RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SULT6B1Q6IMI4 303 aa33.38■■■□□ 2.93
SDCCAG3-201ENST00000298537 FANCIQ9NVI1 1328 aa33.38■■■□□ 2.93
SDCCAG3-201ENST00000298537 FOXO3O43524 673 aa33.37■■■□□ 2.93
SDCCAG3-201ENST00000298537 PSME1Q06323 249 aa33.36■■■□□ 2.93
SDCCAG3-201ENST00000298537 NFE2L2Q16236 605 aa33.36■■■□□ 2.93
SDCCAG3-201ENST00000298537 BCL2L13Q9BXK5 485 aa33.35■■■□□ 2.93
SDCCAG3-201ENST00000298537 MYH16Q9H6N6 1097 aa33.35■■■□□ 2.93
SDCCAG3-201ENST00000298537 PLEKHG5O94827 1062 aa33.34■■■□□ 2.93
SDCCAG3-201ENST00000298537 TMEM94Q12767 1356 aa33.33■■■□□ 2.93
SDCCAG3-201ENST00000298537 NEFMP07197 916 aa33.33■■■□□ 2.93
SDCCAG3-201ENST00000298537 AMPHP49418 695 aa33.33■■■□□ 2.93
SDCCAG3-201ENST00000298537 RARSP54136 660 aaKnown RBP33.32■■■□□ 2.92
SDCCAG3-201ENST00000298537 SBNO1A3KN83 1393 aa33.32■■■□□ 2.92
SDCCAG3-201ENST00000298537 FLT4P35916 1363 aa33.31■■■□□ 2.92
SDCCAG3-201ENST00000298537 FAM83GA6ND36 823 aa33.3■■■□□ 2.92
SDCCAG3-201ENST00000298537 EXOSC9Q06265 439 aaKnown RBP33.3■■■□□ 2.92
SDCCAG3-201ENST00000298537 C19orf44Q9H6X5 657 aa33.3■■■□□ 2.92
SDCCAG3-201ENST00000298537 LMTK3Q96Q04 1460 aa33.3■■■□□ 2.92
SDCCAG3-201ENST00000298537 DCTN1Q14203 1278 aa33.27■■■□□ 2.92
SDCCAG3-201ENST00000298537 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.27■■■□□ 2.92
SDCCAG3-201ENST00000298537 TNNQ9UQP3 1299 aa33.27■■■□□ 2.92
SDCCAG3-201ENST00000298537 LAS1LQ9Y4W2 734 aaKnown RBP33.27■■■□□ 2.92
SDCCAG3-201ENST00000298537 C1orf167Q5SNV9 1468 aa33.27■■■□□ 2.92
SDCCAG3-201ENST00000298537 RGPD1P0DJD0 1748 aa33.27■■■□□ 2.92
SDCCAG3-201ENST00000298537 FRAT1Q92837 279 aaPredicted RBP33.26■■■□□ 2.91
SDCCAG3-201ENST00000298537 HOXC9P31274 260 aa33.25■■■□□ 2.91
SDCCAG3-201ENST00000298537 DDX17Q92841 729 aaKnown RBP33.25■■■□□ 2.91
SDCCAG3-201ENST00000298537 IL16Q14005 1332 aa33.24■■■□□ 2.91
SDCCAG3-201ENST00000298537 DLG5Q8TDM6 1919 aa33.23■■■□□ 2.91
SDCCAG3-201ENST00000298537 EYA1Q99502 592 aa33.23■■■□□ 2.91
SDCCAG3-201ENST00000298537 USP54Q70EL1 1684 aa33.23■■■□□ 2.91
SDCCAG3-201ENST00000298537 LTV1Q96GA3 475 aaPredicted RBP33.23■■■□□ 2.91
SDCCAG3-201ENST00000298537 LMOD2Q6P5Q4 547 aa33.21■■■□□ 2.91
SDCCAG3-201ENST00000298537 PANK1Q8TE04 598 aa33.21■■■□□ 2.91
SDCCAG3-201ENST00000298537 ZBTB7CA1YPR0 619 aa33.19■■■□□ 2.9
SDCCAG3-201ENST00000298537 STRCQ7RTU9 1775 aa33.19■■■□□ 2.9
SDCCAG3-201ENST00000298537 CANXP27824 592 aaKnown RBP33.18■■■□□ 2.9
SDCCAG3-201ENST00000298537 MYT1Q01538 1121 aa33.18■■■□□ 2.9
SDCCAG3-201ENST00000298537 MST1RQ04912 1400 aa33.18■■■□□ 2.9
SDCCAG3-201ENST00000298537 ATF3P18847 181 aa33.18■■■□□ 2.9
SDCCAG3-201ENST00000298537 KRT28Q7Z3Y7 464 aa33.17■■■□□ 2.9
SDCCAG3-201ENST00000298537 ARHGEF10O15013 1369 aa33.16■■■□□ 2.9
SDCCAG3-201ENST00000298537 NFAT5O94916 1531 aa33.16■■■□□ 2.9
SDCCAG3-201ENST00000298537 IGSF1Q8N6C5 1336 aa33.16■■■□□ 2.9
SDCCAG3-201ENST00000298537 RLBP1P12271 317 aa33.14■■■□□ 2.9
SDCCAG3-201ENST00000298537 COG6Q9Y2V7 657 aa33.14■■■□□ 2.9
SDCCAG3-201ENST00000298537 MCM10Q7L590 875 aa33.13■■■□□ 2.89
SDCCAG3-201ENST00000298537 SSH1Q8WYL5 1049 aa33.13■■■□□ 2.89
SDCCAG3-201ENST00000298537 LTN1O94822 1766 aa33.12■■■□□ 2.89
SDCCAG3-201ENST00000298537 USHBP1Q8N6Y0 703 aa33.12■■■□□ 2.89
SDCCAG3-201ENST00000298537 MBIPQ9NS73 344 aa33.12■■■□□ 2.89
SDCCAG3-201ENST00000298537 CLUAP1Q96AJ1 413 aa33.12■■■□□ 2.89
SDCCAG3-201ENST00000298537 MTHFSDQ2M296 383 aaKnown RBP33.11■■■□□ 2.89
SDCCAG3-201ENST00000298537 SKAP1Q86WV1 359 aa33.11■■■□□ 2.89
SDCCAG3-201ENST00000298537 KDRP35968 1356 aa33.11■■■□□ 2.89
SDCCAG3-201ENST00000298537 ZNF335Q9H4Z2 1342 aaPredicted RBP33.11■■■□□ 2.89
SDCCAG3-201ENST00000298537 ZNF853P0CG23 659 aa33.11■■■□□ 2.89
SDCCAG3-201ENST00000298537 TSPYL6Q8N831 410 aa33.1■■■□□ 2.89
SDCCAG3-201ENST00000298537 TRPM3Q9HCF6 1732 aaPredicted RBP33.1■■■□□ 2.89
SDCCAG3-201ENST00000298537 SMC4Q9NTJ3 1288 aa33.09■■■□□ 2.89
SDCCAG3-201ENST00000298537 GCP02774 474 aa33.08■■■□□ 2.89
SDCCAG3-201ENST00000298537 PDE3AQ14432 1141 aa33.08■■■□□ 2.89
SDCCAG3-201ENST00000298537 ELL2O00472 640 aaPredicted RBP33.08■■■□□ 2.89
SDCCAG3-201ENST00000298537 IFT57Q9NWB7 429 aa33.08■■■□□ 2.89
SDCCAG3-201ENST00000298537 KIF24Q5T7B8 1368 aa33.07■■■□□ 2.88
SDCCAG3-201ENST00000298537 LMOD3Q0VAK6 560 aa33.07■■■□□ 2.88
SDCCAG3-201ENST00000298537 IP6K1Q92551 441 aa33.07■■■□□ 2.88
SDCCAG3-201ENST00000298537 CT47B1P0C2W7 299 aaPredicted RBP33.06■■■□□ 2.88
SDCCAG3-201ENST00000298537 GNAI1P63096 354 aa33.06■■■□□ 2.88
SDCCAG3-201ENST00000298537 XIRP1Q702N8 1843 aaKnown RBP33.06■■■□□ 2.88
SDCCAG3-201ENST00000298537 CFAP44Q96MT7 982 aa33.05■■■□□ 2.88
SDCCAG3-201ENST00000298537 KCNH5Q8NCM2 988 aa33.04■■■□□ 2.88
SDCCAG3-201ENST00000298537 KIF1AQ12756 1690 aa33.04■■■□□ 2.88
SDCCAG3-201ENST00000298537 DCCP43146 1447 aa33.03■■■□□ 2.88
SDCCAG3-201ENST00000298537 CADPS2Q86UW7 1296 aa33.03■■■□□ 2.88
SDCCAG3-201ENST00000298537 CALD1Q05682 793 aaKnown RBP33.02■■■□□ 2.88
SDCCAG3-201ENST00000298537 RTL1A6NKG5 1358 aa33.02■■■□□ 2.88
SDCCAG3-201ENST00000298537 NCOA3Q9Y6Q9 1424 aa33.02■■■□□ 2.88
SDCCAG3-201ENST00000298537 NBPF6Q5VWK0 638 aa33.01■■■□□ 2.88
SDCCAG3-201ENST00000298537 C8orf58Q8NAV2 365 aa33.01■■■□□ 2.88
SDCCAG3-201ENST00000298537 LRRC59Q96AG4 307 aaKnown RBP33.01■■■□□ 2.88
SDCCAG3-201ENST00000298537 NBPF4Q96M43 638 aa33.01■■■□□ 2.88
SDCCAG3-201ENST00000298537 MSH6P52701 1360 aa33.01■■■□□ 2.88
SDCCAG3-201ENST00000298537 TCERG1O14776 1098 aaKnown RBP33.01■■■□□ 2.87
SDCCAG3-201ENST00000298537 ARHGEF25Q86VW2 580 aa33.01■■■□□ 2.87
SDCCAG3-201ENST00000298537 RBM19Q9Y4C8 960 aaKnown RBP33.01■■■□□ 2.87
SDCCAG3-201ENST00000298537 SLIT3O75094 1523 aa33■■■□□ 2.87
SDCCAG3-201ENST00000298537 VAMP4O75379 141 aa33■■■□□ 2.87
SDCCAG3-201ENST00000298537 USP19O94966 1318 aa33■■■□□ 2.87
SDCCAG3-201ENST00000298537 KRT24Q2M2I5 525 aa33■■■□□ 2.87
SDCCAG3-201ENST00000298537 NOB1Q9ULX3 412 aaKnown RBP33■■■□□ 2.87
SDCCAG3-201ENST00000298537 KDM2BQ8NHM5 1336 aa32.99■■■□□ 2.87
SDCCAG3-201ENST00000298537 ZKSCAN2Q63HK3 967 aa32.98■■■□□ 2.87
SDCCAG3-201ENST00000298537 MIS18AQ9NYP9 233 aa32.98■■■□□ 2.87
SDCCAG3-201ENST00000298537 TRIM27P14373 513 aa32.97■■■□□ 2.87
SDCCAG3-201ENST00000298537 AXIN2Q9Y2T1 843 aa32.97■■■□□ 2.87
SDCCAG3-201ENST00000298537 ZC3H6P61129 1189 aaKnown RBP32.96■■■□□ 2.87
SDCCAG3-201ENST00000298537 CABLES1Q8TDN4 633 aa32.96■■■□□ 2.87
SDCCAG3-201ENST00000298537 MED1Q15648 1581 aaPredicted RBP32.94■■■□□ 2.86
SDCCAG3-201ENST00000298537 ALS2Q96Q42 1657 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms