RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 PHACTR3Q96KR7 559 aa27.82■■■□□ 2.04
SNRNP25-201ENST00000293861 KIF24Q5T7B8 1368 aa27.82■■■□□ 2.04
SNRNP25-201ENST00000293861 ESCO1Q5FWF5 840 aa27.8■■■□□ 2.04
SNRNP25-201ENST00000293861 ABTB2Q8N961 1025 aa27.79■■■□□ 2.04
SNRNP25-201ENST00000293861 NCOA3Q9Y6Q9 1424 aa27.79■■■□□ 2.04
SNRNP25-201ENST00000293861 HSP90AB2PQ58FF8 381 aa27.79■■■□□ 2.04
SNRNP25-201ENST00000293861 TSR2Q969E8 191 aaKnown RBP27.79■■■□□ 2.04
SNRNP25-201ENST00000293861 CALD1Q05682 793 aaKnown RBP27.78■■■□□ 2.04
SNRNP25-201ENST00000293861 PAK3O75914 559 aaPredicted RBP27.77■■■□□ 2.04
SNRNP25-201ENST00000293861 SOX12O15370 315 aa27.77■■■□□ 2.04
SNRNP25-201ENST00000293861 C19orf44Q9H6X5 657 aa27.77■■■□□ 2.04
SNRNP25-201ENST00000293861 ARHGEF10O15013 1369 aa27.76■■■□□ 2.03
SNRNP25-201ENST00000293861 EXOSC9Q06265 439 aaKnown RBP27.76■■■□□ 2.03
SNRNP25-201ENST00000293861 LMOD3Q0VAK6 560 aa27.76■■■□□ 2.03
SNRNP25-201ENST00000293861 KIF1AQ12756 1690 aa27.75■■■□□ 2.03
SNRNP25-201ENST00000293861 PSME1Q06323 249 aa27.75■■■□□ 2.03
SNRNP25-201ENST00000293861 KDM2BQ8NHM5 1336 aa27.75■■■□□ 2.03
SNRNP25-201ENST00000293861 CANXP27824 592 aaKnown RBP27.75■■■□□ 2.03
SNRNP25-201ENST00000293861 AMPHP49418 695 aa27.74■■■□□ 2.03
SNRNP25-201ENST00000293861 DCCP43146 1447 aa27.73■■■□□ 2.03
SNRNP25-201ENST00000293861 STRCP1A6NGW2 1772 aa27.73■■■□□ 2.03
SNRNP25-201ENST00000293861 SULT6B1Q6IMI4 303 aa27.73■■■□□ 2.03
SNRNP25-201ENST00000293861 C1orf167Q5SNV9 1468 aa27.72■■■□□ 2.03
SNRNP25-201ENST00000293861 KDM4FA0A1W2PPD8 638 aa27.72■■■□□ 2.03
SNRNP25-201ENST00000293861 AAMPQ13685 434 aa27.71■■■□□ 2.03
SNRNP25-201ENST00000293861 RTL1A6NKG5 1358 aa27.71■■■□□ 2.03
SNRNP25-201ENST00000293861 NUTM2GQ5VZR2 741 aa27.71■■■□□ 2.03
SNRNP25-201ENST00000293861 CENPQQ7L2Z9 268 aaPredicted RBP27.71■■■□□ 2.03
SNRNP25-201ENST00000293861 HSPA2P54652 639 aa27.7■■■□□ 2.02
SNRNP25-201ENST00000293861 FRAT1Q92837 279 aaPredicted RBP27.7■■■□□ 2.02
SNRNP25-201ENST00000293861 LMTK3Q96Q04 1460 aa27.7■■■□□ 2.02
SNRNP25-201ENST00000293861 ORAI2Q96SN7 254 aa27.7■■■□□ 2.02
SNRNP25-201ENST00000293861 TMEM94Q12767 1356 aa27.69■■■□□ 2.02
SNRNP25-201ENST00000293861 AEBP1Q8IUX7 1158 aa27.69■■■□□ 2.02
SNRNP25-201ENST00000293861 IFT57Q9NWB7 429 aa27.69■■■□□ 2.02
SNRNP25-201ENST00000293861 TCERG1O14776 1098 aaKnown RBP27.69■■■□□ 2.02
SNRNP25-201ENST00000293861 LTN1O94822 1766 aa27.68■■■□□ 2.02
SNRNP25-201ENST00000293861 ZNF853P0CG23 659 aa27.68■■■□□ 2.02
SNRNP25-201ENST00000293861 GNAI1P63096 354 aa27.68■■■□□ 2.02
SNRNP25-201ENST00000293861 ZNF428Q96B54 188 aa27.68■■■□□ 2.02
SNRNP25-201ENST00000293861 NFAT5O94916 1531 aa27.68■■■□□ 2.02
SNRNP25-201ENST00000293861 KDRP35968 1356 aa27.67■■■□□ 2.02
SNRNP25-201ENST00000293861 HOXC9P31274 260 aa27.67■■■□□ 2.02
SNRNP25-201ENST00000293861 PANK1Q8TE04 598 aa27.67■■■□□ 2.02
SNRNP25-201ENST00000293861 IGSF1Q8N6C5 1336 aa27.66■■■□□ 2.02
SNRNP25-201ENST00000293861 BCL2L13Q9BXK5 485 aa27.66■■■□□ 2.02
SNRNP25-201ENST00000293861 TRPM3Q9HCF6 1732 aaPredicted RBP27.65■■■□□ 2.02
SNRNP25-201ENST00000293861 MS4A1P11836 297 aa27.65■■■□□ 2.02
SNRNP25-201ENST00000293861 KCNH5Q8NCM2 988 aa27.65■■■□□ 2.02
SNRNP25-201ENST00000293861 ALDH1L2Q3SY69 923 aa27.65■■■□□ 2.02
SNRNP25-201ENST00000293861 ZKSCAN2Q63HK3 967 aa27.65■■■□□ 2.02
SNRNP25-201ENST00000293861 COG6Q9Y2V7 657 aa27.65■■■□□ 2.02
SNRNP25-201ENST00000293861 MST1RQ04912 1400 aa27.65■■■□□ 2.02
SNRNP25-201ENST00000293861 PHRF1Q9P1Y6 1649 aaKnown RBP27.64■■■□□ 2.02
SNRNP25-201ENST00000293861 FOXO3O43524 673 aa27.64■■■□□ 2.02
SNRNP25-201ENST00000293861 ATF3P18847 181 aa27.64■■■□□ 2.02
SNRNP25-201ENST00000293861 SSH1Q8WYL5 1049 aa27.63■■■□□ 2.01
SNRNP25-201ENST00000293861 SMC4Q9NTJ3 1288 aa27.63■■■□□ 2.01
SNRNP25-201ENST00000293861 CLUAP1Q96AJ1 413 aa27.63■■■□□ 2.01
SNRNP25-201ENST00000293861 CFAP44Q96MT7 982 aa27.63■■■□□ 2.01
SNRNP25-201ENST00000293861 STRCQ7RTU9 1775 aa27.62■■■□□ 2.01
SNRNP25-201ENST00000293861 SLIT3O75094 1523 aa27.62■■■□□ 2.01
SNRNP25-201ENST00000293861 RLBP1P12271 317 aa27.61■■■□□ 2.01
SNRNP25-201ENST00000293861 EYA1Q99502 592 aa27.61■■■□□ 2.01
SNRNP25-201ENST00000293861 THUMPD2Q9BTF0 503 aaKnown RBP27.61■■■□□ 2.01
SNRNP25-201ENST00000293861 BRPF1P55201 1214 aaPredicted RBP27.61■■■□□ 2.01
SNRNP25-201ENST00000293861 CADPS2Q86UW7 1296 aa27.59■■■□□ 2.01
SNRNP25-201ENST00000293861 KIF16BQ96L93 1317 aa27.58■■■□□ 2.01
SNRNP25-201ENST00000293861 KRT28Q7Z3Y7 464 aa27.58■■■□□ 2.01
SNRNP25-201ENST00000293861 IP6K1Q92551 441 aa27.58■■■□□ 2.01
SNRNP25-201ENST00000293861 MBIPQ9NS73 344 aa27.58■■■□□ 2.01
SNRNP25-201ENST00000293861 TNNQ9UQP3 1299 aa27.58■■■□□ 2.01
SNRNP25-201ENST00000293861 LAS1LQ9Y4W2 734 aaKnown RBP27.58■■■□□ 2.01
SNRNP25-201ENST00000293861 DZIP1LQ8IYY4 767 aaKnown RBP27.57■■■□□ 2
SNRNP25-201ENST00000293861 FAM83GA6ND36 823 aa27.56■■■□□ 2
SNRNP25-201ENST00000293861 USP19O94966 1318 aa27.56■■■□□ 2
SNRNP25-201ENST00000293861 MSH6P52701 1360 aa27.56■■■□□ 2
SNRNP25-201ENST00000293861 MVPQ14764 893 aaKnown RBP27.55■■■□□ 2
SNRNP25-201ENST00000293861 VAMP4O75379 141 aa27.55■■■□□ 2
SNRNP25-201ENST00000293861 ATF7IPQ6VMQ6 1270 aa27.55■■■□□ 2
SNRNP25-201ENST00000293861 XPCQ01831 940 aaPredicted RBP27.54■■■□□ 2
SNRNP25-201ENST00000293861 ALS2Q96Q42 1657 aa27.54■■■□□ 2
SNRNP25-201ENST00000293861 IPO8O15397 1037 aaKnown RBP27.53■■■□□ 2
SNRNP25-201ENST00000293861 TRIM27P14373 513 aa27.53■■■□□ 2
SNRNP25-201ENST00000293861 FTSJ3Q8IY81 847 aaKnown RBP27.53■■■□□ 2
SNRNP25-201ENST00000293861 XIRP1Q702N8 1843 aaKnown RBP27.52■■■□□ 2
SNRNP25-201ENST00000293861 GAS2L2Q8NHY3 880 aa27.52■■■□□ 2
SNRNP25-201ENST00000293861 NOB1Q9ULX3 412 aaKnown RBP27.52■■■□□ 2
SNRNP25-201ENST00000293861 GCP02774 474 aa27.51■■■□□ 2
SNRNP25-201ENST00000293861 DCTN1Q14203 1278 aa27.51■■■□□ 2
SNRNP25-201ENST00000293861 MTHFSDQ2M296 383 aaKnown RBP27.49■■□□□ 1.99
SNRNP25-201ENST00000293861 IGHDP01880 384 aa27.49■■□□□ 1.99
SNRNP25-201ENST00000293861 ARHGEF25Q86VW2 580 aa27.49■■□□□ 1.99
SNRNP25-201ENST00000293861 LRRC37A3O60309 1634 aa27.49■■□□□ 1.99
SNRNP25-201ENST00000293861 CRB1P82279 1406 aa27.49■■□□□ 1.99
SNRNP25-201ENST00000293861 CHL1O00533 1208 aa27.48■■□□□ 1.99
SNRNP25-201ENST00000293861 TSPYL6Q8N831 410 aa27.48■■□□□ 1.99
SNRNP25-201ENST00000293861 TWISTNBQ3B726 338 aaPredicted RBP27.47■■□□□ 1.99
SNRNP25-201ENST00000293861 ARHGAP45Q92619 1136 aa27.47■■□□□ 1.99
SNRNP25-201ENST00000293861 NPHP3Q7Z494 1330 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms