RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 HSP90AB2PQ58FF8 381 aa26.86■■□□□ 1.89
LYSMD2-201ENST00000267838 ANP32EQ9BTT0 268 aa26.86■■□□□ 1.89
LYSMD2-201ENST00000267838 RBM19Q9Y4C8 960 aaKnown RBP26.86■■□□□ 1.89
LYSMD2-201ENST00000267838 FOXO3O43524 673 aa26.85■■□□□ 1.89
LYSMD2-201ENST00000267838 PPP4R2Q9NY27 417 aa26.84■■□□□ 1.89
LYSMD2-201ENST00000267838 RIPK4P57078 832 aa26.84■■□□□ 1.89
LYSMD2-201ENST00000267838 TRIM35Q9UPQ4 493 aa26.84■■□□□ 1.89
LYSMD2-201ENST00000267838 XIRP1Q702N8 1843 aaKnown RBP26.83■■□□□ 1.89
LYSMD2-201ENST00000267838 RGPD1P0DJD0 1748 aa26.83■■□□□ 1.89
LYSMD2-201ENST00000267838 KIF24Q5T7B8 1368 aa26.82■■□□□ 1.88
LYSMD2-201ENST00000267838 AMPHP49418 695 aa26.82■■□□□ 1.88
LYSMD2-201ENST00000267838 TRPM3Q9HCF6 1732 aaPredicted RBP26.82■■□□□ 1.88
LYSMD2-201ENST00000267838 MSH6P52701 1360 aa26.81■■□□□ 1.88
LYSMD2-201ENST00000267838 CADPS2Q86UW7 1296 aa26.81■■□□□ 1.88
LYSMD2-201ENST00000267838 PHACTR3Q96KR7 559 aa26.81■■□□□ 1.88
LYSMD2-201ENST00000267838 XPCQ01831 940 aaPredicted RBP26.79■■□□□ 1.88
LYSMD2-201ENST00000267838 NFE2L2Q16236 605 aa26.79■■□□□ 1.88
LYSMD2-201ENST00000267838 MYH16Q9H6N6 1097 aa26.79■■□□□ 1.88
LYSMD2-201ENST00000267838 KRT28Q7Z3Y7 464 aa26.78■■□□□ 1.88
LYSMD2-201ENST00000267838 NFAT5O94916 1531 aa26.77■■□□□ 1.88
LYSMD2-201ENST00000267838 LTN1O94822 1766 aa26.77■■□□□ 1.88
LYSMD2-201ENST00000267838 SULT6B1Q6IMI4 303 aa26.76■■□□□ 1.88
LYSMD2-201ENST00000267838 ZNF335Q9H4Z2 1342 aaPredicted RBP26.76■■□□□ 1.87
LYSMD2-201ENST00000267838 HOXC9P31274 260 aa26.76■■□□□ 1.87
LYSMD2-201ENST00000267838 IL16Q14005 1332 aa26.76■■□□□ 1.87
LYSMD2-201ENST00000267838 ARHGEF10O15013 1369 aa26.76■■□□□ 1.87
LYSMD2-201ENST00000267838 AEBP1Q8IUX7 1158 aa26.75■■□□□ 1.87
LYSMD2-201ENST00000267838 RTL1A6NKG5 1358 aa26.75■■□□□ 1.87
LYSMD2-201ENST00000267838 KCNH5Q8NCM2 988 aa26.74■■□□□ 1.87
LYSMD2-201ENST00000267838 PLIN1O60240 522 aa26.74■■□□□ 1.87
LYSMD2-201ENST00000267838 SLIT3O75094 1523 aa26.72■■□□□ 1.87
LYSMD2-201ENST00000267838 DLG5Q8TDM6 1919 aa26.72■■□□□ 1.87
LYSMD2-201ENST00000267838 ALS2Q96Q42 1657 aa26.71■■□□□ 1.87
LYSMD2-201ENST00000267838 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.7■■□□□ 1.86
LYSMD2-201ENST00000267838 LMOD2Q6P5Q4 547 aa26.69■■□□□ 1.86
LYSMD2-201ENST00000267838 PHRF1Q9P1Y6 1649 aaKnown RBP26.69■■□□□ 1.86
LYSMD2-201ENST00000267838 IGSF1Q8N6C5 1336 aa26.69■■□□□ 1.86
LYSMD2-201ENST00000267838 FANCIQ9NVI1 1328 aa26.69■■□□□ 1.86
LYSMD2-201ENST00000267838 USP19O94966 1318 aa26.68■■□□□ 1.86
LYSMD2-201ENST00000267838 LMOD3Q0VAK6 560 aa26.68■■□□□ 1.86
LYSMD2-201ENST00000267838 EYA1Q99502 592 aa26.68■■□□□ 1.86
LYSMD2-201ENST00000267838 KDRP35968 1356 aa26.68■■□□□ 1.86
LYSMD2-201ENST00000267838 IP6K1Q92551 441 aa26.67■■□□□ 1.86
LYSMD2-201ENST00000267838 NPHP3Q7Z494 1330 aa26.67■■□□□ 1.86
LYSMD2-201ENST00000267838 B4GALNT3Q6L9W6 998 aa26.66■■□□□ 1.86
LYSMD2-201ENST00000267838 EXOC6Q8TAG9 804 aa26.66■■□□□ 1.86
LYSMD2-201ENST00000267838 TSR2Q969E8 191 aaKnown RBP26.66■■□□□ 1.86
LYSMD2-201ENST00000267838 BCAR3O75815 825 aa26.66■■□□□ 1.86
LYSMD2-201ENST00000267838 GCP02774 474 aa26.66■■□□□ 1.86
LYSMD2-201ENST00000267838 CALD1Q05682 793 aaKnown RBP26.65■■□□□ 1.86
LYSMD2-201ENST00000267838 DDX17Q92841 729 aaKnown RBP26.65■■□□□ 1.86
LYSMD2-201ENST00000267838 CT47B1P0C2W7 299 aaPredicted RBP26.62■■□□□ 1.85
LYSMD2-201ENST00000267838 RARSP54136 660 aaKnown RBP26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 C20orf194Q5TEA3 1177 aa26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 ARHGEF25Q86VW2 580 aa26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 LTV1Q96GA3 475 aaPredicted RBP26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 PXDNQ92626 1479 aa26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 EXOSC9Q06265 439 aaKnown RBP26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 THUMPD2Q9BTF0 503 aaKnown RBP26.61■■□□□ 1.85
LYSMD2-201ENST00000267838 ZBTB7CA1YPR0 619 aa26.6■■□□□ 1.85
LYSMD2-201ENST00000267838 PLEKHG5O94827 1062 aa26.6■■□□□ 1.85
LYSMD2-201ENST00000267838 BRINP3Q76B58 766 aa26.6■■□□□ 1.85
LYSMD2-201ENST00000267838 CRBNQ96SW2 442 aa26.6■■□□□ 1.85
LYSMD2-201ENST00000267838 MED1Q15648 1581 aaPredicted RBP26.6■■□□□ 1.85
LYSMD2-201ENST00000267838 TNS3Q68CZ2 1445 aa26.59■■□□□ 1.85
LYSMD2-201ENST00000267838 CCDC136Q96JN2 1154 aa26.58■■□□□ 1.85
LYSMD2-201ENST00000267838 IFT57Q9NWB7 429 aa26.58■■□□□ 1.85
LYSMD2-201ENST00000267838 SLAIN2Q9P270 581 aa26.58■■□□□ 1.85
LYSMD2-201ENST00000267838 FAM83GA6ND36 823 aa26.57■■□□□ 1.84
LYSMD2-201ENST00000267838 GNAI1P63096 354 aa26.57■■□□□ 1.84
LYSMD2-201ENST00000267838 LAS1LQ9Y4W2 734 aaKnown RBP26.57■■□□□ 1.84
LYSMD2-201ENST00000267838 ZNF853P0CG23 659 aa26.56■■□□□ 1.84
LYSMD2-201ENST00000267838 SPATA31A3Q5VYP0 1347 aa26.54■■□□□ 1.84
LYSMD2-201ENST00000267838 DCTN1Q14203 1278 aa26.54■■□□□ 1.84
LYSMD2-201ENST00000267838 MTHFSDQ2M296 383 aaKnown RBP26.54■■□□□ 1.84
LYSMD2-201ENST00000267838 GAS2L2Q8NHY3 880 aa26.53■■□□□ 1.84
LYSMD2-201ENST00000267838 CFAP44Q96MT7 982 aa26.53■■□□□ 1.84
LYSMD2-201ENST00000267838 CANXP27824 592 aaKnown RBP26.52■■□□□ 1.84
LYSMD2-201ENST00000267838 RGPD2P0DJD1 1756 aa26.51■■□□□ 1.83
LYSMD2-201ENST00000267838 NBPF6Q5VWK0 638 aa26.51■■□□□ 1.83
LYSMD2-201ENST00000267838 USHBP1Q8N6Y0 703 aa26.51■■□□□ 1.83
LYSMD2-201ENST00000267838 NBPF4Q96M43 638 aa26.51■■□□□ 1.83
LYSMD2-201ENST00000267838 CRYBG1Q9Y4K1 1723 aa26.5■■□□□ 1.83
LYSMD2-201ENST00000267838 PDE3AQ14432 1141 aa26.5■■□□□ 1.83
LYSMD2-201ENST00000267838 BCL2L13Q9BXK5 485 aa26.5■■□□□ 1.83
LYSMD2-201ENST00000267838 MBIPQ9NS73 344 aa26.5■■□□□ 1.83
LYSMD2-201ENST00000267838 FRAT1Q92837 279 aaPredicted RBP26.49■■□□□ 1.83
LYSMD2-201ENST00000267838 ZC3H6P61129 1189 aaKnown RBP26.48■■□□□ 1.83
LYSMD2-201ENST00000267838 MCM10Q7L590 875 aa26.48■■□□□ 1.83
LYSMD2-201ENST00000267838 ANKRD24Q8TF21 1146 aa26.47■■□□□ 1.83
LYSMD2-201ENST00000267838 RGPD5Q99666 1765 aa26.47■■□□□ 1.83
LYSMD2-201ENST00000267838 SOS2Q07890 1332 aaPredicted RBP26.47■■□□□ 1.83
LYSMD2-201ENST00000267838 RTF1Q92541 710 aaKnown RBP26.46■■□□□ 1.83
LYSMD2-201ENST00000267838 LRRC59Q96AG4 307 aaKnown RBP26.46■■□□□ 1.83
LYSMD2-201ENST00000267838 AXIN2Q9Y2T1 843 aa26.46■■□□□ 1.83
LYSMD2-201ENST00000267838 SMC4Q9NTJ3 1288 aa26.46■■□□□ 1.83
LYSMD2-201ENST00000267838 HTATSF1O43719 755 aaKnown RBP26.45■■□□□ 1.82
LYSMD2-201ENST00000267838 CABLES1Q8TDN4 633 aa26.45■■□□□ 1.82
LYSMD2-201ENST00000267838 SSH1Q8WYL5 1049 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms