RNA–Protein interactions for RNA: ENST00000297598.4

PDP1-201, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDP1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP1-201ENST00000297598 POLR3AO14802 1390 aaPredicted RBP18.59■□□□□ 0.57
PDP1-201ENST00000297598 DTNBO60941 627 aa18.59■□□□□ 0.57
PDP1-201ENST00000297598 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
PDP1-201ENST00000297598 ZNF830Q96NB3 372 aaPredicted RBP18.59■□□□□ 0.57
PDP1-201ENST00000297598 USP19O94966 1318 aa18.59■□□□□ 0.57
PDP1-201ENST00000297598 H3BQV1 296 aa18.59■□□□□ 0.57
PDP1-201ENST00000297598 PRIM1P49642 420 aaKnown RBP18.59■□□□□ 0.57
PDP1-201ENST00000297598 ZSCAN23Q3MJ62 389 aa18.59■□□□□ 0.57
PDP1-201ENST00000297598 IFFO2Q5TF58 517 aa18.59■□□□□ 0.57
PDP1-201ENST00000297598 GPATCH3Q96I76 525 aa18.59■□□□□ 0.57
PDP1-201ENST00000297598 KLHL40Q2TBA0 621 aa18.58■□□□□ 0.57
PDP1-201ENST00000297598 ATAD2Q6PL18 1390 aa18.58■□□□□ 0.57
PDP1-201ENST00000297598 ZKSCAN1P17029 563 aaPredicted RBP18.58■□□□□ 0.57
PDP1-201ENST00000297598 GAS2L3Q86XJ1 694 aa18.58■□□□□ 0.57
PDP1-201ENST00000297598 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.56
PDP1-201ENST00000297598 CHAMP1Q96JM3 812 aa18.58■□□□□ 0.56
PDP1-201ENST00000297598 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
PDP1-201ENST00000297598 OTUD7AQ8TE49 926 aaPredicted RBP18.57■□□□□ 0.56
PDP1-201ENST00000297598 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
PDP1-201ENST00000297598 KIAA0556O60303 1618 aa18.57■□□□□ 0.56
PDP1-201ENST00000297598 SDSP20132 328 aa18.57■□□□□ 0.56
PDP1-201ENST00000297598 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
PDP1-201ENST00000297598 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
PDP1-201ENST00000297598 BECN2A8MW95 431 aa18.57■□□□□ 0.56
PDP1-201ENST00000297598 NRDCO43847 1150 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
PDP1-201ENST00000297598 FERMT3Q86UX7 667 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 RPAP2Q8IXW5 612 aaPredicted RBP18.56■□□□□ 0.56
PDP1-201ENST00000297598 USP25Q9UHP3 1055 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 CEBPZQ03701 1054 aaKnown RBP18.56■□□□□ 0.56
PDP1-201ENST00000297598 GOLGA6L19H0YKK7 550 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 NPHP1O15259 732 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 TEFQ10587 303 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 MEIS3Q99687 375 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 TRAPPC8Q9Y2L5 1435 aa18.56■□□□□ 0.56
PDP1-201ENST00000297598 CWC27Q6UX04 472 aaKnown RBP18.55■□□□□ 0.56
PDP1-201ENST00000297598 CYB5RLQ6IPT4 315 aa18.55■□□□□ 0.56
PDP1-201ENST00000297598 ANTXR1Q9H6X2 564 aa18.55■□□□□ 0.56
PDP1-201ENST00000297598 FAM184AQ8NB25 1140 aa18.55■□□□□ 0.56
PDP1-201ENST00000297598 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
PDP1-201ENST00000297598 GNAI3P08754 354 aa18.54■□□□□ 0.56
PDP1-201ENST00000297598 STK3Q13188 491 aa18.54■□□□□ 0.56
PDP1-201ENST00000297598 SNX21Q969T3 373 aa18.53■□□□□ 0.56
PDP1-201ENST00000297598 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
PDP1-201ENST00000297598 ZNF771Q7L3S4 317 aaPredicted RBP18.53■□□□□ 0.56
PDP1-201ENST00000297598 ADGRL2O95490 1459 aa18.53■□□□□ 0.56
PDP1-201ENST00000297598 SF3A1Q15459 793 aaKnown RBP18.53■□□□□ 0.56
PDP1-201ENST00000297598 TTC22Q5TAA0 569 aa18.53■□□□□ 0.56
PDP1-201ENST00000297598 TRIM5Q9C035 493 aa18.53■□□□□ 0.56
PDP1-201ENST00000297598 VAMP4O75379 141 aa18.52■□□□□ 0.56
PDP1-201ENST00000297598 NLRP6P59044 892 aa18.52■□□□□ 0.56
PDP1-201ENST00000297598 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
PDP1-201ENST00000297598 RUFY2Q8WXA3 655 aa18.52■□□□□ 0.56
PDP1-201ENST00000297598 CD2BP2O95400 341 aaKnown RBP18.52■□□□□ 0.55
PDP1-201ENST00000297598 MCM2P49736 904 aa18.51■□□□□ 0.55
PDP1-201ENST00000297598 CAMK4Q16566 473 aa18.51■□□□□ 0.55
PDP1-201ENST00000297598 PDCL3Q9H2J4 239 aa18.51■□□□□ 0.55
PDP1-201ENST00000297598 NUP160Q12769 1436 aa18.5■□□□□ 0.55
PDP1-201ENST00000297598 ZBTB7BO15156 539 aaPredicted RBP18.5■□□□□ 0.55
PDP1-201ENST00000297598 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
PDP1-201ENST00000297598 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
PDP1-201ENST00000297598 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
PDP1-201ENST00000297598 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
PDP1-201ENST00000297598 MAP7D2Q96T17 732 aa18.5■□□□□ 0.55
PDP1-201ENST00000297598 SRGAP3O43295 1099 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 HDGFL1Q5TGJ6 251 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 TMX3Q96JJ7 454 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.49■□□□□ 0.55
PDP1-201ENST00000297598 CBX1P83916 185 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 PKP1Q13835 747 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 AEBP1Q8IUX7 1158 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 ABCC11Q96J66 1382 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 MX1P20591 662 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 PLEKHM2Q8IWE5 1019 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 RBSNQ9H1K0 784 aa18.49■□□□□ 0.55
PDP1-201ENST00000297598 RBM25P49756 843 aaKnown RBP18.48■□□□□ 0.55
PDP1-201ENST00000297598 SASS6Q6UVJ0 657 aa18.48■□□□□ 0.55
PDP1-201ENST00000297598 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
PDP1-201ENST00000297598 CNTROBQ8N137 903 aa18.48■□□□□ 0.55
PDP1-201ENST00000297598 MBD5Q9P267 1494 aa18.48■□□□□ 0.55
PDP1-201ENST00000297598 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
PDP1-201ENST00000297598 SIL1Q9H173 461 aa18.48■□□□□ 0.55
PDP1-201ENST00000297598 CCDC83Q8IWF9 413 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 RTEL1-TNFRSF6BF6WH68 1400 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
PDP1-201ENST00000297598 GORABQ5T7V8 394 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 FMNL2Q96PY5 1086 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 KDM4AO75164 1064 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
PDP1-201ENST00000297598 POLKQ9UBT6 870 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 ABCA5Q8WWZ7 1642 aa18.47■□□□□ 0.55
PDP1-201ENST00000297598 G3BP1Q13283 466 aaKnown RBP eCLIP18.46■□□□□ 0.55
PDP1-201ENST00000297598 SLC52A1Q9NWF4 448 aa18.46■□□□□ 0.55
PDP1-201ENST00000297598 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
PDP1-201ENST00000297598 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
PDP1-201ENST00000297598 ZHX1Q9UKY1 873 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms