RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 USP54Q70EL1 1684 aa24.54■■□□□ 1.52
TFF3-201ENST00000291525 PSDA5PKW4 1024 aaPredicted RBP24.54■■□□□ 1.52
TFF3-201ENST00000291525 SOX12O15370 315 aa24.54■■□□□ 1.52
TFF3-201ENST00000291525 EZH2Q15910 746 aaKnown RBP24.54■■□□□ 1.52
TFF3-201ENST00000291525 TMC1Q8TDI8 760 aa24.54■■□□□ 1.52
TFF3-201ENST00000291525 NFAT5O94916 1531 aa24.54■■□□□ 1.52
TFF3-201ENST00000291525 RGPD5Q99666 1765 aa24.54■■□□□ 1.52
TFF3-201ENST00000291525 LRRC37A3O60309 1634 aa24.53■■□□□ 1.52
TFF3-201ENST00000291525 CDCA7Q9BWT1 371 aaPredicted RBP24.53■■□□□ 1.52
TFF3-201ENST00000291525 OVOS2A0A0G2JMS6 1433 aa24.52■■□□□ 1.52
TFF3-201ENST00000291525 OVOS2A0A0J9YW53 1432 aa24.52■■□□□ 1.52
TFF3-201ENST00000291525 OVOS2Q6IE36 1432 aa24.52■■□□□ 1.52
TFF3-201ENST00000291525 CSB-PGBD3P0DP91 1061 aa24.52■■□□□ 1.52
TFF3-201ENST00000291525 PUS7Q96PZ0 661 aaKnown RBP24.52■■□□□ 1.52
TFF3-201ENST00000291525 CAMKK2Q96RR4 588 aa24.52■■□□□ 1.52
TFF3-201ENST00000291525 SLC24A1O60721 1099 aa24.51■■□□□ 1.51
TFF3-201ENST00000291525 DDB1Q16531 1140 aa24.51■■□□□ 1.51
TFF3-201ENST00000291525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.51■■□□□ 1.51
TFF3-201ENST00000291525 TERF2IPQ9NYB0 399 aa24.51■■□□□ 1.51
TFF3-201ENST00000291525 AXIN2Q9Y2T1 843 aa24.51■■□□□ 1.51
TFF3-201ENST00000291525 USP31Q70CQ4 1352 aa24.51■■□□□ 1.51
TFF3-201ENST00000291525 RREB1Q92766 1687 aa24.5■■□□□ 1.51
TFF3-201ENST00000291525 EDC4Q6P2E9 1401 aaKnown RBP24.5■■□□□ 1.51
TFF3-201ENST00000291525 CD163L1Q9NR16 1453 aa24.5■■□□□ 1.51
TFF3-201ENST00000291525 R3HDM1Q15032 1099 aaKnown RBP24.48■■□□□ 1.51
TFF3-201ENST00000291525 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
TFF3-201ENST00000291525 NINLQ9Y2I6 1382 aa24.47■■□□□ 1.51
TFF3-201ENST00000291525 CARD10Q9BWT7 1032 aa24.47■■□□□ 1.51
TFF3-201ENST00000291525 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
TFF3-201ENST00000291525 SLC12A5Q9H2X9 1139 aa24.46■■□□□ 1.51
TFF3-201ENST00000291525 NUP188Q5SRE5 1749 aa24.46■■□□□ 1.51
TFF3-201ENST00000291525 SBF2Q86WG5 1849 aa24.45■■□□□ 1.5
TFF3-201ENST00000291525 LTN1O94822 1766 aa24.45■■□□□ 1.5
TFF3-201ENST00000291525 NME9Q86XW9 330 aa24.45■■□□□ 1.5
TFF3-201ENST00000291525 A0A1W2PP64 1363 aa24.44■■□□□ 1.5
TFF3-201ENST00000291525 NBPF14Q5TI25 921 aa24.43■■□□□ 1.5
TFF3-201ENST00000291525 RGPD3A6NKT7 1758 aaPredicted RBP24.43■■□□□ 1.5
TFF3-201ENST00000291525 RGPD4Q7Z3J3 1758 aa24.43■■□□□ 1.5
TFF3-201ENST00000291525 ST20-MTHFSA0A0A6YYL1 179 aa24.42■■□□□ 1.5
TFF3-201ENST00000291525 TESK2Q96S53 571 aa24.4■■□□□ 1.5
TFF3-201ENST00000291525 BCL9O00512 1426 aa24.4■■□□□ 1.5
TFF3-201ENST00000291525 EXOC5O00471 708 aa24.39■■□□□ 1.49
TFF3-201ENST00000291525 ERBB3P21860 1342 aa24.38■■□□□ 1.49
TFF3-201ENST00000291525 BCL11BQ9C0K0 894 aaPredicted RBP24.38■■□□□ 1.49
TFF3-201ENST00000291525 MARCH10Q8NA82 808 aaPredicted RBP24.37■■□□□ 1.49
TFF3-201ENST00000291525 TNS2Q63HR2 1409 aa24.36■■□□□ 1.49
TFF3-201ENST00000291525 PLSCR1O15162 318 aa24.36■■□□□ 1.49
TFF3-201ENST00000291525 NLRP2Q9NX02 1062 aa24.36■■□□□ 1.49
TFF3-201ENST00000291525 TMF1P82094 1093 aa24.34■■□□□ 1.49
TFF3-201ENST00000291525 FAM208AQ9UK61 1670 aaKnown RBP24.34■■□□□ 1.49
TFF3-201ENST00000291525 USP47Q96K76 1375 aa24.33■■□□□ 1.49
TFF3-201ENST00000291525 ANKRD24Q8TF21 1146 aa24.33■■□□□ 1.49
TFF3-201ENST00000291525 COG3Q96JB2 828 aa24.33■■□□□ 1.49
TFF3-201ENST00000291525 ANKRD36BQ8N2N9 1353 aa24.32■■□□□ 1.48
TFF3-201ENST00000291525 IL2RBP14784 551 aa24.31■■□□□ 1.48
TFF3-201ENST00000291525 CDCA8Q53HL2 280 aa24.29■■□□□ 1.48
TFF3-201ENST00000291525 IP6K1Q92551 441 aa24.29■■□□□ 1.48
TFF3-201ENST00000291525 NHSQ6T4R5 1651 aa24.27■■□□□ 1.48
TFF3-201ENST00000291525 TIMELESSQ9UNS1 1208 aa24.27■■□□□ 1.48
TFF3-201ENST00000291525 CLSPNQ9HAW4 1339 aa24.25■■□□□ 1.47
TFF3-201ENST00000291525 PTF1AQ7RTS3 328 aa24.24■■□□□ 1.47
TFF3-201ENST00000291525 AMPHP49418 695 aa24.23■■□□□ 1.47
TFF3-201ENST00000291525 SPON1Q9HCB6 807 aa24.23■■□□□ 1.47
TFF3-201ENST00000291525 RTL1A6NKG5 1358 aa24.22■■□□□ 1.47
TFF3-201ENST00000291525 MAP3K19Q56UN5 1328 aa24.22■■□□□ 1.47
TFF3-201ENST00000291525 LTV1Q96GA3 475 aaPredicted RBP24.22■■□□□ 1.47
TFF3-201ENST00000291525 HOXC9P31274 260 aa24.21■■□□□ 1.47
TFF3-201ENST00000291525 KAT6BQ8WYB5 2073 aa24.21■■□□□ 1.47
TFF3-201ENST00000291525 KIF20BQ96Q89 1820 aa24.21■■□□□ 1.47
TFF3-201ENST00000291525 KCNQ2O43526 872 aa24.2■■□□□ 1.46
TFF3-201ENST00000291525 TXNRD1Q16881 649 aa24.2■■□□□ 1.46
TFF3-201ENST00000291525 ANO8Q9HCE9 1232 aaPredicted RBP24.19■■□□□ 1.46
TFF3-201ENST00000291525 PPP1R1BQ9UD71 204 aaPredicted RBP24.19■■□□□ 1.46
TFF3-201ENST00000291525 PROM2Q8N271 834 aa24.18■■□□□ 1.46
TFF3-201ENST00000291525 ACSBG1Q96GR2 724 aa24.18■■□□□ 1.46
TFF3-201ENST00000291525 STK32BQ9NY57 414 aa24.18■■□□□ 1.46
TFF3-201ENST00000291525 CASZ1Q86V15 1759 aa24.17■■□□□ 1.46
TFF3-201ENST00000291525 FYB1O15117 783 aa24.17■■□□□ 1.46
TFF3-201ENST00000291525 SMG6Q86US8 1419 aaKnown RBP24.17■■□□□ 1.46
TFF3-201ENST00000291525 BTAF1O14981 1849 aa24.17■■□□□ 1.46
TFF3-201ENST00000291525 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
TFF3-201ENST00000291525 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
TFF3-201ENST00000291525 RGPD2P0DJD1 1756 aa24.14■■□□□ 1.46
TFF3-201ENST00000291525 MYOM1P52179 1685 aa24.14■■□□□ 1.45
TFF3-201ENST00000291525 DDX54Q8TDD1 881 aaKnown RBP24.13■■□□□ 1.45
TFF3-201ENST00000291525 FBLN1P23142 703 aa24.12■■□□□ 1.45
TFF3-201ENST00000291525 RRS1Q15050 365 aaKnown RBP24.12■■□□□ 1.45
TFF3-201ENST00000291525 SLC15A2Q16348 729 aa24.12■■□□□ 1.45
TFF3-201ENST00000291525 KIF24Q5T7B8 1368 aa24.11■■□□□ 1.45
TFF3-201ENST00000291525 FLT4P35916 1363 aa24.09■■□□□ 1.45
TFF3-201ENST00000291525 NSD3Q9BZ95 1437 aa24.09■■□□□ 1.45
TFF3-201ENST00000291525 CGNL1Q0VF96 1302 aa24.09■■□□□ 1.45
TFF3-201ENST00000291525 ZCRB1Q8TBF4 217 aaKnown RBP24.08■■□□□ 1.45
TFF3-201ENST00000291525 DOT1LQ8TEK3 1739 aa24.07■■□□□ 1.44
TFF3-201ENST00000291525 INSRP06213 1382 aa24.07■■□□□ 1.44
TFF3-201ENST00000291525 PAPPAQ13219 1627 aa24.07■■□□□ 1.44
TFF3-201ENST00000291525 MEGF6O75095 1541 aa24.07■■□□□ 1.44
TFF3-201ENST00000291525 DCAF8L1A6NGE4 600 aa24.07■■□□□ 1.44
TFF3-201ENST00000291525 SHANK3Q9BYB0 1731 aa24.07■■□□□ 1.44
TFF3-201ENST00000291525 RAPGEF4Q8WZA2 1011 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms