ92626 1479 aa16.55■□□□□ 0.24
PTPN6-201ENST00000318974 SLIT3O75094 1523 aa16.55■□□□□ 0.24
PTPN6-201ENST00000318974 GCP02774 474 aa16.54■□□□□ 0.24
PTPN6-201ENST00000318974 RRP1P56182 461 aaKnown RBP16.54■□□□□ 0.24
PTPN6-201ENST00000318974 NFAT5O94916 1531 aa16.54■□□□□ 0.24
PTPN6-201ENST00000318974 RTL1A6NKG5 1358 aa16.54■□□□□ 0.24
PTPN6-201ENST00000318974 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
PTPN6-201ENST00000318974 HMOX1P09601 288 aa16.54■□□□□ 0.24
PTPN6-201ENST00000318974 HOXC9P31274 260 aa16.54■□□□□ 0.24
PTPN6-201ENST00000318974 NEFMP07197 916 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 PRKAR2BP31323 418 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 CCDC136Q96JN2 1154 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
PTPN6-201ENST00000318974 SPATA31A3Q5VYP0 1347 aa16.53■□□□□ 0.24
PTPN6-201ENST00000318974 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
PTPN6-201ENST00000318974 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
PTPN6-201ENST00000318974 SOS2Q07890 1332 aaPredicted RBP16.51■□□□□ 0.23
PTPN6-201ENST00000318974 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
PTPN6-201ENST00000318974 PLEKHG5O94827 1062 aa16.51■□□□□ 0.23
PTPN6-201ENST00000318974 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
PTPN6-201ENST00000318974 IP6K1Q92551 441 aa16.51■□□□□ 0.23
PTPN6-201ENST00000318974 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
PTPN6-201ENST00000318974 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
PTPN6-201ENST00000318974 ARHGEF25Q86VW2 580 aa16.5■□□□□ 0.23
PTPN6-201ENST00000318974 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
PTPN6-201ENST00000318974 ZBTB7CA1YPR0 619 aa16.49■□□□□ 0.23
PTPN6-201ENST00000318974 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
PTPN6-201ENST00000318974 MED1Q15648 1581 aaPredicted RBP16.48■□□□□ 0.23
PTPN6-201ENST00000318974 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
PTPN6-201ENST00000318974 E9PSI1 815 aa16.47■□□□□ 0.23
PTPN6-201ENST00000318974 AEBP1Q8IUX7 1158 aa16.47■□□□□ 0.23
PTPN6-201ENST00000318974 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
PTPN6-201ENST00000318974 RGPD1P0DJD0 1748 aa16.47■□□□□ 0.23
PTPN6-201ENST00000318974 IGSF1Q8N6C5 1336 aa16.47■□□□□ 0.23
PTPN6-201ENST00000318974 PHRF1Q9P1Y6 1649 aaKnown RBP16.46■□□□□ 0.23
PTPN6-201ENST00000318974 RIPK4P57078 832 aa16.46■□□□□ 0.23
PTPN6-201ENST00000318974 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
PTPN6-201ENST00000318974 EYA1Q99502 592 aa16.46■□□□□ 0.23
PTPN6-201ENST00000318974 LTN1O94822 1766 aa16.46■□□□□ 0.23
PTPN6-201ENST00000318974 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
PTPN6-201ENST00000318974 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-201ENST00000318974 NFE2L2Q16236 605 aa16.45■□□□□ 0.22
PTPN6-201ENST00000318974 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
PTPN6-201ENST00000318974 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
PTPN6-201ENST00000318974 TRMT2AQ8IZ69 625 aaKnown RBP16.45■□□□□ 0.22
PTPN6-201ENST00000318974 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
PTPN6-201ENST00000318974 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
PTPN6-201ENST00000318974 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
PTPN6-201ENST00000318974 KDRP35968 1356 aa16.44■□□□□ 0.22
PTPN6-201ENST00000318974 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
PTPN6-201ENST00000318974 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
PTPN6-201ENST00000318974 ROBO1Q9Y6N7 1651 aa16.41■□□□□ 0.22
PTPN6-201ENST00000318974 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
PTPN6-201ENST00000318974 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
PTPN6-201ENST00000318974 AXIN2Q9Y2T1 843 aa16.4■□□□□ 0.22
PTPN6-201ENST00000318974 CPDO75976 1380 aa16.4■□□□□ 0.22
PTPN6-201ENST00000318974 CRYBG1Q9Y4K1 1723 aa16.4■□□□□ 0.22
PTPN6-201ENST00000318974 TOM1O60784 492 aa16.39■□□□□ 0.22
PTPN6-201ENST00000318974 IL16Q14005 1332 aa16.39■□□□□ 0.21
PTPN6-201ENST00000318974 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
PTPN6-201ENST00000318974 AHDC1Q5TGY3 1603 aaPredicted RBP16.38■□□□□ 0.21
PTPN6-201ENST00000318974 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
PTPN6-201ENST00000318974 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
PTPN6-201ENST00000318974 LRRC59Q96AG4 307 aaKnown RBP16.38■□□□□ 0.21
PTPN6-201ENST00000318974 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
PTPN6-201ENST00000318974 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
PTPN6-201ENST00000318974 ABCC6O95255 1503 aa16.37■□□□□ 0.21
PTPN6-201ENST00000318974 ERBB3P21860 1342 aa16.37■□□□□ 0.21
PTPN6-201ENST00000318974 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
PTPN6-201ENST00000318974 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
PTPN6-201ENST00000318974 CHRNA2Q15822 529 aa16.36■□□□□ 0.21
PTPN6-201ENST00000318974 MTHFSDQ2M296 383 aaKnown RBP16.35■□□□□ 0.21
PTPN6-201ENST00000318974 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
PTPN6-201ENST00000318974 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
PTPN6-201ENST00000318974 NCAPD2Q15021 1401 aa16.34■□□□□ 0.21
PTPN6-201ENST00000318974 COL18A1P39060 1754 aa16.33■□□□□ 0.21
PTPN6-201ENST00000318974 MSH5O43196 834 aa16.33■□□□□ 0.2
PTPN6-201ENST00000318974 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
PTPN6-201ENST00000318974 PLIN1O60240 522 aa16.33■□□□□ 0.2
PTPN6-201ENST00000318974 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
PTPN6-201ENST00000318974 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
PTPN6-201ENST00000318974 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
PTPN6-201ENST00000318974 CSB-PGBD3P0DP91 1061 aa16.31■□□□□ 0.2
PTPN6-201ENST00000318974 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
PTPN6-201ENST00000318974 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
PTPN6-201ENST00000318974 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
PTPN6-201ENST00000318974 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
PTPN6-201ENST00000318974 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
PTPN6-201ENST00000318974 ABCA3Q99758 1704 aa16.31■□□□□ 0.2
PTPN6-201ENST00000318974 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
PTPN6-201ENST00000318974 GNAI1P63096 354 aa16.3■□□□□ 0.2
PTPN6-201ENST00000318974 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms