RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 GPT2Q8TD30 523 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 FAM177BA6PVY3 158 aa13.91□□□□□ -0.18
TRUB1-201ENST00000298746 GSPT1P15170 499 aaKnown RBP13.91□□□□□ -0.18
TRUB1-201ENST00000298746 RILPL2Q969X0 211 aa13.91□□□□□ -0.18
TRUB1-201ENST00000298746 CDC42BPBQ9Y5S2 1711 aa13.91□□□□□ -0.18
TRUB1-201ENST00000298746 MCCP23508 829 aa13.91□□□□□ -0.18
TRUB1-201ENST00000298746 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
TRUB1-201ENST00000298746 CBX1P83916 185 aa13.9□□□□□ -0.18
TRUB1-201ENST00000298746 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
TRUB1-201ENST00000298746 ANO2Q9NQ90 1003 aa13.9□□□□□ -0.18
TRUB1-201ENST00000298746 TTC22Q5TAA0 569 aa13.9□□□□□ -0.18
TRUB1-201ENST00000298746 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
TRUB1-201ENST00000298746 TTC37Q6PGP7 1564 aa13.9□□□□□ -0.18
TRUB1-201ENST00000298746 ZNF500O60304 480 aaPredicted RBP13.9□□□□□ -0.18
TRUB1-201ENST00000298746 SDSP20132 328 aa13.9□□□□□ -0.18
TRUB1-201ENST00000298746 IL16Q14005 1332 aa13.9□□□□□ -0.19
TRUB1-201ENST00000298746 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 C14orf93Q9H972 538 aaKnown RBP13.89□□□□□ -0.19
TRUB1-201ENST00000298746 NSFL1CQ9UNZ2 370 aaKnown RBP13.89□□□□□ -0.19
TRUB1-201ENST00000298746 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 VAMP4O75379 141 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 CHAF1AQ13111 956 aaPredicted RBP13.89□□□□□ -0.19
TRUB1-201ENST00000298746 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 PLEKHF1Q96S99 279 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 UGGT1Q9NYU2 1555 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 PHF14O94880 888 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 TERF1P54274 439 aa13.89□□□□□ -0.19
TRUB1-201ENST00000298746 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
TRUB1-201ENST00000298746 IQGAP1P46940 1657 aa13.88□□□□□ -0.19
TRUB1-201ENST00000298746 FCHSD2O94868 740 aa13.88□□□□□ -0.19
TRUB1-201ENST00000298746 ERC2O15083 957 aa13.88□□□□□ -0.19
TRUB1-201ENST00000298746 FYB1O15117 783 aa13.88□□□□□ -0.19
TRUB1-201ENST00000298746 VGFO15240 615 aaPredicted RBP13.88□□□□□ -0.19
TRUB1-201ENST00000298746 RNF17Q9BXT8 1623 aaKnown RBP13.88□□□□□ -0.19
TRUB1-201ENST00000298746 TSHZ3Q63HK5 1081 aa13.87□□□□□ -0.19
TRUB1-201ENST00000298746 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 MCM5P33992 734 aa13.87□□□□□ -0.19
TRUB1-201ENST00000298746 JARID2Q92833 1246 aaPredicted RBP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 PHACTR3Q96KR7 559 aa13.87□□□□□ -0.19
TRUB1-201ENST00000298746 BCL11BQ9C0K0 894 aaPredicted RBP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 C17orf53Q8N3J3 647 aaPredicted RBP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 TTC12Q9H892 705 aaPredicted RBP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
TRUB1-201ENST00000298746 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRUB1-201ENST00000298746 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
TRUB1-201ENST00000298746 ZNF428Q96B54 188 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 ANKRD36BQ8N2N9 1353 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 SOX12O15370 315 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 C8orf58Q8NAV2 365 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 TMX3Q96JJ7 454 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 CD109Q6YHK3 1445 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 HMMRO75330 724 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 NFE2L2Q16236 605 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
TRUB1-201ENST00000298746 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
TRUB1-201ENST00000298746 PLCH2O75038 1416 aa13.85□□□□□ -0.19
TRUB1-201ENST00000298746 PRAM1Q96QH2 718 aa13.85□□□□□ -0.19
TRUB1-201ENST00000298746 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
TRUB1-201ENST00000298746 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRUB1-201ENST00000298746 MYOM1P52179 1685 aa13.84□□□□□ -0.19
TRUB1-201ENST00000298746 CLTCL1P53675 1640 aa13.84□□□□□ -0.19
TRUB1-201ENST00000298746 SPC24Q8NBT2 197 aa13.84□□□□□ -0.19
TRUB1-201ENST00000298746 PDLIM2Q96JY6 352 aa13.84□□□□□ -0.19
TRUB1-201ENST00000298746 TRPM2O94759 1503 aa13.84□□□□□ -0.19
TRUB1-201ENST00000298746 DCTPP1Q9H773 170 aa13.84□□□□□ -0.19
TRUB1-201ENST00000298746 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.19
TRUB1-201ENST00000298746 HMGN5P82970 282 aaKnown RBP13.83□□□□□ -0.19
TRUB1-201ENST00000298746 DRC7Q8IY82 874 aa13.83□□□□□ -0.19
TRUB1-201ENST00000298746 A0A1W2PP64 1363 aa13.83□□□□□ -0.2
TRUB1-201ENST00000298746 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
TRUB1-201ENST00000298746 ARHGAP45Q92619 1136 aa13.83□□□□□ -0.2
TRUB1-201ENST00000298746 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.2
TRUB1-201ENST00000298746 KIF3AQ9Y496 699 aa13.83□□□□□ -0.2
TRUB1-201ENST00000298746 NSD2O96028 1365 aa13.83□□□□□ -0.2
TRUB1-201ENST00000298746 CEP152O94986 1710 aa13.83□□□□□ -0.2
TRUB1-201ENST00000298746 LMOD3Q0VAK6 560 aa13.83□□□□□ -0.2
TRUB1-201ENST00000298746 FIBPO43427 364 aa13.82□□□□□ -0.2
TRUB1-201ENST00000298746 HCLS1P14317 486 aaPredicted RBP13.82□□□□□ -0.2
TRUB1-201ENST00000298746 PPP4R3BQ5MIZ7 849 aa13.82□□□□□ -0.2
TRUB1-201ENST00000298746 EXOC6BQ9Y2D4 811 aa13.82□□□□□ -0.2
TRUB1-201ENST00000298746 ADCY5O95622 1261 aa13.82□□□□□ -0.2
TRUB1-201ENST00000298746 NOLC1Q14978 699 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRUB1-201ENST00000298746 KRT24Q2M2I5 525 aa13.82□□□□□ -0.2
TRUB1-201ENST00000298746 SMAP1Q8IYB5 467 aaPredicted RBP13.82□□□□□ -0.2
TRUB1-201ENST00000298746 LARP6Q9BRS8 491 aaKnown RBP13.82□□□□□ -0.2
TRUB1-201ENST00000298746 CCDC94Q9BW85 323 aaPredicted RBP13.82□□□□□ -0.2
TRUB1-201ENST00000298746 ZDHHC9Q9Y397 364 aa13.82□□□□□ -0.2
TRUB1-201ENST00000298746 SBNO2Q9Y2G9 1366 aa13.82□□□□□ -0.2
TRUB1-201ENST00000298746 EMILIN1Q9Y6C2 1016 aa13.81□□□□□ -0.2
TRUB1-201ENST00000298746 IGSF3O75054 1194 aa13.81□□□□□ -0.2
TRUB1-201ENST00000298746 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
TRUB1-201ENST00000298746 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
TRUB1-201ENST00000298746 RPAP2Q8IXW5 612 aaPredicted RBP13.8□□□□□ -0.2
TRUB1-201ENST00000298746 MEIS3Q99687 375 aa13.8□□□□□ -0.2
TRUB1-201ENST00000298746 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms