RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 ABCC4O15439 1325 aa25.39■■□□□ 1.65
TMED4-201ENST00000289577 SIRT2Q8IXJ6 389 aa25.39■■□□□ 1.65
TMED4-201ENST00000289577 CALD1Q05682 793 aaKnown RBP25.38■■□□□ 1.65
TMED4-201ENST00000289577 GAS2L3Q86XJ1 694 aa25.37■■□□□ 1.65
TMED4-201ENST00000289577 POLKQ9UBT6 870 aa25.37■■□□□ 1.65
TMED4-201ENST00000289577 CDK19Q9BWU1 502 aa25.37■■□□□ 1.65
TMED4-201ENST00000289577 C1orf115Q9H7X2 142 aa25.36■■□□□ 1.65
TMED4-201ENST00000289577 IFT57Q9NWB7 429 aa25.36■■□□□ 1.65
TMED4-201ENST00000289577 NPM1P06748 294 aaKnown RBP eCLIP25.36■■□□□ 1.65
TMED4-201ENST00000289577 ZNF853P0CG23 659 aa25.36■■□□□ 1.65
TMED4-201ENST00000289577 CLEC17AQ6ZS10 378 aa25.36■■□□□ 1.65
TMED4-201ENST00000289577 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
TMED4-201ENST00000289577 CABP1Q9NZU7 370 aa25.36■■□□□ 1.65
TMED4-201ENST00000289577 TSPYL6Q8N831 410 aa25.35■■□□□ 1.65
TMED4-201ENST00000289577 GNAI1P63096 354 aa25.35■■□□□ 1.65
TMED4-201ENST00000289577 NEO1Q92859 1461 aa25.34■■□□□ 1.65
TMED4-201ENST00000289577 ESPNB1AK53 854 aa25.34■■□□□ 1.65
TMED4-201ENST00000289577 PREX1Q8TCU6 1659 aa25.33■■□□□ 1.65
TMED4-201ENST00000289577 NAP1L5Q96NT1 182 aaPredicted RBP25.33■■□□□ 1.65
TMED4-201ENST00000289577 CDC45O75419 566 aa25.32■■□□□ 1.64
TMED4-201ENST00000289577 HSP90AA1P07900 732 aaKnown RBP25.32■■□□□ 1.64
TMED4-201ENST00000289577 ALKQ9UM73 1620 aa25.32■■□□□ 1.64
TMED4-201ENST00000289577 RBM42Q9BTD8 480 aaKnown RBP25.32■■□□□ 1.64
TMED4-201ENST00000289577 THUMPD2Q9BTF0 503 aaKnown RBP25.32■■□□□ 1.64
TMED4-201ENST00000289577 ERBB4Q15303 1308 aa25.32■■□□□ 1.64
TMED4-201ENST00000289577 ATP7BP35670 1465 aa25.31■■□□□ 1.64
TMED4-201ENST00000289577 RAPGEF3O95398 923 aa25.31■■□□□ 1.64
TMED4-201ENST00000289577 GAS2L2Q8NHY3 880 aa25.31■■□□□ 1.64
TMED4-201ENST00000289577 MBIPQ9NS73 344 aa25.31■■□□□ 1.64
TMED4-201ENST00000289577 KIF24Q5T7B8 1368 aa25.3■■□□□ 1.64
TMED4-201ENST00000289577 YEATS2Q9ULM3 1422 aa25.3■■□□□ 1.64
TMED4-201ENST00000289577 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
TMED4-201ENST00000289577 MAP2P11137 1827 aaKnown RBP25.29■■□□□ 1.64
TMED4-201ENST00000289577 FBLN1P23142 703 aa25.28■■□□□ 1.64
TMED4-201ENST00000289577 SSFA2P28290 1259 aa25.28■■□□□ 1.64
TMED4-201ENST00000289577 FOXD4L1Q9NU39 408 aa25.28■■□□□ 1.64
TMED4-201ENST00000289577 IBTKQ9P2D0 1353 aaPredicted RBP25.28■■□□□ 1.64
TMED4-201ENST00000289577 HMOX1P09601 288 aa25.28■■□□□ 1.64
TMED4-201ENST00000289577 API5Q9BZZ5 524 aaKnown RBP25.28■■□□□ 1.64
TMED4-201ENST00000289577 GSPT1P15170 499 aaKnown RBP25.27■■□□□ 1.64
TMED4-201ENST00000289577 IL13P35225 146 aa25.27■■□□□ 1.64
TMED4-201ENST00000289577 TWISTNBQ3B726 338 aaPredicted RBP25.27■■□□□ 1.64
TMED4-201ENST00000289577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.27■■□□□ 1.64
TMED4-201ENST00000289577 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
TMED4-201ENST00000289577 PLEKHM2Q8IWE5 1019 aa25.26■■□□□ 1.63
TMED4-201ENST00000289577 CFAP44Q96MT7 982 aa25.26■■□□□ 1.63
TMED4-201ENST00000289577 TRIM44Q96DX7 344 aaPredicted RBP25.25■■□□□ 1.63
TMED4-201ENST00000289577 DLC1Q96QB1 1528 aa25.25■■□□□ 1.63
TMED4-201ENST00000289577 CDK12Q9NYV4 1490 aaPredicted RBP25.25■■□□□ 1.63
TMED4-201ENST00000289577 GOLGA6L22H0YM25 854 aa25.24■■□□□ 1.63
TMED4-201ENST00000289577 RABEP1Q15276 862 aa25.24■■□□□ 1.63
TMED4-201ENST00000289577 KLHL40Q2TBA0 621 aa25.24■■□□□ 1.63
TMED4-201ENST00000289577 DCTPP1Q9H773 170 aa25.24■■□□□ 1.63
TMED4-201ENST00000289577 ELL2O00472 640 aaPredicted RBP25.24■■□□□ 1.63
TMED4-201ENST00000289577 BAG4O95429 457 aaKnown RBP25.24■■□□□ 1.63
TMED4-201ENST00000289577 C8orf58Q8NAV2 365 aa25.24■■□□□ 1.63
TMED4-201ENST00000289577 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
TMED4-201ENST00000289577 DLG5Q8TDM6 1919 aa25.23■■□□□ 1.63
TMED4-201ENST00000289577 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
TMED4-201ENST00000289577 PPP1R9BQ96SB3 815 aa25.22■■□□□ 1.63
TMED4-201ENST00000289577 EMILIN1Q9Y6C2 1016 aa25.21■■□□□ 1.63
TMED4-201ENST00000289577 CCDC173Q0VFZ6 552 aa25.21■■□□□ 1.63
TMED4-201ENST00000289577 TTC22Q5TAA0 569 aa25.21■■□□□ 1.63
TMED4-201ENST00000289577 AATKQ6ZMQ8 1374 aa25.2■■□□□ 1.63
TMED4-201ENST00000289577 CPSF1Q10570 1443 aaKnown RBP25.2■■□□□ 1.62
TMED4-201ENST00000289577 RIMS2Q9UQ26 1411 aa25.19■■□□□ 1.62
TMED4-201ENST00000289577 EDC4Q6P2E9 1401 aaKnown RBP25.19■■□□□ 1.62
TMED4-201ENST00000289577 INTS3Q68E01 1043 aaKnown RBP25.18■■□□□ 1.62
TMED4-201ENST00000289577 USP26Q9BXU7 913 aa25.18■■□□□ 1.62
TMED4-201ENST00000289577 CYP2E1P05181 493 aaPredicted RBP25.18■■□□□ 1.62
TMED4-201ENST00000289577 DDX49Q9Y6V7 483 aaKnown RBP25.17■■□□□ 1.62
TMED4-201ENST00000289577 NASPP49321 788 aaPredicted RBP25.17■■□□□ 1.62
TMED4-201ENST00000289577 NUCB2P80303 420 aa25.17■■□□□ 1.62
TMED4-201ENST00000289577 ATP10DQ9P241 1426 aa25.16■■□□□ 1.62
TMED4-201ENST00000289577 ANKRD44Q8N8A2 993 aa25.16■■□□□ 1.62
TMED4-201ENST00000289577 ZNF445P59923 1031 aa25.15■■□□□ 1.62
TMED4-201ENST00000289577 RRP9O43818 475 aaKnown RBP25.14■■□□□ 1.61
TMED4-201ENST00000289577 WAPLQ7Z5K2 1190 aa25.14■■□□□ 1.61
TMED4-201ENST00000289577 RGS12O14924 1447 aa25.13■■□□□ 1.61
TMED4-201ENST00000289577 FBXO31Q5XUX0 539 aaPredicted RBP25.13■■□□□ 1.61
TMED4-201ENST00000289577 AK9Q5TCS8 1911 aa25.13■■□□□ 1.61
TMED4-201ENST00000289577 SETD1AO15047 1707 aaKnown RBP25.13■■□□□ 1.61
TMED4-201ENST00000289577 RIMBP3CA6NJZ7 1639 aa25.13■■□□□ 1.61
TMED4-201ENST00000289577 RIMBP3BA6NNM3 1639 aa25.13■■□□□ 1.61
TMED4-201ENST00000289577 RIMBP3Q9UFD9 1639 aa25.13■■□□□ 1.61
TMED4-201ENST00000289577 NME9Q86XW9 330 aa25.13■■□□□ 1.61
TMED4-201ENST00000289577 C16orf71Q8IYS4 520 aaPredicted RBP25.13■■□□□ 1.61
TMED4-201ENST00000289577 RPAP2Q8IXW5 612 aaPredicted RBP25.12■■□□□ 1.61
TMED4-201ENST00000289577 FAM83GA6ND36 823 aa25.12■■□□□ 1.61
TMED4-201ENST00000289577 CWC22Q9HCG8 908 aaKnown RBP25.11■■□□□ 1.61
TMED4-201ENST00000289577 LMBRD1Q9NUN5 540 aa25.11■■□□□ 1.61
TMED4-201ENST00000289577 MCTP1Q6DN14 999 aa25.09■■□□□ 1.61
TMED4-201ENST00000289577 CEP85Q6P2H3 762 aa25.09■■□□□ 1.61
TMED4-201ENST00000289577 ZRANB1Q9UGI0 708 aa25.09■■□□□ 1.61
TMED4-201ENST00000289577 SDSP20132 328 aa25.09■■□□□ 1.61
TMED4-201ENST00000289577 HSP90AA2PQ14568 343 aaPredicted RBP25.09■■□□□ 1.61
TMED4-201ENST00000289577 ZSCAN30Q86W11 494 aa25.09■■□□□ 1.61
TMED4-201ENST00000289577 OTUD7AQ8TE49 926 aaPredicted RBP25.09■■□□□ 1.61
TMED4-201ENST00000289577 ANP32BQ92688 251 aaKnown RBP25.08■■□□□ 1.61
TMED4-201ENST00000289577 DCTN1Q14203 1278 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms