RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
CDC42-201ENST00000315554 MYOM1P52179 1685 aa10.9□□□□□ -0.66
CDC42-201ENST00000315554 NME9Q86XW9 330 aa10.9□□□□□ -0.66
CDC42-201ENST00000315554 COL22A1Q8NFW1 1626 aaPredicted RBP10.9□□□□□ -0.66
CDC42-201ENST00000315554 SSH2Q76I76 1423 aa10.9□□□□□ -0.66
CDC42-201ENST00000315554 ANKRD36BQ8N2N9 1353 aa10.89□□□□□ -0.67
CDC42-201ENST00000315554 NINLQ9Y2I6 1382 aa10.89□□□□□ -0.67
CDC42-201ENST00000315554 C8orf37Q96NL8 207 aa10.89□□□□□ -0.67
CDC42-201ENST00000315554 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
CDC42-201ENST00000315554 SOX12O15370 315 aa10.88□□□□□ -0.67
CDC42-201ENST00000315554 NLRP6P59044 892 aa10.88□□□□□ -0.67
CDC42-201ENST00000315554 NRKQ7Z2Y5 1582 aa10.88□□□□□ -0.67
CDC42-201ENST00000315554 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
CDC42-201ENST00000315554 EDC4Q6P2E9 1401 aaKnown RBP10.87□□□□□ -0.67
CDC42-201ENST00000315554 ARXQ96QS3 562 aa10.87□□□□□ -0.67
CDC42-201ENST00000315554 CARD14Q9BXL6 1004 aa10.87□□□□□ -0.67
CDC42-201ENST00000315554 WASHC2AQ641Q2 1341 aa10.87□□□□□ -0.67
CDC42-201ENST00000315554 PIK3C2AO00443 1686 aa10.87□□□□□ -0.67
CDC42-201ENST00000315554 CCDC7Q96M83 1385 aa10.87□□□□□ -0.67
CDC42-201ENST00000315554 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
CDC42-201ENST00000315554 PANK3Q9H999 370 aa10.87□□□□□ -0.67
CDC42-201ENST00000315554 TTC21AQ8NDW8 1320 aa10.86□□□□□ -0.67
CDC42-201ENST00000315554 ABCA3Q99758 1704 aa10.86□□□□□ -0.67
CDC42-201ENST00000315554 BRD4O60885 1362 aaPredicted RBP10.86□□□□□ -0.67
CDC42-201ENST00000315554 NSD3Q9BZ95 1437 aa10.86□□□□□ -0.67
CDC42-201ENST00000315554 ZC3H6P61129 1189 aaKnown RBP10.86□□□□□ -0.67
CDC42-201ENST00000315554 NLRP13Q86W25 1043 aa10.86□□□□□ -0.67
CDC42-201ENST00000315554 NGLY1Q96IV0 654 aa10.86□□□□□ -0.67
CDC42-201ENST00000315554 CRYBG1Q9Y4K1 1723 aa10.85□□□□□ -0.67
CDC42-201ENST00000315554 CHRNA2Q15822 529 aa10.85□□□□□ -0.67
CDC42-201ENST00000315554 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
CDC42-201ENST00000315554 USP19O94966 1318 aa10.85□□□□□ -0.67
CDC42-201ENST00000315554 AFF2P51816 1311 aa10.85□□□□□ -0.67
CDC42-201ENST00000315554 PHRF1Q9P1Y6 1649 aaKnown RBP10.84□□□□□ -0.67
CDC42-201ENST00000315554 RGS17Q9UGC6 210 aaPredicted RBP10.84□□□□□ -0.67
CDC42-201ENST00000315554 KIAA0232Q92628 1395 aa10.84□□□□□ -0.67
CDC42-201ENST00000315554 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
CDC42-201ENST00000315554 GCP02774 474 aa10.83□□□□□ -0.68
CDC42-201ENST00000315554 CNGB1Q14028 1251 aaPredicted RBP10.83□□□□□ -0.68
CDC42-201ENST00000315554 MARF1Q9Y4F3 1742 aaKnown RBP10.82□□□□□ -0.68
CDC42-201ENST00000315554 FYB1O15117 783 aa10.82□□□□□ -0.68
CDC42-201ENST00000315554 FBLN1P23142 703 aa10.82□□□□□ -0.68
CDC42-201ENST00000315554 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
CDC42-201ENST00000315554 PRDM11Q9NQV5 511 aa10.82□□□□□ -0.68
CDC42-201ENST00000315554 POTEAQ6S8J7 498 aa10.81□□□□□ -0.68
CDC42-201ENST00000315554 FAM163AQ96GL9 167 aaPredicted RBP10.81□□□□□ -0.68
CDC42-201ENST00000315554 COG3Q96JB2 828 aa10.81□□□□□ -0.68
CDC42-201ENST00000315554 USP31Q70CQ4 1352 aa10.81□□□□□ -0.68
CDC42-201ENST00000315554 SLIT3O75094 1523 aa10.81□□□□□ -0.68
CDC42-201ENST00000315554 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
CDC42-201ENST00000315554 USP21Q9UK80 565 aa10.81□□□□□ -0.68
CDC42-201ENST00000315554 OVOS2A0A0J9YW53 1432 aa10.8□□□□□ -0.68
CDC42-201ENST00000315554 OVOS2Q6IE36 1432 aa10.8□□□□□ -0.68
CDC42-201ENST00000315554 CGNL1Q0VF96 1302 aa10.8□□□□□ -0.68
CDC42-201ENST00000315554 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
CDC42-201ENST00000315554 BTG4Q9NY30 223 aa10.8□□□□□ -0.68
CDC42-201ENST00000315554 NFAT5O94916 1531 aa10.79□□□□□ -0.68
CDC42-201ENST00000315554 TNNT2P45379 298 aaPredicted RBP10.79□□□□□ -0.68
CDC42-201ENST00000315554 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
CDC42-201ENST00000315554 KNSTRNQ9Y448 316 aa10.79□□□□□ -0.68
CDC42-201ENST00000315554 KIF20BQ96Q89 1820 aa10.79□□□□□ -0.68
CDC42-201ENST00000315554 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
CDC42-201ENST00000315554 SLIT2O94813 1529 aa10.78□□□□□ -0.68
CDC42-201ENST00000315554 BCL9LQ86UU0 1499 aa10.78□□□□□ -0.68
CDC42-201ENST00000315554 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
CDC42-201ENST00000315554 KCNH5Q8NCM2 988 aa10.78□□□□□ -0.68
CDC42-201ENST00000315554 QTRT2Q9H974 415 aaKnown RBP10.78□□□□□ -0.68
CDC42-201ENST00000315554 STRN4Q9NRL3 753 aa10.78□□□□□ -0.68
CDC42-201ENST00000315554 COL14A1Q05707 1796 aaKnown RBP10.77□□□□□ -0.68
CDC42-201ENST00000315554 CPDO75976 1380 aa10.77□□□□□ -0.68
CDC42-201ENST00000315554 USP54Q70EL1 1684 aa10.77□□□□□ -0.69
CDC42-201ENST00000315554 RRS1Q15050 365 aaKnown RBP10.77□□□□□ -0.69
CDC42-201ENST00000315554 CC2D1BQ5T0F9 858 aaKnown RBP10.77□□□□□ -0.69
CDC42-201ENST00000315554 ARHGEF25Q86VW2 580 aa10.77□□□□□ -0.69
CDC42-201ENST00000315554 UNC5CLQ8IV45 518 aa10.77□□□□□ -0.69
CDC42-201ENST00000315554 CCDC9Q9Y3X0 531 aaKnown RBP10.77□□□□□ -0.69
CDC42-201ENST00000315554 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
CDC42-201ENST00000315554 DDX10Q13206 875 aaKnown RBP10.76□□□□□ -0.69
CDC42-201ENST00000315554 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
CDC42-201ENST00000315554 CAMTA1Q9Y6Y1 1673 aa10.76□□□□□ -0.69
CDC42-201ENST00000315554 ILDR2Q71H61 639 aa10.75□□□□□ -0.69
CDC42-201ENST00000315554 ATRNO75882 1429 aa10.75□□□□□ -0.69
CDC42-201ENST00000315554 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
CDC42-201ENST00000315554 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
CDC42-201ENST00000315554 EVA1CP58658 441 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 MORC1Q86VD1 984 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
CDC42-201ENST00000315554 TRPC5Q9UL62 973 aaPredicted RBP10.74□□□□□ -0.69
CDC42-201ENST00000315554 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 AATKQ6ZMQ8 1374 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 NRAPQ86VF7 1730 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 LMO7Q8WWI1 1683 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
CDC42-201ENST00000315554 PPM1GO15355 546 aaPredicted RBP10.74□□□□□ -0.69
CDC42-201ENST00000315554 AMPHP49418 695 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 LARP1Q6PKG0 1096 aaKnown RBP10.74□□□□□ -0.69
CDC42-201ENST00000315554 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 USP35Q9P2H5 1018 aa10.74□□□□□ -0.69
CDC42-201ENST00000315554 LTN1O94822 1766 aa10.73□□□□□ -0.69
CDC42-201ENST00000315554 COL18A1P39060 1754 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms