RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 C8orf58Q8NAV2 365 aa18.84■□□□□ 0.61
CLK4-201ENST00000316308 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
CLK4-201ENST00000316308 KNDC1Q76NI1 1749 aa18.84■□□□□ 0.61
CLK4-201ENST00000316308 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
CLK4-201ENST00000316308 C1orf115Q9H7X2 142 aa18.84■□□□□ 0.61
CLK4-201ENST00000316308 CDK12Q9NYV4 1490 aaPredicted RBP18.83■□□□□ 0.61
CLK4-201ENST00000316308 NEFMP07197 916 aa18.83■□□□□ 0.6
CLK4-201ENST00000316308 SIRT1Q96EB6 747 aa18.83■□□□□ 0.6
CLK4-201ENST00000316308 PNNQ9H307 717 aaKnown RBP18.83■□□□□ 0.6
CLK4-201ENST00000316308 AATKQ6ZMQ8 1374 aa18.82■□□□□ 0.6
CLK4-201ENST00000316308 DLG5Q8TDM6 1919 aa18.82■□□□□ 0.6
CLK4-201ENST00000316308 AKAP12Q02952 1782 aa18.82■□□□□ 0.6
CLK4-201ENST00000316308 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
CLK4-201ENST00000316308 ZBTB40Q9NUA8 1239 aa18.82■□□□□ 0.6
CLK4-201ENST00000316308 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
CLK4-201ENST00000316308 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
CLK4-201ENST00000316308 DDRGK1Q96HY6 314 aa18.81■□□□□ 0.6
CLK4-201ENST00000316308 ZNF853P0CG23 659 aa18.8■□□□□ 0.6
CLK4-201ENST00000316308 DDX19BQ9UMR2 479 aa18.8■□□□□ 0.6
CLK4-201ENST00000316308 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
CLK4-201ENST00000316308 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
CLK4-201ENST00000316308 MCM10Q7L590 875 aa18.79■□□□□ 0.6
CLK4-201ENST00000316308 MRPL50Q8N5N7 158 aaKnown RBP18.79■□□□□ 0.6
CLK4-201ENST00000316308 NUTM2GQ5VZR2 741 aa18.78■□□□□ 0.6
CLK4-201ENST00000316308 FOXO3O43524 673 aa18.78■□□□□ 0.6
CLK4-201ENST00000316308 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.6
CLK4-201ENST00000316308 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
CLK4-201ENST00000316308 PEAK1Q9H792 1746 aa18.77■□□□□ 0.59
CLK4-201ENST00000316308 USP6P35125 1406 aa18.77■□□□□ 0.59
CLK4-201ENST00000316308 TWISTNBQ3B726 338 aaPredicted RBP18.77■□□□□ 0.59
CLK4-201ENST00000316308 MIS18AQ9NYP9 233 aa18.77■□□□□ 0.59
CLK4-201ENST00000316308 KIF16BQ96L93 1317 aa18.76■□□□□ 0.59
CLK4-201ENST00000316308 RGPD8O14715 1765 aaPredicted RBP18.76■□□□□ 0.59
CLK4-201ENST00000316308 PLEKHG3A1L390 1219 aa18.76■□□□□ 0.59
CLK4-201ENST00000316308 ALDH1L2Q3SY69 923 aa18.76■□□□□ 0.59
CLK4-201ENST00000316308 AAMPQ13685 434 aa18.76■□□□□ 0.59
CLK4-201ENST00000316308 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
CLK4-201ENST00000316308 EID1Q9Y6B2 187 aa18.76■□□□□ 0.59
CLK4-201ENST00000316308 OVOS2A0A0J9YW53 1432 aa18.75■□□□□ 0.59
CLK4-201ENST00000316308 OVOS2Q6IE36 1432 aa18.75■□□□□ 0.59
CLK4-201ENST00000316308 GNAI1P63096 354 aa18.75■□□□□ 0.59
CLK4-201ENST00000316308 CFAP44Q96MT7 982 aa18.75■□□□□ 0.59
CLK4-201ENST00000316308 NRKQ7Z2Y5 1582 aa18.75■□□□□ 0.59
CLK4-201ENST00000316308 HDAC1Q13547 482 aaPredicted RBP18.75■□□□□ 0.59
CLK4-201ENST00000316308 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
CLK4-201ENST00000316308 ZBTB7BO15156 539 aaPredicted RBP18.74■□□□□ 0.59
CLK4-201ENST00000316308 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
CLK4-201ENST00000316308 IPO8O15397 1037 aaKnown RBP18.73■□□□□ 0.59
CLK4-201ENST00000316308 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
CLK4-201ENST00000316308 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
CLK4-201ENST00000316308 SMC5Q8IY18 1101 aa18.73■□□□□ 0.59
CLK4-201ENST00000316308 KCNA6P17658 529 aa18.72■□□□□ 0.59
CLK4-201ENST00000316308 NFKBIBQ15653 356 aa18.72■□□□□ 0.59
CLK4-201ENST00000316308 SIRT2Q8IXJ6 389 aa18.72■□□□□ 0.59
CLK4-201ENST00000316308 DAXXQ9UER7 740 aaPredicted RBP18.72■□□□□ 0.59
CLK4-201ENST00000316308 NGDNQ8NEJ9 315 aaKnown RBP18.71■□□□□ 0.59
CLK4-201ENST00000316308 RIMS1Q86UR5 1692 aaKnown RBP18.71■□□□□ 0.59
CLK4-201ENST00000316308 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
CLK4-201ENST00000316308 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
CLK4-201ENST00000316308 TBX22Q9Y458 520 aa18.69■□□□□ 0.58
CLK4-201ENST00000316308 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
CLK4-201ENST00000316308 BRPF1P55201 1214 aaPredicted RBP18.68■□□□□ 0.58
CLK4-201ENST00000316308 MFAP1P55081 439 aaKnown RBP18.68■□□□□ 0.58
CLK4-201ENST00000316308 TBC1D32Q96NH3 1257 aa18.67■□□□□ 0.58
CLK4-201ENST00000316308 SLKQ9H2G2 1235 aaPredicted RBP18.67■□□□□ 0.58
CLK4-201ENST00000316308 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
CLK4-201ENST00000316308 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
CLK4-201ENST00000316308 SLIT1O75093 1534 aa18.67■□□□□ 0.58
CLK4-201ENST00000316308 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
CLK4-201ENST00000316308 SPRYD3Q8NCJ5 442 aa18.66■□□□□ 0.58
CLK4-201ENST00000316308 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
CLK4-201ENST00000316308 ABCC4O15439 1325 aa18.66■□□□□ 0.58
CLK4-201ENST00000316308 NUCB1Q02818 461 aa18.66■□□□□ 0.58
CLK4-201ENST00000316308 CALD1Q05682 793 aaKnown RBP18.66■□□□□ 0.58
CLK4-201ENST00000316308 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
CLK4-201ENST00000316308 DIP2AQ14689 1571 aa18.65■□□□□ 0.58
CLK4-201ENST00000316308 THEMISQ8N1K5 641 aaPredicted RBP18.65■□□□□ 0.58
CLK4-201ENST00000316308 EYA1Q99502 592 aa18.65■□□□□ 0.58
CLK4-201ENST00000316308 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
CLK4-201ENST00000316308 NLRP6P59044 892 aa18.64■□□□□ 0.57
CLK4-201ENST00000316308 LMOD3Q0VAK6 560 aa18.64■□□□□ 0.57
CLK4-201ENST00000316308 ANKRD45Q5TZF3 282 aa18.64■□□□□ 0.57
CLK4-201ENST00000316308 CHL1O00533 1208 aa18.64■□□□□ 0.57
CLK4-201ENST00000316308 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
CLK4-201ENST00000316308 NALCNQ8IZF0 1738 aa18.64■□□□□ 0.57
CLK4-201ENST00000316308 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
CLK4-201ENST00000316308 CEP170BQ9Y4F5 1589 aaPredicted RBP18.63■□□□□ 0.57
CLK4-201ENST00000316308 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
CLK4-201ENST00000316308 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
CLK4-201ENST00000316308 AMPHP49418 695 aa18.62■□□□□ 0.57
CLK4-201ENST00000316308 ARHGAP45Q92619 1136 aa18.62■□□□□ 0.57
CLK4-201ENST00000316308 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
CLK4-201ENST00000316308 RGPD1P0DJD0 1748 aa18.62■□□□□ 0.57
CLK4-201ENST00000316308 PIK3C2AO00443 1686 aa18.61■□□□□ 0.57
CLK4-201ENST00000316308 G2E3Q7L622 706 aa18.61■□□□□ 0.57
CLK4-201ENST00000316308 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
CLK4-201ENST00000316308 RGS12O14924 1447 aa18.6■□□□□ 0.57
CLK4-201ENST00000316308 CRB1P82279 1406 aa18.6■□□□□ 0.57
CLK4-201ENST00000316308 C14orf37Q86TY3 774 aa18.6■□□□□ 0.57
CLK4-201ENST00000316308 F6X3S4 739 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms