RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 CCDC184Q52MB2 194 aa19.89■□□□□ 0.78
TSPAN3-201ENST00000267970 CCDC30Q5VVM6 783 aa19.89■□□□□ 0.78
TSPAN3-201ENST00000267970 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
TSPAN3-201ENST00000267970 PPP2R1AP30153 589 aa19.89■□□□□ 0.77
TSPAN3-201ENST00000267970 SPATA32Q96LK8 384 aa19.88■□□□□ 0.77
TSPAN3-201ENST00000267970 GNAI2P04899 355 aa19.88■□□□□ 0.77
TSPAN3-201ENST00000267970 FERMT3Q86UX7 667 aa19.88■□□□□ 0.77
TSPAN3-201ENST00000267970 JAKMIP1Q96N16 626 aaKnown RBP19.88■□□□□ 0.77
TSPAN3-201ENST00000267970 DYDC1Q8WWB3 177 aa19.87■□□□□ 0.77
TSPAN3-201ENST00000267970 CCDC69A6NI79 296 aa19.87■□□□□ 0.77
TSPAN3-201ENST00000267970 GPATCH11Q8N954 259 aa19.87■□□□□ 0.77
TSPAN3-201ENST00000267970 BACH2Q9BYV9 841 aa19.87■□□□□ 0.77
TSPAN3-201ENST00000267970 SSR1P43307 286 aaKnown RBP19.87■□□□□ 0.77
TSPAN3-201ENST00000267970 HMGN5P82970 282 aaKnown RBP19.86■□□□□ 0.77
TSPAN3-201ENST00000267970 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
TSPAN3-201ENST00000267970 ERLIN2O94905 339 aa19.86■□□□□ 0.77
TSPAN3-201ENST00000267970 ABTB2Q8N961 1025 aa19.86■□□□□ 0.77
TSPAN3-201ENST00000267970 CCP110O43303 1012 aa19.86■□□□□ 0.77
TSPAN3-201ENST00000267970 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
TSPAN3-201ENST00000267970 CCDC113Q9H0I3 377 aa19.85■□□□□ 0.77
TSPAN3-201ENST00000267970 POLR3GO15318 223 aaPredicted RBP19.85■□□□□ 0.77
TSPAN3-201ENST00000267970 XPCQ01831 940 aaPredicted RBP19.85■□□□□ 0.77
TSPAN3-201ENST00000267970 DHX8Q14562 1220 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-201ENST00000267970 LRRCC1Q9C099 1032 aa19.85■□□□□ 0.77
TSPAN3-201ENST00000267970 MIS18AQ9NYP9 233 aa19.85■□□□□ 0.77
TSPAN3-201ENST00000267970 PDRG1Q9NUG6 133 aa19.84■□□□□ 0.77
TSPAN3-201ENST00000267970 AACSQ86V21 672 aa19.84■□□□□ 0.77
TSPAN3-201ENST00000267970 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
TSPAN3-201ENST00000267970 KIF6Q6ZMV9 814 aa19.84■□□□□ 0.77
TSPAN3-201ENST00000267970 GNAI3P08754 354 aa19.84■□□□□ 0.77
TSPAN3-201ENST00000267970 CCDC158Q5M9N0 1113 aa19.84■□□□□ 0.77
TSPAN3-201ENST00000267970 ESPNB1AK53 854 aa19.83■□□□□ 0.77
TSPAN3-201ENST00000267970 GUCY1B3Q02153 619 aa19.83■□□□□ 0.77
TSPAN3-201ENST00000267970 PDCL2Q8N4E4 241 aa19.83■□□□□ 0.77
TSPAN3-201ENST00000267970 IPO4Q8TEX9 1081 aaKnown RBP19.83■□□□□ 0.77
TSPAN3-201ENST00000267970 PDCP20941 246 aa19.83■□□□□ 0.76
TSPAN3-201ENST00000267970 KRT85P78386 507 aa19.83■□□□□ 0.76
TSPAN3-201ENST00000267970 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.76
TSPAN3-201ENST00000267970 MATR3P43243 847 aaKnown RBP eCLIP19.83■□□□□ 0.76
TSPAN3-201ENST00000267970 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.76
TSPAN3-201ENST00000267970 KIAA1328Q86T90 577 aa19.83■□□□□ 0.76
TSPAN3-201ENST00000267970 SRRTQ9BXP5 876 aaKnown RBP19.83■□□□□ 0.76
TSPAN3-201ENST00000267970 WIZO95785 1651 aa19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 NBPF1Q3BBV0 1214 aa19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 NUP62CLQ9H1M0 184 aa19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 TRMT1Q9NXH9 659 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 PPFIA3O75145 1194 aa19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 RBM5P52756 815 aaKnown RBP eCLIP19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 ZNF526Q8TF50 670 aaPredicted RBP19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
TSPAN3-201ENST00000267970 SPDYE4A6NLX3 237 aa19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 TNNT1P13805 278 aa19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 MCM4P33991 863 aa19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 RSPH4AQ5TD94 716 aa19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 SULT6B1Q6IMI4 303 aa19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 WDR33Q9C0J8 1336 aaKnown RBP19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 KLHL10Q6JEL2 608 aa19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 UPF3BQ9BZI7 483 aaKnown RBP19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 CASTP20810 708 aaKnown RBP19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 ZHX1Q9UKY1 873 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 HDGFL1Q5TGJ6 251 aa19.81■□□□□ 0.76
TSPAN3-201ENST00000267970 USP5P45974 858 aa19.8■□□□□ 0.76
TSPAN3-201ENST00000267970 ESCO1Q5FWF5 840 aa19.8■□□□□ 0.76
TSPAN3-201ENST00000267970 CCDC83Q8IWF9 413 aa19.8■□□□□ 0.76
TSPAN3-201ENST00000267970 CFAP100Q494V2 611 aa19.8■□□□□ 0.76
TSPAN3-201ENST00000267970 BCCIPQ9P287 314 aaKnown RBP eCLIP19.8■□□□□ 0.76
TSPAN3-201ENST00000267970 GOLGA6L10A0A0M3HER8 536 aa19.79■□□□□ 0.76
TSPAN3-201ENST00000267970 GIMAP7Q8NHV1 300 aa19.79■□□□□ 0.76
TSPAN3-201ENST00000267970 GCC1Q96CN9 775 aa19.79■□□□□ 0.76
TSPAN3-201ENST00000267970 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
TSPAN3-201ENST00000267970 ATF3P18847 181 aa19.78■□□□□ 0.76
TSPAN3-201ENST00000267970 ZRSR2Q15696 482 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-201ENST00000267970 CCDC82Q8N4S0 544 aa19.78■□□□□ 0.76
TSPAN3-201ENST00000267970 GOLGA6L7A0A1B0GV03 622 aa19.78■□□□□ 0.76
TSPAN3-201ENST00000267970 SLC3A2P08195 630 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-201ENST00000267970 MCM2P49736 904 aa19.78■□□□□ 0.76
TSPAN3-201ENST00000267970 CPLX3Q8WVH0 158 aa19.78■□□□□ 0.76
TSPAN3-201ENST00000267970 EIF3JO75822 258 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 EIF5P55010 431 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 CHMP4BP1P59074 171 aa19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 ERLIN1O75477 346 aa19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 WWC2Q6AWC2 1192 aa19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 BICDL1Q6ZP65 573 aa19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 TRIM22Q8IYM9 498 aa19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 RRS1Q15050 365 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-201ENST00000267970 STIM1Q13586 685 aa19.77■□□□□ 0.75
TSPAN3-201ENST00000267970 BLOC1S2Q6QNY1 142 aa19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 GDPD2Q9HCC8 539 aa19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 GOPCQ9HD26 462 aa19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 CGNQ9P2M7 1197 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 EXOC6BQ9Y2D4 811 aa19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 SRGAP3O43295 1099 aa19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 EPB41L2O43491 1005 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 ISM2Q6H9L7 571 aa19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 RAI14Q9P0K7 980 aa19.76■□□□□ 0.75
TSPAN3-201ENST00000267970 HIP1O00291 1037 aa19.75■□□□□ 0.75
TSPAN3-201ENST00000267970 TXNDC2Q86VQ3 553 aa19.75■□□□□ 0.75
TSPAN3-201ENST00000267970 JMYQ8N9B5 988 aa19.75■□□□□ 0.75
TSPAN3-201ENST00000267970 TDO2P48775 406 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms