RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 SEC24BO95487 1268 aa11.85□□□□□ -0.51
UBLCP1-201ENST00000296786 NALCNQ8IZF0 1738 aa11.85□□□□□ -0.51
UBLCP1-201ENST00000296786 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
UBLCP1-201ENST00000296786 RGPD8O14715 1765 aaPredicted RBP11.85□□□□□ -0.51
UBLCP1-201ENST00000296786 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
UBLCP1-201ENST00000296786 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
UBLCP1-201ENST00000296786 USP35Q9P2H5 1018 aa11.84□□□□□ -0.51
UBLCP1-201ENST00000296786 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
UBLCP1-201ENST00000296786 IPO8O15397 1037 aaKnown RBP11.83□□□□□ -0.52
UBLCP1-201ENST00000296786 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
UBLCP1-201ENST00000296786 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
UBLCP1-201ENST00000296786 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
UBLCP1-201ENST00000296786 LTKP29376 864 aa11.82□□□□□ -0.52
UBLCP1-201ENST00000296786 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
UBLCP1-201ENST00000296786 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
UBLCP1-201ENST00000296786 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
UBLCP1-201ENST00000296786 CALD1Q05682 793 aaKnown RBP11.82□□□□□ -0.52
UBLCP1-201ENST00000296786 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
UBLCP1-201ENST00000296786 PEAK1Q9H792 1746 aa11.81□□□□□ -0.52
UBLCP1-201ENST00000296786 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
UBLCP1-201ENST00000296786 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
UBLCP1-201ENST00000296786 GNAI1P63096 354 aa11.81□□□□□ -0.52
UBLCP1-201ENST00000296786 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
UBLCP1-201ENST00000296786 RGPD1P0DJD0 1748 aa11.8□□□□□ -0.52
UBLCP1-201ENST00000296786 VAMP4O75379 141 aa11.8□□□□□ -0.52
UBLCP1-201ENST00000296786 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
UBLCP1-201ENST00000296786 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
UBLCP1-201ENST00000296786 ACEP12821 1306 aa11.8□□□□□ -0.52
UBLCP1-201ENST00000296786 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 ZNF853P0CG23 659 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 BCL11AQ9H165 835 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 OVOS2A0A0J9YW53 1432 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 OVOS2Q6IE36 1432 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 PTPRUQ92729 1446 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 USP6P35125 1406 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 PTCH1Q13635 1447 aa11.79□□□□□ -0.52
UBLCP1-201ENST00000296786 FAM83GA6ND36 823 aa11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 NFKBIBQ15653 356 aa11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 ELL2O00472 640 aaPredicted RBP11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 SLC26A8Q96RN1 970 aa11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 UPF2Q9HAU5 1272 aaKnown RBP11.78□□□□□ -0.52
UBLCP1-201ENST00000296786 SLIT1O75093 1534 aa11.77□□□□□ -0.52
UBLCP1-201ENST00000296786 RIMS1Q86UR5 1692 aaKnown RBP11.77□□□□□ -0.53
UBLCP1-201ENST00000296786 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
UBLCP1-201ENST00000296786 EIF4A2Q14240 407 aaKnown RBP11.77□□□□□ -0.53
UBLCP1-201ENST00000296786 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
UBLCP1-201ENST00000296786 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.53
UBLCP1-201ENST00000296786 PIK3R4Q99570 1358 aa11.76□□□□□ -0.53
UBLCP1-201ENST00000296786 DCTN1Q14203 1278 aa11.76□□□□□ -0.53
UBLCP1-201ENST00000296786 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
UBLCP1-201ENST00000296786 ARHGAP45Q92619 1136 aa11.76□□□□□ -0.53
UBLCP1-201ENST00000296786 ARHGAP23Q9P227 1491 aa11.76□□□□□ -0.53
UBLCP1-201ENST00000296786 EID1Q9Y6B2 187 aa11.76□□□□□ -0.53
UBLCP1-201ENST00000296786 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
UBLCP1-201ENST00000296786 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
UBLCP1-201ENST00000296786 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
UBLCP1-201ENST00000296786 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
UBLCP1-201ENST00000296786 BECN1Q14457 450 aa11.75□□□□□ -0.53
UBLCP1-201ENST00000296786 SSH2Q76I76 1423 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 ABCC4O15439 1325 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 AMOTL2Q9Y2J4 779 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 USP31Q70CQ4 1352 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 XRN1Q8IZH2 1706 aaKnown RBP11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 NUCB1Q02818 461 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 PLPPR3Q6T4P5 718 aa11.74□□□□□ -0.53
UBLCP1-201ENST00000296786 SOX12O15370 315 aa11.72□□□□□ -0.53
UBLCP1-201ENST00000296786 LNPKQ9C0E8 428 aa11.72□□□□□ -0.53
UBLCP1-201ENST00000296786 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
UBLCP1-201ENST00000296786 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
UBLCP1-201ENST00000296786 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
UBLCP1-201ENST00000296786 CHD1LQ86WJ1 897 aa11.71□□□□□ -0.53
UBLCP1-201ENST00000296786 TBX22Q9Y458 520 aa11.71□□□□□ -0.53
UBLCP1-201ENST00000296786 FRAT2O75474 233 aaPredicted RBP11.71□□□□□ -0.54
UBLCP1-201ENST00000296786 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.54
UBLCP1-201ENST00000296786 TTC21AQ8NDW8 1320 aa11.71□□□□□ -0.54
UBLCP1-201ENST00000296786 MCM10Q7L590 875 aa11.7□□□□□ -0.54
UBLCP1-201ENST00000296786 API5Q9BZZ5 524 aaKnown RBP11.7□□□□□ -0.54
UBLCP1-201ENST00000296786 GCC1Q96CN9 775 aa11.7□□□□□ -0.54
UBLCP1-201ENST00000296786 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
UBLCP1-201ENST00000296786 SLKQ9H2G2 1235 aaPredicted RBP11.7□□□□□ -0.54
UBLCP1-201ENST00000296786 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
UBLCP1-201ENST00000296786 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 ARHGEF10O15013 1369 aa11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 CHL1O00533 1208 aa11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 SIRT2Q8IXJ6 389 aa11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
UBLCP1-201ENST00000296786 SBNO1A3KN83 1393 aa11.68□□□□□ -0.54
UBLCP1-201ENST00000296786 FLT4P35916 1363 aa11.68□□□□□ -0.54
UBLCP1-201ENST00000296786 USP54Q70EL1 1684 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms