RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 PNPLA6Q8IY17 1366 aa14.13□□□□□ -0.15
CASP3-201ENST00000308394 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
CASP3-201ENST00000308394 DDX17Q92841 729 aaKnown RBP14.13□□□□□ -0.15
CASP3-201ENST00000308394 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
CASP3-201ENST00000308394 SHPRHQ149N8 1683 aa14.12□□□□□ -0.15
CASP3-201ENST00000308394 XIRP1Q702N8 1843 aaKnown RBP14.12□□□□□ -0.15
CASP3-201ENST00000308394 APAF1O14727 1248 aa14.12□□□□□ -0.15
CASP3-201ENST00000308394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.11□□□□□ -0.15
CASP3-201ENST00000308394 SLAIN2Q9P270 581 aa14.11□□□□□ -0.15
CASP3-201ENST00000308394 COL3A1P02461 1466 aaPredicted RBP14.11□□□□□ -0.15
CASP3-201ENST00000308394 KIF1AQ12756 1690 aa14.1□□□□□ -0.15
CASP3-201ENST00000308394 RUNDC1Q96C34 613 aa14.1□□□□□ -0.15
CASP3-201ENST00000308394 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
CASP3-201ENST00000308394 AMPHP49418 695 aa14.09□□□□□ -0.15
CASP3-201ENST00000308394 CDK12Q9NYV4 1490 aaPredicted RBP14.09□□□□□ -0.15
CASP3-201ENST00000308394 MAP3K19Q56UN5 1328 aa14.09□□□□□ -0.15
CASP3-201ENST00000308394 NPHP3Q7Z494 1330 aa14.09□□□□□ -0.15
CASP3-201ENST00000308394 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
CASP3-201ENST00000308394 HSP90AB2PQ58FF8 381 aa14.08□□□□□ -0.15
CASP3-201ENST00000308394 BRINP3Q76B58 766 aa14.08□□□□□ -0.15
CASP3-201ENST00000308394 IL13P35225 146 aa14.08□□□□□ -0.16
CASP3-201ENST00000308394 NEUROD2Q15784 382 aa14.08□□□□□ -0.16
CASP3-201ENST00000308394 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
CASP3-201ENST00000308394 ZBTB7CA1YPR0 619 aa14.07□□□□□ -0.16
CASP3-201ENST00000308394 HMOX1P09601 288 aa14.07□□□□□ -0.16
CASP3-201ENST00000308394 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
CASP3-201ENST00000308394 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
CASP3-201ENST00000308394 RRP7AQ9Y3A4 280 aaKnown RBP14.07□□□□□ -0.16
CASP3-201ENST00000308394 KCNH5Q8NCM2 988 aa14.06□□□□□ -0.16
CASP3-201ENST00000308394 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
CASP3-201ENST00000308394 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
CASP3-201ENST00000308394 EIF4A2Q14240 407 aaKnown RBP14.06□□□□□ -0.16
CASP3-201ENST00000308394 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
CASP3-201ENST00000308394 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
CASP3-201ENST00000308394 SBNO1A3KN83 1393 aa14.05□□□□□ -0.16
CASP3-201ENST00000308394 FCHSD2O94868 740 aa14.05□□□□□ -0.16
CASP3-201ENST00000308394 FLT4P35916 1363 aa14.05□□□□□ -0.16
CASP3-201ENST00000308394 GCP02774 474 aa14.04□□□□□ -0.16
CASP3-201ENST00000308394 NEFMP07197 916 aa14.04□□□□□ -0.16
CASP3-201ENST00000308394 PLEKHF1Q96S99 279 aa14.04□□□□□ -0.16
CASP3-201ENST00000308394 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
CASP3-201ENST00000308394 MARF1Q9Y4F3 1742 aaKnown RBP14.03□□□□□ -0.16
CASP3-201ENST00000308394 PEAK1Q9H792 1746 aa14.03□□□□□ -0.16
CASP3-201ENST00000308394 TRPM3Q9HCF6 1732 aaPredicted RBP14.03□□□□□ -0.16
CASP3-201ENST00000308394 HOXC9P31274 260 aa14.03□□□□□ -0.16
CASP3-201ENST00000308394 NGEFQ8N5V2 710 aa14.03□□□□□ -0.16
CASP3-201ENST00000308394 SUPT16HQ9Y5B9 1047 aaKnown RBP14.02□□□□□ -0.16
CASP3-201ENST00000308394 USP54Q70EL1 1684 aa14.02□□□□□ -0.17
CASP3-201ENST00000308394 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
CASP3-201ENST00000308394 BCCIPQ9P287 314 aaKnown RBP eCLIP14.02□□□□□ -0.17
CASP3-201ENST00000308394 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
CASP3-201ENST00000308394 SULT6B1Q6IMI4 303 aa14.01□□□□□ -0.17
CASP3-201ENST00000308394 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
CASP3-201ENST00000308394 ZMYND15Q9H091 742 aa14.01□□□□□ -0.17
CASP3-201ENST00000308394 SPATA31A3Q5VYP0 1347 aa14.01□□□□□ -0.17
CASP3-201ENST00000308394 ZBTB4Q9P1Z0 1013 aaPredicted RBP14□□□□□ -0.17
CASP3-201ENST00000308394 ZNF521Q96K83 1311 aa14□□□□□ -0.17
CASP3-201ENST00000308394 KIF24Q5T7B8 1368 aa14□□□□□ -0.17
CASP3-201ENST00000308394 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
CASP3-201ENST00000308394 PXDNQ92626 1479 aa14□□□□□ -0.17
CASP3-201ENST00000308394 CABLES1Q8TDN4 633 aa14□□□□□ -0.17
CASP3-201ENST00000308394 USP19O94966 1318 aa14□□□□□ -0.17
CASP3-201ENST00000308394 LTBP4Q8N2S1 1624 aa14□□□□□ -0.17
CASP3-201ENST00000308394 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
CASP3-201ENST00000308394 ZC3H6P61129 1189 aaKnown RBP13.99□□□□□ -0.17
CASP3-201ENST00000308394 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
CASP3-201ENST00000308394 AEBP1Q8IUX7 1158 aa13.99□□□□□ -0.17
CASP3-201ENST00000308394 IP6K1Q92551 441 aa13.99□□□□□ -0.17
CASP3-201ENST00000308394 NFAT5O94916 1531 aa13.99□□□□□ -0.17
CASP3-201ENST00000308394 RIPK4P57078 832 aa13.98□□□□□ -0.17
CASP3-201ENST00000308394 ARHGEF25Q86VW2 580 aa13.98□□□□□ -0.17
CASP3-201ENST00000308394 PHACTR3Q96KR7 559 aa13.98□□□□□ -0.17
CASP3-201ENST00000308394 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
CASP3-201ENST00000308394 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
CASP3-201ENST00000308394 SLIT3O75094 1523 aa13.98□□□□□ -0.17
CASP3-201ENST00000308394 RTL1A6NKG5 1358 aa13.98□□□□□ -0.17
CASP3-201ENST00000308394 ARHGEF10O15013 1369 aa13.98□□□□□ -0.17
CASP3-201ENST00000308394 EYA1Q99502 592 aa13.97□□□□□ -0.17
CASP3-201ENST00000308394 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
CASP3-201ENST00000308394 LTN1O94822 1766 aa13.96□□□□□ -0.17
CASP3-201ENST00000308394 SLFN5Q08AF3 891 aa13.96□□□□□ -0.17
CASP3-201ENST00000308394 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
CASP3-201ENST00000308394 E9PSI1 815 aa13.95□□□□□ -0.18
CASP3-201ENST00000308394 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
CASP3-201ENST00000308394 NFE2L2Q16236 605 aa13.95□□□□□ -0.18
CASP3-201ENST00000308394 DUSP27Q5VZP5 1158 aa13.95□□□□□ -0.18
CASP3-201ENST00000308394 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
CASP3-201ENST00000308394 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
CASP3-201ENST00000308394 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
CASP3-201ENST00000308394 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
CASP3-201ENST00000308394 FKBP8Q14318 412 aa13.94□□□□□ -0.18
CASP3-201ENST00000308394 AXIN2Q9Y2T1 843 aa13.93□□□□□ -0.18
CASP3-201ENST00000308394 GLIPR1L2Q4G1C9 344 aa13.93□□□□□ -0.18
CASP3-201ENST00000308394 USHBP1Q8N6Y0 703 aa13.93□□□□□ -0.18
CASP3-201ENST00000308394 TOM1O60784 492 aa13.92□□□□□ -0.18
CASP3-201ENST00000308394 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
CASP3-201ENST00000308394 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
CASP3-201ENST00000308394 ANKRD24Q8TF21 1146 aa13.92□□□□□ -0.18
CASP3-201ENST00000308394 CHRNA2Q15822 529 aa13.91□□□□□ -0.18
CASP3-201ENST00000308394 NBPF6Q5VWK0 638 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms