RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 FTSJ3Q8IY81 847 aaKnown RBP31.95■■■□□ 2.71
ROM1-201ENST00000278833 METP08581 1390 aa31.95■■■□□ 2.71
ROM1-201ENST00000278833 ATF7IPQ6VMQ6 1270 aa31.95■■■□□ 2.7
ROM1-201ENST00000278833 WAPLQ7Z5K2 1190 aa31.95■■■□□ 2.7
ROM1-201ENST00000278833 SSH1Q8WYL5 1049 aa31.95■■■□□ 2.7
ROM1-201ENST00000278833 TOPAZ1Q8N9V7 1692 aa31.94■■■□□ 2.7
ROM1-201ENST00000278833 TRIM27P14373 513 aa31.93■■■□□ 2.7
ROM1-201ENST00000278833 DAXXQ9UER7 740 aaPredicted RBP31.93■■■□□ 2.7
ROM1-201ENST00000278833 PDZRN3Q9UPQ7 1066 aa31.93■■■□□ 2.7
ROM1-201ENST00000278833 CALD1Q05682 793 aaKnown RBP31.9■■■□□ 2.7
ROM1-201ENST00000278833 PIK3R4Q99570 1358 aa31.89■■■□□ 2.7
ROM1-201ENST00000278833 KCNA6P17658 529 aa31.89■■■□□ 2.7
ROM1-201ENST00000278833 STRCP1A6NGW2 1772 aa31.89■■■□□ 2.7
ROM1-201ENST00000278833 IPO8O15397 1037 aaKnown RBP31.89■■■□□ 2.69
ROM1-201ENST00000278833 NFE2L2Q16236 605 aa31.89■■■□□ 2.69
ROM1-201ENST00000278833 LTBP4Q8N2S1 1624 aa31.88■■■□□ 2.69
ROM1-201ENST00000278833 PTPRUQ92729 1446 aa31.88■■■□□ 2.69
ROM1-201ENST00000278833 CHD2O14647 1828 aaKnown RBP31.87■■■□□ 2.69
ROM1-201ENST00000278833 PRKAR2BP31323 418 aa31.86■■■□□ 2.69
ROM1-201ENST00000278833 IL13P35225 146 aa31.86■■■□□ 2.69
ROM1-201ENST00000278833 AMOTL2Q9Y2J4 779 aa31.85■■■□□ 2.69
ROM1-201ENST00000278833 PTCH1Q13635 1447 aa31.84■■■□□ 2.69
ROM1-201ENST00000278833 DLG5Q8TDM6 1919 aa31.84■■■□□ 2.69
ROM1-201ENST00000278833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.84■■■□□ 2.69
ROM1-201ENST00000278833 NALCNQ8IZF0 1738 aa31.84■■■□□ 2.69
ROM1-201ENST00000278833 CCDC61Q9Y6R9 512 aa31.83■■■□□ 2.69
ROM1-201ENST00000278833 SMC5Q8IY18 1101 aa31.82■■■□□ 2.69
ROM1-201ENST00000278833 NUDT16Q96DE0 195 aaKnown RBP31.82■■■□□ 2.69
ROM1-201ENST00000278833 NOB1Q9ULX3 412 aaKnown RBP31.82■■■□□ 2.69
ROM1-201ENST00000278833 NWD1Q149M9 1564 aa31.81■■■□□ 2.68
ROM1-201ENST00000278833 ZNF692Q9BU19 519 aaPredicted RBP31.8■■■□□ 2.68
ROM1-201ENST00000278833 ZBTB40Q9NUA8 1239 aa31.8■■■□□ 2.68
ROM1-201ENST00000278833 IFT57Q9NWB7 429 aa31.8■■■□□ 2.68
ROM1-201ENST00000278833 ARHGAP45Q92619 1136 aa31.8■■■□□ 2.68
ROM1-201ENST00000278833 NFKBIBQ15653 356 aa31.79■■■□□ 2.68
ROM1-201ENST00000278833 ZNF853P0CG23 659 aa31.78■■■□□ 2.68
ROM1-201ENST00000278833 LMOD3Q0VAK6 560 aa31.78■■■□□ 2.68
ROM1-201ENST00000278833 SEC24BO95487 1268 aa31.78■■■□□ 2.68
ROM1-201ENST00000278833 TBC1D32Q96NH3 1257 aa31.78■■■□□ 2.68
ROM1-201ENST00000278833 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.77■■■□□ 2.68
ROM1-201ENST00000278833 BECN1Q14457 450 aa31.77■■■□□ 2.68
ROM1-201ENST00000278833 NME9Q86XW9 330 aa31.77■■■□□ 2.68
ROM1-201ENST00000278833 ITPRIPQ8IWB1 547 aa31.77■■■□□ 2.68
ROM1-201ENST00000278833 TMEM57Q8N5G2 664 aa31.77■■■□□ 2.68
ROM1-201ENST00000278833 UPF2Q9HAU5 1272 aaKnown RBP31.77■■■□□ 2.68
ROM1-201ENST00000278833 SLC4A3P48751 1232 aa31.76■■■□□ 2.68
ROM1-201ENST00000278833 GNAI1P63096 354 aa31.76■■■□□ 2.68
ROM1-201ENST00000278833 COG3Q96JB2 828 aa31.76■■■□□ 2.67
ROM1-201ENST00000278833 CHMP4BQ9H444 224 aaKnown RBP31.76■■■□□ 2.67
ROM1-201ENST00000278833 EMILIN1Q9Y6C2 1016 aa31.76■■■□□ 2.67
ROM1-201ENST00000278833 XRN1Q8IZH2 1706 aaKnown RBP31.75■■■□□ 2.67
ROM1-201ENST00000278833 RBM33Q96EV2 1170 aaKnown RBP31.75■■■□□ 2.67
ROM1-201ENST00000278833 PROSER2Q86WR7 435 aaPredicted RBP31.74■■■□□ 2.67
ROM1-201ENST00000278833 RGPD1P0DJD0 1748 aa31.73■■■□□ 2.67
ROM1-201ENST00000278833 OVOS2A0A0J9YW53 1432 aa31.73■■■□□ 2.67
ROM1-201ENST00000278833 OVOS2Q6IE36 1432 aa31.73■■■□□ 2.67
ROM1-201ENST00000278833 PHACTR3Q96KR7 559 aa31.72■■■□□ 2.67
ROM1-201ENST00000278833 PRR36Q9H6K5 1346 aa31.72■■■□□ 2.67
ROM1-201ENST00000278833 ROBO2Q9HCK4 1378 aa31.71■■■□□ 2.67
ROM1-201ENST00000278833 CERKQ8TCT0 537 aa31.71■■■□□ 2.67
ROM1-201ENST00000278833 VAMP4O75379 141 aa31.7■■■□□ 2.67
ROM1-201ENST00000278833 MRPL50Q8N5N7 158 aaKnown RBP31.69■■■□□ 2.66
ROM1-201ENST00000278833 TMEM94Q12767 1356 aa31.68■■■□□ 2.66
ROM1-201ENST00000278833 KIF24Q5T7B8 1368 aa31.68■■■□□ 2.66
ROM1-201ENST00000278833 PLEKHG3A1L390 1219 aa31.66■■■□□ 2.66
ROM1-201ENST00000278833 ABCC4O15439 1325 aa31.66■■■□□ 2.66
ROM1-201ENST00000278833 HMOX1P09601 288 aa31.65■■■□□ 2.66
ROM1-201ENST00000278833 FBLN1P23142 703 aa31.65■■■□□ 2.66
ROM1-201ENST00000278833 CFAP44Q96MT7 982 aa31.65■■■□□ 2.66
ROM1-201ENST00000278833 USP31Q70CQ4 1352 aa31.64■■■□□ 2.66
ROM1-201ENST00000278833 XIRP1Q702N8 1843 aaKnown RBP31.63■■■□□ 2.65
ROM1-201ENST00000278833 NUCB1Q02818 461 aa31.63■■■□□ 2.65
ROM1-201ENST00000278833 USP6P35125 1406 aa31.63■■■□□ 2.65
ROM1-201ENST00000278833 SSH2Q76I76 1423 aa31.63■■■□□ 2.65
ROM1-201ENST00000278833 ZRANB1Q9UGI0 708 aa31.63■■■□□ 2.65
ROM1-201ENST00000278833 MBIPQ9NS73 344 aa31.62■■■□□ 2.65
ROM1-201ENST00000278833 PEAK1Q9H792 1746 aa31.62■■■□□ 2.65
ROM1-201ENST00000278833 TTC21BQ7Z4L5 1316 aa31.61■■■□□ 2.65
ROM1-201ENST00000278833 FMN2Q9NZ56 1722 aa31.6■■■□□ 2.65
ROM1-201ENST00000278833 ZBTB7BO15156 539 aaPredicted RBP31.59■■■□□ 2.65
ROM1-201ENST00000278833 GCC1Q96CN9 775 aa31.58■■■□□ 2.65
ROM1-201ENST00000278833 GSE1Q14687 1217 aa31.57■■■□□ 2.64
ROM1-201ENST00000278833 C14orf37Q86TY3 774 aa31.57■■■□□ 2.64
ROM1-201ENST00000278833 NCOA3Q9Y6Q9 1424 aa31.56■■■□□ 2.64
ROM1-201ENST00000278833 RRS1Q15050 365 aaKnown RBP31.55■■■□□ 2.64
ROM1-201ENST00000278833 API5Q9BZZ5 524 aaKnown RBP31.55■■■□□ 2.64
ROM1-201ENST00000278833 ANTXR1Q9H6X2 564 aa31.55■■■□□ 2.64
ROM1-201ENST00000278833 HAP1P54257 671 aaPredicted RBP31.55■■■□□ 2.64
ROM1-201ENST00000278833 TWISTNBQ3B726 338 aaPredicted RBP31.55■■■□□ 2.64
ROM1-201ENST00000278833 THUMPD2Q9BTF0 503 aaKnown RBP31.55■■■□□ 2.64
ROM1-201ENST00000278833 USP54Q70EL1 1684 aa31.54■■■□□ 2.64
ROM1-201ENST00000278833 TSPYL6Q8N831 410 aa31.54■■■□□ 2.64
ROM1-201ENST00000278833 KIAA0232Q92628 1395 aa31.53■■■□□ 2.64
ROM1-201ENST00000278833 ACEP12821 1306 aa31.52■■■□□ 2.64
ROM1-201ENST00000278833 TTC21AQ8NDW8 1320 aa31.52■■■□□ 2.64
ROM1-201ENST00000278833 CHD1LQ86WJ1 897 aa31.52■■■□□ 2.64
ROM1-201ENST00000278833 EIF4A2Q14240 407 aaKnown RBP31.51■■■□□ 2.63
ROM1-201ENST00000278833 TBC1D2Q9BYX2 928 aa31.51■■■□□ 2.63
ROM1-201ENST00000278833 C19orf44Q9H6X5 657 aa31.51■■■□□ 2.63
ROM1-201ENST00000278833 ARHGEF10O15013 1369 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms