RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 ZBTB7CA1YPR0 619 aa17.16■□□□□ 0.34
ABCD3-201ENST00000315713 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
ABCD3-201ENST00000315713 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
ABCD3-201ENST00000315713 KAT6BQ8WYB5 2073 aa17.14■□□□□ 0.33
ABCD3-201ENST00000315713 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
ABCD3-201ENST00000315713 MYOM1P52179 1685 aa17.13■□□□□ 0.33
ABCD3-201ENST00000315713 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
ABCD3-201ENST00000315713 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
ABCD3-201ENST00000315713 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
ABCD3-201ENST00000315713 NFAT5O94916 1531 aa17.12■□□□□ 0.33
ABCD3-201ENST00000315713 NBPF14Q5TI25 921 aa17.11■□□□□ 0.33
ABCD3-201ENST00000315713 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
ABCD3-201ENST00000315713 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
ABCD3-201ENST00000315713 NLRP6P59044 892 aa17.1■□□□□ 0.33
ABCD3-201ENST00000315713 ABCC6O95255 1503 aa17.08■□□□□ 0.32
ABCD3-201ENST00000315713 TOM1L2Q6ZVM7 507 aa17.08■□□□□ 0.32
ABCD3-201ENST00000315713 BTAF1O14981 1849 aa17.07■□□□□ 0.32
ABCD3-201ENST00000315713 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
ABCD3-201ENST00000315713 DDB1Q16531 1140 aa17.07■□□□□ 0.32
ABCD3-201ENST00000315713 PTF1AQ7RTS3 328 aa17.07■□□□□ 0.32
ABCD3-201ENST00000315713 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
ABCD3-201ENST00000315713 EVC2Q86UK5 1308 aa17.06■□□□□ 0.32
ABCD3-201ENST00000315713 SPON1Q9HCB6 807 aa17.06■□□□□ 0.32
ABCD3-201ENST00000315713 PPP1R1BQ9UD71 204 aaPredicted RBP17.06■□□□□ 0.32
ABCD3-201ENST00000315713 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
ABCD3-201ENST00000315713 CHD4Q14839 1912 aa17.06■□□□□ 0.32
ABCD3-201ENST00000315713 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
ABCD3-201ENST00000315713 C11orf95C9JLR9 678 aaPredicted RBP17.05■□□□□ 0.32
ABCD3-201ENST00000315713 SOX12O15370 315 aa17.05■□□□□ 0.32
ABCD3-201ENST00000315713 KCNQ2O43526 872 aa17.04■□□□□ 0.32
ABCD3-201ENST00000315713 BCL9O00512 1426 aa17.04■□□□□ 0.32
ABCD3-201ENST00000315713 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
ABCD3-201ENST00000315713 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
ABCD3-201ENST00000315713 TTC21BQ7Z4L5 1316 aa17.03■□□□□ 0.32
ABCD3-201ENST00000315713 YY1P25490 414 aa17.03■□□□□ 0.32
ABCD3-201ENST00000315713 MARCH10Q8NA82 808 aaPredicted RBP17.03■□□□□ 0.32
ABCD3-201ENST00000315713 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.32
ABCD3-201ENST00000315713 ARHGEF25Q86VW2 580 aa17.02■□□□□ 0.32
ABCD3-201ENST00000315713 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
ABCD3-201ENST00000315713 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
ABCD3-201ENST00000315713 USP47Q96K76 1375 aa17.02■□□□□ 0.31
ABCD3-201ENST00000315713 PLSCR1O15162 318 aa17.01■□□□□ 0.31
ABCD3-201ENST00000315713 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
ABCD3-201ENST00000315713 UTRNP46939 3433 aa17.01■□□□□ 0.31
ABCD3-201ENST00000315713 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
ABCD3-201ENST00000315713 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
ABCD3-201ENST00000315713 CSB-PGBD3P0DP91 1061 aa17■□□□□ 0.31
ABCD3-201ENST00000315713 KTN1Q86UP2 1357 aaKnown RBP17■□□□□ 0.31
ABCD3-201ENST00000315713 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
ABCD3-201ENST00000315713 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
ABCD3-201ENST00000315713 CDCA7Q9BWT1 371 aaPredicted RBP16.99■□□□□ 0.31
ABCD3-201ENST00000315713 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
ABCD3-201ENST00000315713 PROM2Q8N271 834 aa16.98■□□□□ 0.31
ABCD3-201ENST00000315713 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
ABCD3-201ENST00000315713 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
ABCD3-201ENST00000315713 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
ABCD3-201ENST00000315713 SHANK3Q9BYB0 1731 aa16.97■□□□□ 0.31
ABCD3-201ENST00000315713 CCDC7Q96M83 1385 aa16.97■□□□□ 0.31
ABCD3-201ENST00000315713 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
ABCD3-201ENST00000315713 SLC24A1O60721 1099 aa16.96■□□□□ 0.31
ABCD3-201ENST00000315713 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
ABCD3-201ENST00000315713 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
ABCD3-201ENST00000315713 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
ABCD3-201ENST00000315713 TESK2Q96S53 571 aa16.94■□□□□ 0.3
ABCD3-201ENST00000315713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.34e-7■■□□□ 13.1
ABCD3-201ENST00000315713 ERBB3P21860 1342 aa16.93■□□□□ 0.3
ABCD3-201ENST00000315713 USP31Q70CQ4 1352 aa16.92■□□□□ 0.3
ABCD3-201ENST00000315713 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
ABCD3-201ENST00000315713 EXOC5O00471 708 aa16.92■□□□□ 0.3
ABCD3-201ENST00000315713 PTGER2P43116 358 aa16.92■□□□□ 0.3
ABCD3-201ENST00000315713 TMF1P82094 1093 aa16.92■□□□□ 0.3
ABCD3-201ENST00000315713 STK32BQ9NY57 414 aa16.92■□□□□ 0.3
ABCD3-201ENST00000315713 COL24A1Q17RW2 1714 aa16.92■□□□□ 0.3
ABCD3-201ENST00000315713 LY75O60449 1722 aa16.91■□□□□ 0.3
ABCD3-201ENST00000315713 NME9Q86XW9 330 aa16.91■□□□□ 0.3
ABCD3-201ENST00000315713 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
ABCD3-201ENST00000315713 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
ABCD3-201ENST00000315713 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
ABCD3-201ENST00000315713 SLC15A2Q16348 729 aa16.9■□□□□ 0.3
ABCD3-201ENST00000315713 ACSBG1Q96GR2 724 aa16.9■□□□□ 0.3
ABCD3-201ENST00000315713 EDC4Q6P2E9 1401 aaKnown RBP16.89■□□□□ 0.29
ABCD3-201ENST00000315713 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
ABCD3-201ENST00000315713 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
ABCD3-201ENST00000315713 GOLGB1Q14789 3259 aaKnown RBP16.89■□□□□ 0.29
ABCD3-201ENST00000315713 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
ABCD3-201ENST00000315713 A0A1W2PP64 1363 aa16.87■□□□□ 0.29
ABCD3-201ENST00000315713 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
ABCD3-201ENST00000315713 IL2RBP14784 551 aa16.86■□□□□ 0.29
ABCD3-201ENST00000315713 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
ABCD3-201ENST00000315713 FHDC1Q9C0D6 1143 aaPredicted RBP16.86■□□□□ 0.29
ABCD3-201ENST00000315713 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
ABCD3-201ENST00000315713 HDGFL2Q7Z4V5 671 aaPredicted RBP16.85■□□□□ 0.29
ABCD3-201ENST00000315713 SGIP1Q9BQI5 828 aa16.85■□□□□ 0.29
ABCD3-201ENST00000315713 MTFR1LQ9H019 292 aa16.85■□□□□ 0.29
ABCD3-201ENST00000315713 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
ABCD3-201ENST00000315713 ZNF827Q17R98 1081 aa16.84■□□□□ 0.29
ABCD3-201ENST00000315713 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
ABCD3-201ENST00000315713 SYT17Q9BSW7 474 aa16.83■□□□□ 0.28
ABCD3-201ENST00000315713 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
ABCD3-201ENST00000315713 C5P01031 1676 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms