RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 PIK3C2AO00443 1686 aa24.31■■□□□ 1.48
SEC22C-202ENST00000273156 LMO7Q8WWI1 1683 aa24.31■■□□□ 1.48
SEC22C-202ENST00000273156 COL5A2P05997 1499 aaPredicted RBP24.31■■□□□ 1.48
SEC22C-202ENST00000273156 USP31Q70CQ4 1352 aa24.31■■□□□ 1.48
SEC22C-202ENST00000273156 BRWD3Q6RI45 1802 aa24.31■■□□□ 1.48
SEC22C-202ENST00000273156 AKAP12Q02952 1782 aa24.3■■□□□ 1.48
SEC22C-202ENST00000273156 EDC4Q6P2E9 1401 aaKnown RBP24.3■■□□□ 1.48
SEC22C-202ENST00000273156 CCER2I3L3R5 266 aa24.29■■□□□ 1.48
SEC22C-202ENST00000273156 PDE3BQ13370 1112 aa24.29■■□□□ 1.48
SEC22C-202ENST00000273156 CRB1P82279 1406 aa24.29■■□□□ 1.48
SEC22C-202ENST00000273156 THSD7AQ9UPZ6 1657 aa24.29■■□□□ 1.48
SEC22C-202ENST00000273156 CD163L1Q9NR16 1453 aa24.29■■□□□ 1.48
SEC22C-202ENST00000273156 FAM196AQ6ZSG2 479 aa24.28■■□□□ 1.48
SEC22C-202ENST00000273156 BAG6P46379 1132 aa24.27■■□□□ 1.48
SEC22C-202ENST00000273156 SOX12O15370 315 aa24.26■■□□□ 1.47
SEC22C-202ENST00000273156 TOM1L2Q6ZVM7 507 aa24.26■■□□□ 1.47
SEC22C-202ENST00000273156 A0A1W2PP64 1363 aa24.26■■□□□ 1.47
SEC22C-202ENST00000273156 WDR17Q8IZU2 1322 aa24.25■■□□□ 1.47
SEC22C-202ENST00000273156 NME9Q86XW9 330 aa24.24■■□□□ 1.47
SEC22C-202ENST00000273156 MON2Q7Z3U7 1717 aa24.24■■□□□ 1.47
SEC22C-202ENST00000273156 DEFB132Q7Z7B7 95 aa24.24■■□□□ 1.47
SEC22C-202ENST00000273156 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
SEC22C-202ENST00000273156 PRKRIP1Q9H875 184 aaPredicted RBP24.24■■□□□ 1.47
SEC22C-202ENST00000273156 AXIN2Q9Y2T1 843 aa24.23■■□□□ 1.47
SEC22C-202ENST00000273156 PANK3Q9H999 370 aa24.22■■□□□ 1.47
SEC22C-202ENST00000273156 CSB-PGBD3P0DP91 1061 aa24.21■■□□□ 1.47
SEC22C-202ENST00000273156 FAM182BQ5T319 152 aa24.21■■□□□ 1.47
SEC22C-202ENST00000273156 ABCC6O95255 1503 aa24.21■■□□□ 1.47
SEC22C-202ENST00000273156 NFAT5O94916 1531 aa24.2■■□□□ 1.46
SEC22C-202ENST00000273156 CARD10Q9BWT7 1032 aa24.2■■□□□ 1.46
SEC22C-202ENST00000273156 ANKRD36BQ8N2N9 1353 aa24.19■■□□□ 1.46
SEC22C-202ENST00000273156 PER1O15534 1290 aaPredicted RBP24.17■■□□□ 1.46
SEC22C-202ENST00000273156 DDB1Q16531 1140 aa24.17■■□□□ 1.46
SEC22C-202ENST00000273156 COG3Q96JB2 828 aa24.17■■□□□ 1.46
SEC22C-202ENST00000273156 DISP2A7MBM2 1401 aa24.16■■□□□ 1.46
SEC22C-202ENST00000273156 COL18A1P39060 1754 aa24.16■■□□□ 1.46
SEC22C-202ENST00000273156 USP54Q70EL1 1684 aa24.15■■□□□ 1.46
SEC22C-202ENST00000273156 OVOS2A0A0J9YW53 1432 aa24.14■■□□□ 1.46
SEC22C-202ENST00000273156 TRIM37O94972 964 aa24.14■■□□□ 1.46
SEC22C-202ENST00000273156 OVOS2Q6IE36 1432 aa24.14■■□□□ 1.46
SEC22C-202ENST00000273156 EN1Q05925 392 aaPredicted RBP24.12■■□□□ 1.45
SEC22C-202ENST00000273156 RALBP1Q15311 655 aa24.12■■□□□ 1.45
SEC22C-202ENST00000273156 YTHDC1Q96MU7 727 aaKnown RBP24.12■■□□□ 1.45
SEC22C-202ENST00000273156 KNSTRNQ9Y448 316 aa24.12■■□□□ 1.45
SEC22C-202ENST00000273156 ERBB3P21860 1342 aa24.11■■□□□ 1.45
SEC22C-202ENST00000273156 RGPD1P0DJD0 1748 aa24.11■■□□□ 1.45
SEC22C-202ENST00000273156 PARD3Q8TEW0 1356 aa24.11■■□□□ 1.45
SEC22C-202ENST00000273156 APBA3O96018 575 aa24.1■■□□□ 1.45
SEC22C-202ENST00000273156 OVOS2A0A0G2JMS6 1433 aa24.1■■□□□ 1.45
SEC22C-202ENST00000273156 PARP4Q9UKK3 1724 aaKnown RBP24.1■■□□□ 1.45
SEC22C-202ENST00000273156 CNGB1Q14028 1251 aaPredicted RBP24.09■■□□□ 1.45
SEC22C-202ENST00000273156 IP6K1Q92551 441 aa24.09■■□□□ 1.45
SEC22C-202ENST00000273156 NLRP2Q9NX02 1062 aa24.09■■□□□ 1.45
SEC22C-202ENST00000273156 EXOC5O00471 708 aa24.08■■□□□ 1.45
SEC22C-202ENST00000273156 ANKRD24Q8TF21 1146 aa24.07■■□□□ 1.44
SEC22C-202ENST00000273156 MYOM1P52179 1685 aa24.06■■□□□ 1.44
SEC22C-202ENST00000273156 FYB1O15117 783 aa24.06■■□□□ 1.44
SEC22C-202ENST00000273156 CAMKK2Q96RR4 588 aa24.06■■□□□ 1.44
SEC22C-202ENST00000273156 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
SEC22C-202ENST00000273156 AMPHP49418 695 aa24.04■■□□□ 1.44
SEC22C-202ENST00000273156 BCL9O00512 1426 aa24.04■■□□□ 1.44
SEC22C-202ENST00000273156 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
SEC22C-202ENST00000273156 EZH2Q15910 746 aaKnown RBP24.03■■□□□ 1.44
SEC22C-202ENST00000273156 IL2RBP14784 551 aa24.02■■□□□ 1.44
SEC22C-202ENST00000273156 CC2D1BQ5T0F9 858 aaKnown RBP24.02■■□□□ 1.44
SEC22C-202ENST00000273156 MARCH10Q8NA82 808 aaPredicted RBP24.02■■□□□ 1.44
SEC22C-202ENST00000273156 MRS2Q9HD23 443 aa24.02■■□□□ 1.44
SEC22C-202ENST00000273156 MAP3K19Q56UN5 1328 aa24.02■■□□□ 1.44
SEC22C-202ENST00000273156 MYBBP1AQ9BQG0 1328 aaKnown RBP24.01■■□□□ 1.43
SEC22C-202ENST00000273156 BCL11BQ9C0K0 894 aaPredicted RBP24.01■■□□□ 1.43
SEC22C-202ENST00000273156 GGNBP2Q9H3C7 697 aa24.01■■□□□ 1.43
SEC22C-202ENST00000273156 TNS1Q9HBL0 1735 aaKnown RBP24■■□□□ 1.43
SEC22C-202ENST00000273156 LRRC37A3O60309 1634 aa24■■□□□ 1.43
SEC22C-202ENST00000273156 NPC1L1Q9UHC9 1359 aa24■■□□□ 1.43
SEC22C-202ENST00000273156 RTL1A6NKG5 1358 aa23.99■■□□□ 1.43
SEC22C-202ENST00000273156 HOXC9P31274 260 aa23.99■■□□□ 1.43
SEC22C-202ENST00000273156 AMER1Q5JTC6 1135 aaPredicted RBP23.99■■□□□ 1.43
SEC22C-202ENST00000273156 CARD14Q9BXL6 1004 aa23.99■■□□□ 1.43
SEC22C-202ENST00000273156 TNS2Q63HR2 1409 aa23.98■■□□□ 1.43
SEC22C-202ENST00000273156 LTN1O94822 1766 aa23.98■■□□□ 1.43
SEC22C-202ENST00000273156 RGPD5Q99666 1765 aa23.98■■□□□ 1.43
SEC22C-202ENST00000273156 PLSCR1O15162 318 aa23.97■■□□□ 1.43
SEC22C-202ENST00000273156 NBPF14Q5TI25 921 aa23.97■■□□□ 1.43
SEC22C-202ENST00000273156 CCDC184Q52MB2 194 aa23.96■■□□□ 1.43
SEC22C-202ENST00000273156 LTV1Q96GA3 475 aaPredicted RBP23.96■■□□□ 1.43
SEC22C-202ENST00000273156 KIF24Q5T7B8 1368 aa23.95■■□□□ 1.42
SEC22C-202ENST00000273156 CGNL1Q0VF96 1302 aa23.95■■□□□ 1.42
SEC22C-202ENST00000273156 PSDA5PKW4 1024 aaPredicted RBP23.95■■□□□ 1.42
SEC22C-202ENST00000273156 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.42
SEC22C-202ENST00000273156 PEAK1Q9H792 1746 aa23.95■■□□□ 1.42
SEC22C-202ENST00000273156 WNK3Q9BYP7 1800 aa23.93■■□□□ 1.42
SEC22C-202ENST00000273156 R3HDM1Q15032 1099 aaKnown RBP23.93■■□□□ 1.42
SEC22C-202ENST00000273156 RRS1Q15050 365 aaKnown RBP23.93■■□□□ 1.42
SEC22C-202ENST00000273156 SMG6Q86US8 1419 aaKnown RBP23.93■■□□□ 1.42
SEC22C-202ENST00000273156 FBLN1P23142 703 aa23.92■■□□□ 1.42
SEC22C-202ENST00000273156 FLT4P35916 1363 aa23.89■■□□□ 1.42
SEC22C-202ENST00000273156 INSRP06213 1382 aa23.89■■□□□ 1.41
SEC22C-202ENST00000273156 FAM208AQ9UK61 1670 aaKnown RBP23.88■■□□□ 1.41
SEC22C-202ENST00000273156 FAM9BQ8IZU0 186 aa23.87■■□□□ 1.41
SEC22C-202ENST00000273156 HSP90AB2PQ58FF8 381 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms