RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 ZNF692Q9BU19 519 aaPredicted RBP25.2■■□□□ 1.62
LRFN4-201ENST00000309602 DAXXQ9UER7 740 aaPredicted RBP25.2■■□□□ 1.62
LRFN4-201ENST00000309602 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.18■■□□□ 1.62
LRFN4-201ENST00000309602 PLEKHG1Q9ULL1 1385 aa25.18■■□□□ 1.62
LRFN4-201ENST00000309602 IPO8O15397 1037 aaKnown RBP25.17■■□□□ 1.62
LRFN4-201ENST00000309602 HDAC1Q13547 482 aaPredicted RBP25.16■■□□□ 1.62
LRFN4-201ENST00000309602 CEBPAP49715 358 aaPredicted RBP25.15■■□□□ 1.62
LRFN4-201ENST00000309602 CALD1Q05682 793 aaKnown RBP25.15■■□□□ 1.62
LRFN4-201ENST00000309602 ZBTB40Q9NUA8 1239 aa25.14■■□□□ 1.62
LRFN4-201ENST00000309602 ZNF428Q96B54 188 aa25.14■■□□□ 1.61
LRFN4-201ENST00000309602 IFT57Q9NWB7 429 aa25.14■■□□□ 1.61
LRFN4-201ENST00000309602 USP35Q9P2H5 1018 aa25.14■■□□□ 1.61
LRFN4-201ENST00000309602 VAMP4O75379 141 aa25.13■■□□□ 1.61
LRFN4-201ENST00000309602 ZNF853P0CG23 659 aa25.13■■□□□ 1.61
LRFN4-201ENST00000309602 PRKCSHP14314 528 aaPredicted RBP25.13■■□□□ 1.61
LRFN4-201ENST00000309602 BRPF1P55201 1214 aaPredicted RBP25.13■■□□□ 1.61
LRFN4-201ENST00000309602 GNAI1P63096 354 aa25.13■■□□□ 1.61
LRFN4-201ENST00000309602 TTC21BQ7Z4L5 1316 aa25.13■■□□□ 1.61
LRFN4-201ENST00000309602 TSPYL6Q8N831 410 aa25.13■■□□□ 1.61
LRFN4-201ENST00000309602 NRKQ7Z2Y5 1582 aa25.12■■□□□ 1.61
LRFN4-201ENST00000309602 ACEP12821 1306 aa25.12■■□□□ 1.61
LRFN4-201ENST00000309602 TOPAZ1Q8N9V7 1692 aa25.12■■□□□ 1.61
LRFN4-201ENST00000309602 NUTM2FA1L443 756 aa25.12■■□□□ 1.61
LRFN4-201ENST00000309602 MBIPQ9NS73 344 aa25.12■■□□□ 1.61
LRFN4-201ENST00000309602 PTPRUQ92729 1446 aa25.12■■□□□ 1.61
LRFN4-201ENST00000309602 DLG5Q8TDM6 1919 aa25.12■■□□□ 1.61
LRFN4-201ENST00000309602 SLC26A8Q96RN1 970 aa25.11■■□□□ 1.61
LRFN4-201ENST00000309602 PLEKHG3A1L390 1219 aa25.1■■□□□ 1.61
LRFN4-201ENST00000309602 MRPL50Q8N5N7 158 aaKnown RBP25.1■■□□□ 1.61
LRFN4-201ENST00000309602 FAM83GA6ND36 823 aa25.08■■□□□ 1.61
LRFN4-201ENST00000309602 LMOD3Q0VAK6 560 aa25.08■■□□□ 1.61
LRFN4-201ENST00000309602 SMC5Q8IY18 1101 aa25.08■■□□□ 1.61
LRFN4-201ENST00000309602 OVOS2A0A0J9YW53 1432 aa25.08■■□□□ 1.61
LRFN4-201ENST00000309602 OVOS2Q6IE36 1432 aa25.08■■□□□ 1.61
LRFN4-201ENST00000309602 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
LRFN4-201ENST00000309602 USP6P35125 1406 aa25.07■■□□□ 1.6
LRFN4-201ENST00000309602 ELL2O00472 640 aaPredicted RBP25.07■■□□□ 1.6
LRFN4-201ENST00000309602 CFAP44Q96MT7 982 aa25.07■■□□□ 1.6
LRFN4-201ENST00000309602 AEBP1Q8IUX7 1158 aa25.06■■□□□ 1.6
LRFN4-201ENST00000309602 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
LRFN4-201ENST00000309602 EID1Q9Y6B2 187 aa25.05■■□□□ 1.6
LRFN4-201ENST00000309602 PTCH1Q13635 1447 aa25.05■■□□□ 1.6
LRFN4-201ENST00000309602 DCTN1Q14203 1278 aa25.05■■□□□ 1.6
LRFN4-201ENST00000309602 NFKBIBQ15653 356 aa25.04■■□□□ 1.6
LRFN4-201ENST00000309602 TWISTNBQ3B726 338 aaPredicted RBP25.04■■□□□ 1.6
LRFN4-201ENST00000309602 C8orf58Q8NAV2 365 aa25.04■■□□□ 1.6
LRFN4-201ENST00000309602 ARHGAP45Q92619 1136 aa25.04■■□□□ 1.6
LRFN4-201ENST00000309602 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
LRFN4-201ENST00000309602 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
LRFN4-201ENST00000309602 AMOTL2Q9Y2J4 779 aa25.03■■□□□ 1.6
LRFN4-201ENST00000309602 TBC1D32Q96NH3 1257 aa25.02■■□□□ 1.6
LRFN4-201ENST00000309602 SLIT1O75093 1534 aa25.02■■□□□ 1.6
LRFN4-201ENST00000309602 ARHGAP23Q9P227 1491 aa25.02■■□□□ 1.6
LRFN4-201ENST00000309602 UPF2Q9HAU5 1272 aaKnown RBP25.02■■□□□ 1.6
LRFN4-201ENST00000309602 PEAK1Q9H792 1746 aa25.02■■□□□ 1.6
LRFN4-201ENST00000309602 NALCNQ8IZF0 1738 aa25.01■■□□□ 1.59
LRFN4-201ENST00000309602 ZBTB7BO15156 539 aaPredicted RBP25.01■■□□□ 1.59
LRFN4-201ENST00000309602 SSH2Q76I76 1423 aa25■■□□□ 1.59
LRFN4-201ENST00000309602 USP31Q70CQ4 1352 aa25■■□□□ 1.59
LRFN4-201ENST00000309602 HSP90AB2PQ58FF8 381 aa25■■□□□ 1.59
LRFN4-201ENST00000309602 TBX22Q9Y458 520 aa24.98■■□□□ 1.59
LRFN4-201ENST00000309602 ABCC4O15439 1325 aa24.98■■□□□ 1.59
LRFN4-201ENST00000309602 NUCB1Q02818 461 aa24.97■■□□□ 1.59
LRFN4-201ENST00000309602 SOX12O15370 315 aa24.97■■□□□ 1.59
LRFN4-201ENST00000309602 BECN1Q14457 450 aa24.96■■□□□ 1.59
LRFN4-201ENST00000309602 C1orf115Q9H7X2 142 aa24.95■■□□□ 1.59
LRFN4-201ENST00000309602 RGPD1P0DJD0 1748 aa24.95■■□□□ 1.58
LRFN4-201ENST00000309602 LNPKQ9C0E8 428 aa24.94■■□□□ 1.58
LRFN4-201ENST00000309602 CHMP4BQ9H444 224 aaKnown RBP24.94■■□□□ 1.58
LRFN4-201ENST00000309602 TTC21AQ8NDW8 1320 aa24.93■■□□□ 1.58
LRFN4-201ENST00000309602 DIP2AQ14689 1571 aa24.93■■□□□ 1.58
LRFN4-201ENST00000309602 FER1L4A9Z1Z3 1794 aa24.93■■□□□ 1.58
LRFN4-201ENST00000309602 MCM10Q7L590 875 aa24.92■■□□□ 1.58
LRFN4-201ENST00000309602 CHD1LQ86WJ1 897 aa24.92■■□□□ 1.58
LRFN4-201ENST00000309602 MAP3K19Q56UN5 1328 aa24.92■■□□□ 1.58
LRFN4-201ENST00000309602 API5Q9BZZ5 524 aaKnown RBP24.92■■□□□ 1.58
LRFN4-201ENST00000309602 KRT24Q2M2I5 525 aa24.91■■□□□ 1.58
LRFN4-201ENST00000309602 THEMISQ8N1K5 641 aaPredicted RBP24.91■■□□□ 1.58
LRFN4-201ENST00000309602 CHL1O00533 1208 aa24.9■■□□□ 1.58
LRFN4-201ENST00000309602 RGPD8O14715 1765 aaPredicted RBP24.9■■□□□ 1.58
LRFN4-201ENST00000309602 MFAP1P55081 439 aaKnown RBP24.9■■□□□ 1.58
LRFN4-201ENST00000309602 SIRT2Q8IXJ6 389 aa24.9■■□□□ 1.58
LRFN4-201ENST00000309602 NGDNQ8NEJ9 315 aaKnown RBP24.9■■□□□ 1.58
LRFN4-201ENST00000309602 FRAT2O75474 233 aaPredicted RBP24.88■■□□□ 1.57
LRFN4-201ENST00000309602 GCC1Q96CN9 775 aa24.88■■□□□ 1.57
LRFN4-201ENST00000309602 ARHGEF10O15013 1369 aa24.88■■□□□ 1.57
LRFN4-201ENST00000309602 TBC1D2Q9BYX2 928 aa24.87■■□□□ 1.57
LRFN4-201ENST00000309602 C22orf23Q9BZE7 217 aa24.87■■□□□ 1.57
LRFN4-201ENST00000309602 ANKRD45Q5TZF3 282 aa24.86■■□□□ 1.57
LRFN4-201ENST00000309602 FMN2Q9NZ56 1722 aa24.86■■□□□ 1.57
LRFN4-201ENST00000309602 XRN1Q8IZH2 1706 aaKnown RBP24.86■■□□□ 1.57
LRFN4-201ENST00000309602 SBNO1A3KN83 1393 aa24.86■■□□□ 1.57
LRFN4-201ENST00000309602 FLT4P35916 1363 aa24.86■■□□□ 1.57
LRFN4-201ENST00000309602 CRB1P82279 1406 aa24.85■■□□□ 1.57
LRFN4-201ENST00000309602 SLKQ9H2G2 1235 aaPredicted RBP24.84■■□□□ 1.57
LRFN4-201ENST00000309602 KIAA0232Q92628 1395 aa24.84■■□□□ 1.57
LRFN4-201ENST00000309602 PIK3C2AO00443 1686 aa24.84■■□□□ 1.57
LRFN4-201ENST00000309602 KIF24Q5T7B8 1368 aa24.84■■□□□ 1.57
LRFN4-201ENST00000309602 FOXO3O43524 673 aa24.83■■□□□ 1.56
LRFN4-201ENST00000309602 RGS12O14924 1447 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms