RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 PANK1Q8TE04 598 aa23.48■■□□□ 1.35
GABRB1-201ENST00000295454 FRAT1Q92837 279 aaPredicted RBP23.48■■□□□ 1.35
GABRB1-201ENST00000295454 SKAP1Q86WV1 359 aa23.48■■□□□ 1.35
GABRB1-201ENST00000295454 IL16Q14005 1332 aa23.48■■□□□ 1.35
GABRB1-201ENST00000295454 CANXP27824 592 aaKnown RBP23.46■■□□□ 1.35
GABRB1-201ENST00000295454 NEFMP07197 916 aa23.45■■□□□ 1.35
GABRB1-201ENST00000295454 PHF8Q9UPP1 1060 aa23.45■■□□□ 1.34
GABRB1-201ENST00000295454 KDM2BQ8NHM5 1336 aa23.44■■□□□ 1.34
GABRB1-201ENST00000295454 NLRP6P59044 892 aa23.44■■□□□ 1.34
GABRB1-201ENST00000295454 SULT6B1Q6IMI4 303 aa23.44■■□□□ 1.34
GABRB1-201ENST00000295454 COG6Q9Y2V7 657 aa23.43■■□□□ 1.34
GABRB1-201ENST00000295454 RLBP1P12271 317 aa23.42■■□□□ 1.34
GABRB1-201ENST00000295454 PDE3AQ14432 1141 aa23.42■■□□□ 1.34
GABRB1-201ENST00000295454 PAK3O75914 559 aaPredicted RBP23.42■■□□□ 1.34
GABRB1-201ENST00000295454 SBNO1A3KN83 1393 aa23.42■■□□□ 1.34
GABRB1-201ENST00000295454 FAM83GA6ND36 823 aa23.41■■□□□ 1.34
GABRB1-201ENST00000295454 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
GABRB1-201ENST00000295454 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
GABRB1-201ENST00000295454 FLT4P35916 1363 aa23.4■■□□□ 1.34
GABRB1-201ENST00000295454 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
GABRB1-201ENST00000295454 LTN1O94822 1766 aa23.39■■□□□ 1.34
GABRB1-201ENST00000295454 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
GABRB1-201ENST00000295454 ABTB2Q8N961 1025 aa23.39■■□□□ 1.33
GABRB1-201ENST00000295454 DCTN1Q14203 1278 aa23.38■■□□□ 1.33
GABRB1-201ENST00000295454 SSH1Q8WYL5 1049 aa23.38■■□□□ 1.33
GABRB1-201ENST00000295454 CLUAP1Q96AJ1 413 aa23.38■■□□□ 1.33
GABRB1-201ENST00000295454 CT47B1P0C2W7 299 aaPredicted RBP23.36■■□□□ 1.33
GABRB1-201ENST00000295454 AMPHP49418 695 aa23.36■■□□□ 1.33
GABRB1-201ENST00000295454 ORAI2Q96SN7 254 aa23.36■■□□□ 1.33
GABRB1-201ENST00000295454 SMC4Q9NTJ3 1288 aa23.36■■□□□ 1.33
GABRB1-201ENST00000295454 ARHGEF10O15013 1369 aa23.35■■□□□ 1.33
GABRB1-201ENST00000295454 ZNF853P0CG23 659 aa23.33■■□□□ 1.33
GABRB1-201ENST00000295454 PROSER2Q86WR7 435 aaPredicted RBP23.33■■□□□ 1.33
GABRB1-201ENST00000295454 CENPQQ7L2Z9 268 aaPredicted RBP23.33■■□□□ 1.32
GABRB1-201ENST00000295454 MBIPQ9NS73 344 aa23.33■■□□□ 1.32
GABRB1-201ENST00000295454 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
GABRB1-201ENST00000295454 NFAT5O94916 1531 aa23.32■■□□□ 1.32
GABRB1-201ENST00000295454 HOXC9P31274 260 aa23.32■■□□□ 1.32
GABRB1-201ENST00000295454 EYA1Q99502 592 aa23.32■■□□□ 1.32
GABRB1-201ENST00000295454 IFT57Q9NWB7 429 aa23.32■■□□□ 1.32
GABRB1-201ENST00000295454 ZKSCAN2Q63HK3 967 aa23.31■■□□□ 1.32
GABRB1-201ENST00000295454 TSPYL6Q8N831 410 aa23.31■■□□□ 1.32
GABRB1-201ENST00000295454 IGHDP01880 384 aa23.3■■□□□ 1.32
GABRB1-201ENST00000295454 HSPA2P54652 639 aa23.3■■□□□ 1.32
GABRB1-201ENST00000295454 PSME1Q06323 249 aa23.3■■□□□ 1.32
GABRB1-201ENST00000295454 IGSF1Q8N6C5 1336 aa23.3■■□□□ 1.32
GABRB1-201ENST00000295454 LMOD3Q0VAK6 560 aa23.3■■□□□ 1.32
GABRB1-201ENST00000295454 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
GABRB1-201ENST00000295454 GNAI1P63096 354 aa23.29■■□□□ 1.32
GABRB1-201ENST00000295454 KDRP35968 1356 aa23.29■■□□□ 1.32
GABRB1-201ENST00000295454 TCERG1O14776 1098 aaKnown RBP23.29■■□□□ 1.32
GABRB1-201ENST00000295454 TRIM27P14373 513 aa23.29■■□□□ 1.32
GABRB1-201ENST00000295454 CALD1Q05682 793 aaKnown RBP23.29■■□□□ 1.32
GABRB1-201ENST00000295454 MCM10Q7L590 875 aa23.29■■□□□ 1.32
GABRB1-201ENST00000295454 NOB1Q9ULX3 412 aaKnown RBP23.29■■□□□ 1.32
GABRB1-201ENST00000295454 FOXO3O43524 673 aa23.28■■□□□ 1.32
GABRB1-201ENST00000295454 DZIP1LQ8IYY4 767 aaKnown RBP23.27■■□□□ 1.32
GABRB1-201ENST00000295454 LTV1Q96GA3 475 aaPredicted RBP23.27■■□□□ 1.32
GABRB1-201ENST00000295454 ELL2O00472 640 aaPredicted RBP23.26■■□□□ 1.31
GABRB1-201ENST00000295454 CFAP44Q96MT7 982 aa23.26■■□□□ 1.31
GABRB1-201ENST00000295454 C1orf167Q5SNV9 1468 aa23.26■■□□□ 1.31
GABRB1-201ENST00000295454 VAMP4O75379 141 aa23.26■■□□□ 1.31
GABRB1-201ENST00000295454 RGPD2P0DJD1 1756 aa23.26■■□□□ 1.31
GABRB1-201ENST00000295454 MTHFSDQ2M296 383 aaKnown RBP23.26■■□□□ 1.31
GABRB1-201ENST00000295454 PLEKHG5O94827 1062 aa23.25■■□□□ 1.31
GABRB1-201ENST00000295454 MVPQ14764 893 aaKnown RBP23.25■■□□□ 1.31
GABRB1-201ENST00000295454 PCDHB15Q9Y5E8 787 aa23.25■■□□□ 1.31
GABRB1-201ENST00000295454 KIF24Q5T7B8 1368 aa23.24■■□□□ 1.31
GABRB1-201ENST00000295454 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
GABRB1-201ENST00000295454 KIF1AQ12756 1690 aa23.24■■□□□ 1.31
GABRB1-201ENST00000295454 ATF7IPQ6VMQ6 1270 aa23.24■■□□□ 1.31
GABRB1-201ENST00000295454 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
GABRB1-201ENST00000295454 TMEM94Q12767 1356 aa23.23■■□□□ 1.31
GABRB1-201ENST00000295454 ALDH1L2Q3SY69 923 aa23.23■■□□□ 1.31
GABRB1-201ENST00000295454 RTL1A6NKG5 1358 aa23.22■■□□□ 1.31
GABRB1-201ENST00000295454 CRB1P82279 1406 aa23.21■■□□□ 1.31
GABRB1-201ENST00000295454 ZBTB7CA1YPR0 619 aa23.21■■□□□ 1.31
GABRB1-201ENST00000295454 KRT24Q2M2I5 525 aa23.21■■□□□ 1.31
GABRB1-201ENST00000295454 USHBP1Q8N6Y0 703 aa23.21■■□□□ 1.31
GABRB1-201ENST00000295454 C19orf44Q9H6X5 657 aa23.21■■□□□ 1.31
GABRB1-201ENST00000295454 SLIT3O75094 1523 aa23.21■■□□□ 1.31
GABRB1-201ENST00000295454 TWISTNBQ3B726 338 aaPredicted RBP23.2■■□□□ 1.3
GABRB1-201ENST00000295454 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
GABRB1-201ENST00000295454 XIRP1Q702N8 1843 aaKnown RBP23.2■■□□□ 1.3
GABRB1-201ENST00000295454 PHRF1Q9P1Y6 1649 aaKnown RBP23.2■■□□□ 1.3
GABRB1-201ENST00000295454 KIF16BQ96L93 1317 aa23.2■■□□□ 1.3
GABRB1-201ENST00000295454 MST1RQ04912 1400 aa23.2■■□□□ 1.3
GABRB1-201ENST00000295454 MS4A1P11836 297 aa23.2■■□□□ 1.3
GABRB1-201ENST00000295454 TMEM57Q8N5G2 664 aa23.2■■□□□ 1.3
GABRB1-201ENST00000295454 MSH5O43196 834 aa23.19■■□□□ 1.3
GABRB1-201ENST00000295454 PDE4AP27815 886 aa23.19■■□□□ 1.3
GABRB1-201ENST00000295454 STRCQ7RTU9 1775 aa23.18■■□□□ 1.3
GABRB1-201ENST00000295454 LRRC37A3O60309 1634 aa23.18■■□□□ 1.3
GABRB1-201ENST00000295454 ITPRIPQ8IWB1 547 aa23.18■■□□□ 1.3
GABRB1-201ENST00000295454 ALS2Q96Q42 1657 aa23.17■■□□□ 1.3
GABRB1-201ENST00000295454 KDM4FA0A1W2PPD8 638 aa23.17■■□□□ 1.3
GABRB1-201ENST00000295454 IP6K1Q92551 441 aa23.17■■□□□ 1.3
GABRB1-201ENST00000295454 CHL1O00533 1208 aa23.17■■□□□ 1.3
GABRB1-201ENST00000295454 RGS3P49796 1198 aa23.17■■□□□ 1.3
GABRB1-201ENST00000295454 LMOD2Q6P5Q4 547 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms