RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
USP6NL-201ENST00000277575 CCDC73Q6ZRK6 1079 aa13.57□□□□□ -0.24
USP6NL-201ENST00000277575 ATP10BO94823 1461 aa13.57□□□□□ -0.24
USP6NL-201ENST00000277575 RPAP2Q8IXW5 612 aaPredicted RBP13.57□□□□□ -0.24
USP6NL-201ENST00000277575 NOC3LQ8WTT2 800 aaKnown RBP13.57□□□□□ -0.24
USP6NL-201ENST00000277575 CCDC47Q96A33 483 aaKnown RBP13.56□□□□□ -0.24
USP6NL-201ENST00000277575 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
USP6NL-201ENST00000277575 RABEP1Q15276 862 aa13.56□□□□□ -0.24
USP6NL-201ENST00000277575 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
USP6NL-201ENST00000277575 TMEM57Q8N5G2 664 aa13.56□□□□□ -0.24
USP6NL-201ENST00000277575 TPM1P09493 284 aa13.56□□□□□ -0.24
USP6NL-201ENST00000277575 MCM2P49736 904 aa13.56□□□□□ -0.24
USP6NL-201ENST00000277575 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
USP6NL-201ENST00000277575 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
USP6NL-201ENST00000277575 PHF23Q9BUL5 403 aaPredicted RBP13.56□□□□□ -0.24
USP6NL-201ENST00000277575 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
USP6NL-201ENST00000277575 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-201ENST00000277575 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
USP6NL-201ENST00000277575 SSH1Q8WYL5 1049 aa13.55□□□□□ -0.24
USP6NL-201ENST00000277575 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
USP6NL-201ENST00000277575 ARID3AQ99856 593 aa13.55□□□□□ -0.24
USP6NL-201ENST00000277575 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
USP6NL-201ENST00000277575 MPHOSPH8Q99549 860 aa13.55□□□□□ -0.24
USP6NL-201ENST00000277575 NFKBIBQ15653 356 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 TTC39AQ5SRH9 613 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 CEP126Q9P2H0 1117 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 MTMR7Q9Y216 660 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 TPM2P07951 284 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 GNL3LQ9NVN8 582 aaKnown RBP13.54□□□□□ -0.24
USP6NL-201ENST00000277575 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 BACH2Q9BYV9 841 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 IFT57Q9NWB7 429 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 PLCH2O75038 1416 aa13.54□□□□□ -0.24
USP6NL-201ENST00000277575 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
USP6NL-201ENST00000277575 TAF7Q15545 349 aaPredicted RBP13.53□□□□□ -0.24
USP6NL-201ENST00000277575 PDCP20941 246 aa13.53□□□□□ -0.24
USP6NL-201ENST00000277575 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
USP6NL-201ENST00000277575 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
USP6NL-201ENST00000277575 ANKRD20A12PQ8NF67 263 aa13.53□□□□□ -0.24
USP6NL-201ENST00000277575 XBP1P17861 261 aa13.53□□□□□ -0.24
USP6NL-201ENST00000277575 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
USP6NL-201ENST00000277575 AACSQ86V21 672 aa13.52□□□□□ -0.24
USP6NL-201ENST00000277575 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.24
USP6NL-201ENST00000277575 PDE4CQ08493 712 aa13.52□□□□□ -0.24
USP6NL-201ENST00000277575 RRP12Q5JTH9 1297 aaKnown RBP13.52□□□□□ -0.24
USP6NL-201ENST00000277575 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.52□□□□□ -0.24
USP6NL-201ENST00000277575 EXOC6BQ9Y2D4 811 aa13.52□□□□□ -0.25
USP6NL-201ENST00000277575 STARD3NLO95772 234 aa13.51□□□□□ -0.25
USP6NL-201ENST00000277575 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
USP6NL-201ENST00000277575 PTPRKQ15262 1439 aa13.51□□□□□ -0.25
USP6NL-201ENST00000277575 BRMS1Q9HCU9 246 aa13.51□□□□□ -0.25
USP6NL-201ENST00000277575 NUP153P49790 1475 aaKnown RBP13.51□□□□□ -0.25
USP6NL-201ENST00000277575 ASXL2Q76L83 1435 aa13.51□□□□□ -0.25
USP6NL-201ENST00000277575 MAP4K4O95819 1239 aaPredicted RBP13.51□□□□□ -0.25
USP6NL-201ENST00000277575 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
USP6NL-201ENST00000277575 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
USP6NL-201ENST00000277575 ALDH1L2Q3SY69 923 aa13.5□□□□□ -0.25
USP6NL-201ENST00000277575 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
USP6NL-201ENST00000277575 KDM4AO75164 1064 aa13.5□□□□□ -0.25
USP6NL-201ENST00000277575 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
USP6NL-201ENST00000277575 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
USP6NL-201ENST00000277575 PCMTD1Q96MG8 357 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-201ENST00000277575 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-201ENST00000277575 DISP3Q9P2K9 1392 aa13.49□□□□□ -0.25
USP6NL-201ENST00000277575 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
USP6NL-201ENST00000277575 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
USP6NL-201ENST00000277575 TNRQ92752 1358 aa13.49□□□□□ -0.25
USP6NL-201ENST00000277575 ACEP12821 1306 aa13.49□□□□□ -0.25
USP6NL-201ENST00000277575 IKQ13123 557 aaPredicted RBP13.49□□□□□ -0.25
USP6NL-201ENST00000277575 NACAP1Q9BZK3 213 aa13.49□□□□□ -0.25
USP6NL-201ENST00000277575 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
USP6NL-201ENST00000277575 CCDC43Q96MW1 224 aaKnown RBP13.48□□□□□ -0.25
USP6NL-201ENST00000277575 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
USP6NL-201ENST00000277575 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
USP6NL-201ENST00000277575 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
USP6NL-201ENST00000277575 NSD2O96028 1365 aa13.48□□□□□ -0.25
USP6NL-201ENST00000277575 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
USP6NL-201ENST00000277575 CCAR2Q8N163 923 aaKnown RBP13.47□□□□□ -0.25
USP6NL-201ENST00000277575 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
USP6NL-201ENST00000277575 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 F6X3S4 739 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 MBD3O95983 291 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 KIF1BPQ96EK5 621 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 A2MP01023 1474 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 TRAK2O60296 914 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
USP6NL-201ENST00000277575 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
USP6NL-201ENST00000277575 FIBPO43427 364 aa13.46□□□□□ -0.26
USP6NL-201ENST00000277575 ZSCAN25Q6NSZ9 544 aa13.46□□□□□ -0.26
USP6NL-201ENST00000277575 BLOC1S2Q6QNY1 142 aa13.45□□□□□ -0.26
USP6NL-201ENST00000277575 ANKRD1Q15327 319 aa13.45□□□□□ -0.26
USP6NL-201ENST00000277575 NKTRP30414 1462 aaKnown RBP13.45□□□□□ -0.26
USP6NL-201ENST00000277575 FBLN1P23142 703 aa13.45□□□□□ -0.26
USP6NL-201ENST00000277575 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
USP6NL-201ENST00000277575 RNF214Q8ND24 703 aa13.45□□□□□ -0.26
USP6NL-201ENST00000277575 PPP1R1BQ9UD71 204 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms