RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 RSPH6AQ9H0K4 717 aa29.69■■■□□ 2.34
IRF3-201ENST00000309877 SOS2Q07890 1332 aaPredicted RBP29.68■■■□□ 2.34
IRF3-201ENST00000309877 ZBTB7CA1YPR0 619 aa29.68■■■□□ 2.34
IRF3-201ENST00000309877 NEUROD2Q15784 382 aa29.67■■■□□ 2.34
IRF3-201ENST00000309877 PRKAR2BP31323 418 aa29.66■■■□□ 2.34
IRF3-201ENST00000309877 RRP7AQ9Y3A4 280 aaKnown RBP29.66■■■□□ 2.34
IRF3-201ENST00000309877 IQSEC2Q5JU85 1478 aa29.66■■■□□ 2.34
IRF3-201ENST00000309877 IP6K1Q92551 441 aa29.66■■■□□ 2.34
IRF3-201ENST00000309877 ZNF521Q96K83 1311 aa29.65■■■□□ 2.34
IRF3-201ENST00000309877 NCBP3Q53F19 620 aaKnown RBP29.63■■■□□ 2.33
IRF3-201ENST00000309877 ARHGEF25Q86VW2 580 aa29.63■■■□□ 2.33
IRF3-201ENST00000309877 GOLGA2Q08379 1002 aa29.63■■■□□ 2.33
IRF3-201ENST00000309877 CDCA7LQ96GN5 454 aa29.63■■■□□ 2.33
IRF3-201ENST00000309877 MED1Q15648 1581 aaPredicted RBP29.61■■■□□ 2.33
IRF3-201ENST00000309877 LTN1O94822 1766 aa29.61■■■□□ 2.33
IRF3-201ENST00000309877 SULT6B1Q6IMI4 303 aa29.61■■■□□ 2.33
IRF3-201ENST00000309877 WWC1Q8IX03 1113 aa29.6■■■□□ 2.33
IRF3-201ENST00000309877 GTF3C3Q9Y5Q9 886 aa29.6■■■□□ 2.33
IRF3-201ENST00000309877 TMPOP42166 694 aaKnown RBP29.6■■■□□ 2.33
IRF3-201ENST00000309877 CCDC27Q2M243 656 aa29.6■■■□□ 2.33
IRF3-201ENST00000309877 LTV1Q96GA3 475 aaPredicted RBP29.6■■■□□ 2.33
IRF3-201ENST00000309877 NHSL1Q5SYE7 1610 aa29.58■■■□□ 2.33
IRF3-201ENST00000309877 ZC3H6P61129 1189 aaKnown RBP29.58■■■□□ 2.33
IRF3-201ENST00000309877 CABLES1Q8TDN4 633 aa29.58■■■□□ 2.33
IRF3-201ENST00000309877 AEBP1Q8IUX7 1158 aa29.57■■■□□ 2.32
IRF3-201ENST00000309877 EYA1Q99502 592 aa29.57■■■□□ 2.32
IRF3-201ENST00000309877 PHF23Q9BUL5 403 aaPredicted RBP29.56■■■□□ 2.32
IRF3-201ENST00000309877 PHRF1Q9P1Y6 1649 aaKnown RBP29.55■■■□□ 2.32
IRF3-201ENST00000309877 RIPK4P57078 832 aa29.55■■■□□ 2.32
IRF3-201ENST00000309877 PHACTR3Q96KR7 559 aa29.55■■■□□ 2.32
IRF3-201ENST00000309877 IGSF1Q8N6C5 1336 aa29.55■■■□□ 2.32
IRF3-201ENST00000309877 RGPD1P0DJD0 1748 aa29.54■■■□□ 2.32
IRF3-201ENST00000309877 TOM1O60784 492 aa29.53■■■□□ 2.32
IRF3-201ENST00000309877 ROBO1Q9Y6N7 1651 aa29.53■■■□□ 2.32
IRF3-201ENST00000309877 SLFN5Q08AF3 891 aa29.53■■■□□ 2.32
IRF3-201ENST00000309877 NFE2L2Q16236 605 aa29.53■■■□□ 2.32
IRF3-201ENST00000309877 WDR63Q8IWG1 891 aa29.53■■■□□ 2.32
IRF3-201ENST00000309877 SUPT16HQ9Y5B9 1047 aaKnown RBP29.53■■■□□ 2.32
IRF3-201ENST00000309877 E9PSI1 815 aa29.52■■■□□ 2.32
IRF3-201ENST00000309877 HAP1P54257 671 aaPredicted RBP29.5■■■□□ 2.31
IRF3-201ENST00000309877 LRRC59Q96AG4 307 aaKnown RBP29.49■■■□□ 2.31
IRF3-201ENST00000309877 KDRP35968 1356 aa29.48■■■□□ 2.31
IRF3-201ENST00000309877 TRIM35Q9UPQ4 493 aa29.48■■■□□ 2.31
IRF3-201ENST00000309877 DUSP27Q5VZP5 1158 aa29.47■■■□□ 2.31
IRF3-201ENST00000309877 ANKRD24Q8TF21 1146 aa29.47■■■□□ 2.31
IRF3-201ENST00000309877 AXIN2Q9Y2T1 843 aa29.47■■■□□ 2.31
IRF3-201ENST00000309877 AHDC1Q5TGY3 1603 aaPredicted RBP29.46■■■□□ 2.31
IRF3-201ENST00000309877 CRYBG1Q9Y4K1 1723 aa29.46■■■□□ 2.31
IRF3-201ENST00000309877 TRMT2AQ8IZ69 625 aaKnown RBP29.46■■■□□ 2.31
IRF3-201ENST00000309877 SPINK5Q9NQ38 1064 aaPredicted RBP29.46■■■□□ 2.31
IRF3-201ENST00000309877 CPDO75976 1380 aa29.45■■■□□ 2.31
IRF3-201ENST00000309877 NEFLP07196 543 aa29.45■■■□□ 2.31
IRF3-201ENST00000309877 PIP4K2BP78356 416 aa29.44■■■□□ 2.3
IRF3-201ENST00000309877 KIAA0232Q92628 1395 aa29.44■■■□□ 2.3
IRF3-201ENST00000309877 NBPF6Q5VWK0 638 aa29.44■■■□□ 2.3
IRF3-201ENST00000309877 NBPF4Q96M43 638 aa29.44■■■□□ 2.3
IRF3-201ENST00000309877 UBAP1LF5GYI3 381 aa29.43■■■□□ 2.3
IRF3-201ENST00000309877 LMOD3Q0VAK6 560 aa29.43■■■□□ 2.3
IRF3-201ENST00000309877 CHRNA2Q15822 529 aa29.42■■■□□ 2.3
IRF3-201ENST00000309877 USHBP1Q8N6Y0 703 aa29.42■■■□□ 2.3
IRF3-201ENST00000309877 RCAN3Q9UKA8 241 aa29.4■■■□□ 2.3
IRF3-201ENST00000309877 PRDM11Q9NQV5 511 aa29.4■■■□□ 2.3
IRF3-201ENST00000309877 MYH16Q9H6N6 1097 aa29.39■■■□□ 2.3
IRF3-201ENST00000309877 ABCC6O95255 1503 aa29.39■■■□□ 2.3
IRF3-201ENST00000309877 ERBB3P21860 1342 aa29.39■■■□□ 2.29
IRF3-201ENST00000309877 IL16Q14005 1332 aa29.38■■■□□ 2.29
IRF3-201ENST00000309877 CALD1Q05682 793 aaKnown RBP29.37■■■□□ 2.29
IRF3-201ENST00000309877 GAS2L2Q8NHY3 880 aa29.36■■■□□ 2.29
IRF3-201ENST00000309877 CSB-PGBD3P0DP91 1061 aa29.35■■■□□ 2.29
IRF3-201ENST00000309877 MTHFSDQ2M296 383 aaKnown RBP29.35■■■□□ 2.29
IRF3-201ENST00000309877 COL18A1P39060 1754 aa29.35■■■□□ 2.29
IRF3-201ENST00000309877 CERKQ8TCT0 537 aa29.34■■■□□ 2.29
IRF3-201ENST00000309877 ABCA3Q99758 1704 aa29.33■■■□□ 2.29
IRF3-201ENST00000309877 RGPD5Q99666 1765 aa29.33■■■□□ 2.29
IRF3-201ENST00000309877 FKBP8Q14318 412 aa29.33■■■□□ 2.29
IRF3-201ENST00000309877 NLRP2Q9NX02 1062 aa29.33■■■□□ 2.29
IRF3-201ENST00000309877 PHLPP1O60346 1717 aa29.32■■■□□ 2.28
IRF3-201ENST00000309877 THUMPD2Q9BTF0 503 aaKnown RBP29.31■■■□□ 2.28
IRF3-201ENST00000309877 NCAPD2Q15021 1401 aa29.3■■■□□ 2.28
IRF3-201ENST00000309877 RGPD2P0DJD1 1756 aa29.3■■■□□ 2.28
IRF3-201ENST00000309877 FAM83GA6ND36 823 aa29.29■■■□□ 2.28
IRF3-201ENST00000309877 RTF1Q92541 710 aaKnown RBP29.28■■■□□ 2.28
IRF3-201ENST00000309877 DLG5Q8TDM6 1919 aa29.28■■■□□ 2.28
IRF3-201ENST00000309877 RNF123Q5XPI4 1314 aa29.28■■■□□ 2.28
IRF3-201ENST00000309877 DCTN1Q14203 1278 aa29.28■■■□□ 2.28
IRF3-201ENST00000309877 LAS1LQ9Y4W2 734 aaKnown RBP29.28■■■□□ 2.28
IRF3-201ENST00000309877 COL16A1Q07092 1604 aaPredicted RBP29.27■■■□□ 2.28
IRF3-201ENST00000309877 FANCIQ9NVI1 1328 aa29.27■■■□□ 2.28
IRF3-201ENST00000309877 TSR2Q969E8 191 aaKnown RBP29.27■■■□□ 2.28
IRF3-201ENST00000309877 CAMTA1Q9Y6Y1 1673 aa29.26■■■□□ 2.27
IRF3-201ENST00000309877 COL22A1Q8NFW1 1626 aaPredicted RBP29.25■■■□□ 2.27
IRF3-201ENST00000309877 GNAI1P63096 354 aa29.25■■■□□ 2.27
IRF3-201ENST00000309877 PLEKHO1Q53GL0 409 aaPredicted RBP29.25■■■□□ 2.27
IRF3-201ENST00000309877 IFT57Q9NWB7 429 aa29.25■■■□□ 2.27
IRF3-201ENST00000309877 HTATSF1O43719 755 aaKnown RBP29.25■■■□□ 2.27
IRF3-201ENST00000309877 MCM10Q7L590 875 aa29.25■■■□□ 2.27
IRF3-201ENST00000309877 GNAT3A8MTJ3 354 aa29.24■■■□□ 2.27
IRF3-201ENST00000309877 IRX6P78412 446 aaPredicted RBP29.24■■■□□ 2.27
IRF3-201ENST00000309877 AMOTQ4VCS5 1084 aa29.24■■■□□ 2.27
IRF3-201ENST00000309877 LMO7Q8WWI1 1683 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms