RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 COL16A1Q07092 1604 aaPredicted RBP32.91■■■□□ 2.86
CDPF1-201ENST00000314567 U2SURPO15042 1029 aaKnown RBP32.91■■■□□ 2.86
CDPF1-201ENST00000314567 HOXC9P31274 260 aa32.89■■■□□ 2.86
CDPF1-201ENST00000314567 LRRC59Q96AG4 307 aaKnown RBP32.89■■■□□ 2.86
CDPF1-201ENST00000314567 FLT4P35916 1363 aa32.89■■■□□ 2.86
CDPF1-201ENST00000314567 IL13P35225 146 aa32.88■■■□□ 2.85
CDPF1-201ENST00000314567 ARHGEF25Q86VW2 580 aa32.88■■■□□ 2.85
CDPF1-201ENST00000314567 CCDC146Q8IYE0 955 aa32.88■■■□□ 2.85
CDPF1-201ENST00000314567 U2AF1L5P0DN76 240 aaPredicted RBP32.87■■■□□ 2.85
CDPF1-201ENST00000314567 U2AF1Q01081 240 aaKnown RBP eCLIP32.87■■■□□ 2.85
CDPF1-201ENST00000314567 EIF4A2Q14240 407 aaKnown RBP32.87■■■□□ 2.85
CDPF1-201ENST00000314567 NGEFQ8N5V2 710 aa32.87■■■□□ 2.85
CDPF1-201ENST00000314567 ABCA3Q99758 1704 aa32.87■■■□□ 2.85
CDPF1-201ENST00000314567 SALL2Q9Y467 1007 aaPredicted RBP32.85■■■□□ 2.85
CDPF1-201ENST00000314567 ERICH6BQ5W0A0 696 aa32.84■■■□□ 2.85
CDPF1-201ENST00000314567 LTV1Q96GA3 475 aaPredicted RBP32.84■■■□□ 2.85
CDPF1-201ENST00000314567 CHRNA2Q15822 529 aa32.82■■■□□ 2.84
CDPF1-201ENST00000314567 IP6K1Q92551 441 aa32.82■■■□□ 2.84
CDPF1-201ENST00000314567 HAP1P54257 671 aaPredicted RBP32.81■■■□□ 2.84
CDPF1-201ENST00000314567 AXIN2Q9Y2T1 843 aa32.81■■■□□ 2.84
CDPF1-201ENST00000314567 RGPD5Q99666 1765 aa32.81■■■□□ 2.84
CDPF1-201ENST00000314567 KIAA0232Q92628 1395 aa32.81■■■□□ 2.84
CDPF1-201ENST00000314567 HMOX1P09601 288 aa32.79■■■□□ 2.84
CDPF1-201ENST00000314567 ZNF521Q96K83 1311 aa32.79■■■□□ 2.84
CDPF1-201ENST00000314567 RTL1A6NKG5 1358 aa32.79■■■□□ 2.84
CDPF1-201ENST00000314567 RNF123Q5XPI4 1314 aa32.78■■■□□ 2.84
CDPF1-201ENST00000314567 KIF24Q5T7B8 1368 aa32.78■■■□□ 2.84
CDPF1-201ENST00000314567 COL22A1Q8NFW1 1626 aaPredicted RBP32.75■■■□□ 2.83
CDPF1-201ENST00000314567 COL18A1P39060 1754 aa32.75■■■□□ 2.83
CDPF1-201ENST00000314567 APAF1O14727 1248 aa32.74■■■□□ 2.83
CDPF1-201ENST00000314567 AEBP1Q8IUX7 1158 aa32.74■■■□□ 2.83
CDPF1-201ENST00000314567 RGPD1P0DJD0 1748 aa32.73■■■□□ 2.83
CDPF1-201ENST00000314567 RUNDC1Q96C34 613 aa32.73■■■□□ 2.83
CDPF1-201ENST00000314567 CPDO75976 1380 aa32.72■■■□□ 2.83
CDPF1-201ENST00000314567 RGPD2P0DJD1 1756 aa32.72■■■□□ 2.83
CDPF1-201ENST00000314567 CDCA7LQ96GN5 454 aa32.71■■■□□ 2.83
CDPF1-201ENST00000314567 EYA1Q99502 592 aa32.71■■■□□ 2.83
CDPF1-201ENST00000314567 PRDM11Q9NQV5 511 aa32.71■■■□□ 2.83
CDPF1-201ENST00000314567 SULT6B1Q6IMI4 303 aa32.69■■■□□ 2.82
CDPF1-201ENST00000314567 RSPH6AQ9H0K4 717 aa32.69■■■□□ 2.82
CDPF1-201ENST00000314567 HSPA1LP34931 641 aa32.69■■■□□ 2.82
CDPF1-201ENST00000314567 GOLGA2Q08379 1002 aa32.69■■■□□ 2.82
CDPF1-201ENST00000314567 PLEKHF1Q96S99 279 aa32.69■■■□□ 2.82
CDPF1-201ENST00000314567 NCBP3Q53F19 620 aaKnown RBP32.68■■■□□ 2.82
CDPF1-201ENST00000314567 USHBP1Q8N6Y0 703 aa32.68■■■□□ 2.82
CDPF1-201ENST00000314567 ANKRD24Q8TF21 1146 aa32.68■■■□□ 2.82
CDPF1-201ENST00000314567 PRKAR2BP31323 418 aa32.67■■■□□ 2.82
CDPF1-201ENST00000314567 FAM83GA6ND36 823 aa32.66■■■□□ 2.82
CDPF1-201ENST00000314567 NUTM2BA6NNL0 878 aaPredicted RBP32.66■■■□□ 2.82
CDPF1-201ENST00000314567 NUTM2EB1AL46 878 aaPredicted RBP32.66■■■□□ 2.82
CDPF1-201ENST00000314567 NUTM2AQ8IVF1 878 aaPredicted RBP32.66■■■□□ 2.82
CDPF1-201ENST00000314567 RRP7AQ9Y3A4 280 aaKnown RBP32.65■■■□□ 2.82
CDPF1-201ENST00000314567 RCAN3Q9UKA8 241 aa32.65■■■□□ 2.82
CDPF1-201ENST00000314567 FCHSD2O94868 740 aa32.64■■■□□ 2.82
CDPF1-201ENST00000314567 NBPF6Q5VWK0 638 aa32.64■■■□□ 2.82
CDPF1-201ENST00000314567 NBPF4Q96M43 638 aa32.64■■■□□ 2.82
CDPF1-201ENST00000314567 IGSF1Q8N6C5 1336 aa32.64■■■□□ 2.82
CDPF1-201ENST00000314567 IRX6P78412 446 aaPredicted RBP32.63■■■□□ 2.81
CDPF1-201ENST00000314567 PELP1Q8IZL8 1130 aaKnown RBP32.63■■■□□ 2.81
CDPF1-201ENST00000314567 CAMTA1Q9Y6Y1 1673 aa32.63■■■□□ 2.81
CDPF1-201ENST00000314567 ADAMTS2O95450 1211 aa32.63■■■□□ 2.81
CDPF1-201ENST00000314567 PHACTR3Q96KR7 559 aa32.63■■■□□ 2.81
CDPF1-201ENST00000314567 ERBB3P21860 1342 aa32.63■■■□□ 2.81
CDPF1-201ENST00000314567 LMO7Q8WWI1 1683 aa32.62■■■□□ 2.81
CDPF1-201ENST00000314567 NEUROD2Q15784 382 aa32.62■■■□□ 2.81
CDPF1-201ENST00000314567 TCP11L2Q8N4U5 519 aa32.62■■■□□ 2.81
CDPF1-201ENST00000314567 SLFN5Q08AF3 891 aa32.59■■■□□ 2.81
CDPF1-201ENST00000314567 DUSP27Q5VZP5 1158 aa32.59■■■□□ 2.81
CDPF1-201ENST00000314567 JCADQ9P266 1359 aa32.58■■■□□ 2.81
CDPF1-201ENST00000314567 PNNQ9H307 717 aaKnown RBP32.58■■■□□ 2.81
CDPF1-201ENST00000314567 CCDC27Q2M243 656 aa32.57■■■□□ 2.8
CDPF1-201ENST00000314567 MAPK8IP3Q9UPT6 1336 aa32.57■■■□□ 2.8
CDPF1-201ENST00000314567 TRMT2AQ8IZ69 625 aaKnown RBP32.57■■■□□ 2.8
CDPF1-201ENST00000314567 ABCC6O95255 1503 aa32.57■■■□□ 2.8
CDPF1-201ENST00000314567 E9PSI1 815 aa32.56■■■□□ 2.8
CDPF1-201ENST00000314567 CSB-PGBD3P0DP91 1061 aa32.56■■■□□ 2.8
CDPF1-201ENST00000314567 PHF23Q9BUL5 403 aaPredicted RBP32.55■■■□□ 2.8
CDPF1-201ENST00000314567 KDRP35968 1356 aa32.55■■■□□ 2.8
CDPF1-201ENST00000314567 RRP1P56182 461 aaKnown RBP32.54■■■□□ 2.8
CDPF1-201ENST00000314567 WWC1Q8IX03 1113 aa32.54■■■□□ 2.8
CDPF1-201ENST00000314567 NLRP2Q9NX02 1062 aa32.54■■■□□ 2.8
CDPF1-201ENST00000314567 PPP4R2Q9NY27 417 aa32.54■■■□□ 2.8
CDPF1-201ENST00000314567 STRN4Q9NRL3 753 aa32.53■■■□□ 2.8
CDPF1-201ENST00000314567 COL5A2P05997 1499 aaPredicted RBP32.53■■■□□ 2.8
CDPF1-201ENST00000314567 BTG4Q9NY30 223 aa32.52■■■□□ 2.8
CDPF1-201ENST00000314567 COL14A1Q05707 1796 aaKnown RBP32.51■■■□□ 2.8
CDPF1-201ENST00000314567 TMPOP42166 694 aaKnown RBP32.51■■■□□ 2.79
CDPF1-201ENST00000314567 WDR63Q8IWG1 891 aa32.48■■■□□ 2.79
CDPF1-201ENST00000314567 NEFMP07197 916 aa32.47■■■□□ 2.79
CDPF1-201ENST00000314567 LARP1Q6PKG0 1096 aaKnown RBP32.47■■■□□ 2.79
CDPF1-201ENST00000314567 LRP6O75581 1613 aa32.47■■■□□ 2.79
CDPF1-201ENST00000314567 PLCH1Q4KWH8 1693 aa32.46■■■□□ 2.79
CDPF1-201ENST00000314567 WDR17Q8IZU2 1322 aa32.46■■■□□ 2.79
CDPF1-201ENST00000314567 FAM208AQ9UK61 1670 aaKnown RBP32.46■■■□□ 2.79
CDPF1-201ENST00000314567 EVA1CP58658 441 aa32.46■■■□□ 2.79
CDPF1-201ENST00000314567 NCAPD2Q15021 1401 aa32.45■■■□□ 2.79
CDPF1-201ENST00000314567 RIPK4P57078 832 aa32.45■■■□□ 2.79
CDPF1-201ENST00000314567 DLG5Q8TDM6 1919 aa32.45■■■□□ 2.78
CDPF1-201ENST00000314567 TOM1L2Q6ZVM7 507 aa32.44■■■□□ 2.78
CDPF1-201ENST00000314567 NFE2L2Q16236 605 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms