RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 MIA2Q96PC5 1412 aa16.92■□□□□ 0.3
SPRED1-201ENST00000299084 MPHOSPH6Q99547 160 aaKnown RBP16.92■□□□□ 0.3
SPRED1-201ENST00000299084 ZNF287Q9HBT7 754 aa16.92■□□□□ 0.3
SPRED1-201ENST00000299084 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
SPRED1-201ENST00000299084 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
SPRED1-201ENST00000299084 NUCB2P80303 420 aa16.92■□□□□ 0.3
SPRED1-201ENST00000299084 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
SPRED1-201ENST00000299084 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
SPRED1-201ENST00000299084 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
SPRED1-201ENST00000299084 DDX54Q8TDD1 881 aaKnown RBP16.92■□□□□ 0.3
SPRED1-201ENST00000299084 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
SPRED1-201ENST00000299084 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
SPRED1-201ENST00000299084 LETM1O95202 739 aaPredicted RBP16.91■□□□□ 0.3
SPRED1-201ENST00000299084 CCDC144AA2RUR9 1427 aa16.9■□□□□ 0.3
SPRED1-201ENST00000299084 SEC63Q9UGP8 760 aaKnown RBP16.9■□□□□ 0.3
SPRED1-201ENST00000299084 SERPINC1P01008 464 aa16.9■□□□□ 0.3
SPRED1-201ENST00000299084 FERP16591 822 aa16.9■□□□□ 0.3
SPRED1-201ENST00000299084 FERMT1Q9BQL6 677 aa16.9■□□□□ 0.3
SPRED1-201ENST00000299084 TTC16Q8NEE8 873 aa16.9■□□□□ 0.3
SPRED1-201ENST00000299084 LRRC45Q96CN5 670 aa16.89■□□□□ 0.29
SPRED1-201ENST00000299084 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
SPRED1-201ENST00000299084 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
SPRED1-201ENST00000299084 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
SPRED1-201ENST00000299084 HOOK3Q86VS8 718 aa16.89■□□□□ 0.29
SPRED1-201ENST00000299084 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
SPRED1-201ENST00000299084 STK38Q15208 465 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 PIBF1Q8WXW3 757 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 EHMT1Q9H9B1 1298 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 CCDC18Q5T9S5 1454 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 ZPR1O75312 459 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
SPRED1-201ENST00000299084 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 CCDC39Q9UFE4 941 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 PDCP20941 246 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 TDO2P48775 406 aa16.88■□□□□ 0.29
SPRED1-201ENST00000299084 LRRFIP2Q9Y608 721 aaKnown RBP16.88■□□□□ 0.29
SPRED1-201ENST00000299084 SLU7O95391 586 aaKnown RBP16.87■□□□□ 0.29
SPRED1-201ENST00000299084 SPATA24Q86W54 205 aa16.87■□□□□ 0.29
SPRED1-201ENST00000299084 MAP2K1Q02750 393 aaPredicted RBP16.87■□□□□ 0.29
SPRED1-201ENST00000299084 TICAM2Q86XR7 235 aa16.87■□□□□ 0.29
SPRED1-201ENST00000299084 ZNF397Q8NF99 534 aaPredicted RBP16.87■□□□□ 0.29
SPRED1-201ENST00000299084 NLRP6P59044 892 aa16.87■□□□□ 0.29
SPRED1-201ENST00000299084 FAM69CQ0P6D2 419 aa16.87■□□□□ 0.29
SPRED1-201ENST00000299084 GNAI1P63096 354 aa16.87■□□□□ 0.29
SPRED1-201ENST00000299084 CUL5Q93034 780 aa16.87■□□□□ 0.29
SPRED1-201ENST00000299084 ZNF354CQ86Y25 554 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 ZNF652Q9Y2D9 606 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 MTERF4Q7Z6M4 381 aaKnown RBP16.86■□□□□ 0.29
SPRED1-201ENST00000299084 TSNARE1Q96NA8 513 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 HMOX1P09601 288 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 BICDL1Q6ZP65 573 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 TAF4BQ92750 862 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 UBAC1Q9BSL1 405 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 PANK3Q9H999 370 aa16.86■□□□□ 0.29
SPRED1-201ENST00000299084 CTNNA2P26232 953 aa16.85■□□□□ 0.29
SPRED1-201ENST00000299084 NFKBIBQ15653 356 aa16.85■□□□□ 0.29
SPRED1-201ENST00000299084 USP8P40818 1118 aa16.85■□□□□ 0.29
SPRED1-201ENST00000299084 CEBPZQ03701 1054 aaKnown RBP16.85■□□□□ 0.29
SPRED1-201ENST00000299084 CFAP57Q96MR6 1250 aa16.85■□□□□ 0.29
SPRED1-201ENST00000299084 DZIP1LQ8IYY4 767 aaKnown RBP16.85■□□□□ 0.29
SPRED1-201ENST00000299084 UQCRHLA0A096LP55 91 aa16.84■□□□□ 0.29
SPRED1-201ENST00000299084 IGHMBP2P38935 993 aaKnown RBP16.84■□□□□ 0.29
SPRED1-201ENST00000299084 RNF214Q8ND24 703 aa16.84■□□□□ 0.29
SPRED1-201ENST00000299084 DHX8Q14562 1220 aaKnown RBP16.84■□□□□ 0.29
SPRED1-201ENST00000299084 KIAA1328Q86T90 577 aa16.84■□□□□ 0.29
SPRED1-201ENST00000299084 LRP2BPQ9P2M1 347 aa16.84■□□□□ 0.29
SPRED1-201ENST00000299084 CEP57L1Q8IYX8 460 aa16.84■□□□□ 0.29
SPRED1-201ENST00000299084 SMC1AQ14683 1233 aaKnown RBP16.83■□□□□ 0.29
SPRED1-201ENST00000299084 ERLIN1O75477 346 aa16.83■□□□□ 0.29
SPRED1-201ENST00000299084 CDKL5O76039 1030 aa16.83■□□□□ 0.29
SPRED1-201ENST00000299084 RAI14Q9P0K7 980 aa16.83■□□□□ 0.29
SPRED1-201ENST00000299084 ANKIB1Q9P2G1 1089 aa16.83■□□□□ 0.29
SPRED1-201ENST00000299084 RAB3IL1Q8TBN0 382 aa16.83■□□□□ 0.28
SPRED1-201ENST00000299084 CFAP45Q9UL16 551 aa16.83■□□□□ 0.28
SPRED1-201ENST00000299084 RBM10P98175 930 aaKnown RBP16.83■□□□□ 0.28
SPRED1-201ENST00000299084 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
SPRED1-201ENST00000299084 FAM177A1Q8N128 213 aaPredicted RBP16.83■□□□□ 0.28
SPRED1-201ENST00000299084 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
SPRED1-201ENST00000299084 CTNNBL1Q8WYA6 563 aaPredicted RBP16.82■□□□□ 0.28
SPRED1-201ENST00000299084 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
SPRED1-201ENST00000299084 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
SPRED1-201ENST00000299084 POLR3DP05423 398 aaPredicted RBP16.82■□□□□ 0.28
SPRED1-201ENST00000299084 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
SPRED1-201ENST00000299084 ARL1P40616 181 aaPredicted RBP16.82■□□□□ 0.28
SPRED1-201ENST00000299084 NASPP49321 788 aaPredicted RBP16.82■□□□□ 0.28
SPRED1-201ENST00000299084 FKBP4Q02790 459 aaKnown RBP eCLIP16.82■□□□□ 0.28
SPRED1-201ENST00000299084 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
SPRED1-201ENST00000299084 GAS2L2Q8NHY3 880 aa16.81■□□□□ 0.28
SPRED1-201ENST00000299084 MYBBP1AQ9BQG0 1328 aaKnown RBP16.81■□□□□ 0.28
SPRED1-201ENST00000299084 LMAN1P49257 510 aa16.81■□□□□ 0.28
SPRED1-201ENST00000299084 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
SPRED1-201ENST00000299084 LRRCC1Q9C099 1032 aa16.81■□□□□ 0.28
SPRED1-201ENST00000299084 CCDC113Q9H0I3 377 aa16.81■□□□□ 0.28
SPRED1-201ENST00000299084 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
SPRED1-201ENST00000299084 CLEC11AQ9Y240 323 aa16.8■□□□□ 0.28
SPRED1-201ENST00000299084 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
SPRED1-201ENST00000299084 UQCRHP07919 91 aa16.8■□□□□ 0.28
SPRED1-201ENST00000299084 DHX57Q6P158 1386 aaKnown RBP16.8■□□□□ 0.28
SPRED1-201ENST00000299084 LIG1P18858 919 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms