RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 TRPM3Q9HCF6 1732 aaPredicted RBP15.11■□□□□ 0.01
SCAF11-201ENST00000266589 FOXO3O43524 673 aa15.11■□□□□ 0.01
SCAF11-201ENST00000266589 PPP4R2Q9NY27 417 aa15.11■□□□□ 0.01
SCAF11-201ENST00000266589 RIPK4P57078 832 aa15.1■□□□□ 0.01
SCAF11-201ENST00000266589 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
SCAF11-201ENST00000266589 LTN1O94822 1766 aa15.1■□□□□ 0.01
SCAF11-201ENST00000266589 AMPHP49418 695 aa15.09■□□□□ 0.01
SCAF11-201ENST00000266589 XPCQ01831 940 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-201ENST00000266589 PHACTR3Q96KR7 559 aa15.08■□□□□ 0.01
SCAF11-201ENST00000266589 MSH6P52701 1360 aa15.08■□□□□ 0
SCAF11-201ENST00000266589 NFAT5O94916 1531 aa15.08■□□□□ 0
SCAF11-201ENST00000266589 KIF24Q5T7B8 1368 aa15.08■□□□□ 0
SCAF11-201ENST00000266589 DLG5Q8TDM6 1919 aa15.07■□□□□ 0
SCAF11-201ENST00000266589 PLIN1O60240 522 aa15.07■□□□□ 0
SCAF11-201ENST00000266589 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
SCAF11-201ENST00000266589 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
SCAF11-201ENST00000266589 NFE2L2Q16236 605 aa15.07■□□□□ 0
SCAF11-201ENST00000266589 SULT6B1Q6IMI4 303 aa15.07■□□□□ 0
SCAF11-201ENST00000266589 MYH16Q9H6N6 1097 aa15.07■□□□□ 0
SCAF11-201ENST00000266589 AEBP1Q8IUX7 1158 aa15.06■□□□□ 0
SCAF11-201ENST00000266589 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
SCAF11-201ENST00000266589 ZNF335Q9H4Z2 1342 aaPredicted RBP15.06■□□□□ 0
SCAF11-201ENST00000266589 ARHGEF10O15013 1369 aa15.06■□□□□ 0
SCAF11-201ENST00000266589 HOXC9P31274 260 aa15.05■□□□□ 0
SCAF11-201ENST00000266589 KRT28Q7Z3Y7 464 aa15.05■□□□□ 0
SCAF11-201ENST00000266589 IL16Q14005 1332 aa15.05■□□□□ -0
SCAF11-201ENST00000266589 RTL1A6NKG5 1358 aa15.05■□□□□ -0
SCAF11-201ENST00000266589 ALS2Q96Q42 1657 aa15.05■□□□□ -0
SCAF11-201ENST00000266589 SLIT3O75094 1523 aa15.04■□□□□ -0
SCAF11-201ENST00000266589 KCNH5Q8NCM2 988 aa15.04■□□□□ -0
SCAF11-201ENST00000266589 B4GALNT3Q6L9W6 998 aa15.04■□□□□ -0
SCAF11-201ENST00000266589 LMOD2Q6P5Q4 547 aa15.04■□□□□ -0
SCAF11-201ENST00000266589 PHRF1Q9P1Y6 1649 aaKnown RBP15.03■□□□□ -0
SCAF11-201ENST00000266589 FANCIQ9NVI1 1328 aa15.03■□□□□ -0
SCAF11-201ENST00000266589 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
SCAF11-201ENST00000266589 EXOC6Q8TAG9 804 aa15.02■□□□□ -0
SCAF11-201ENST00000266589 TSR2Q969E8 191 aaKnown RBP15.02■□□□□ -0
SCAF11-201ENST00000266589 IGSF1Q8N6C5 1336 aa15.02□□□□□ -0.01
SCAF11-201ENST00000266589 BCAR3O75815 825 aa15.01□□□□□ -0.01
SCAF11-201ENST00000266589 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
SCAF11-201ENST00000266589 EYA1Q99502 592 aa15.01□□□□□ -0.01
SCAF11-201ENST00000266589 KDRP35968 1356 aa15.01□□□□□ -0.01
SCAF11-201ENST00000266589 USP19O94966 1318 aa15.01□□□□□ -0.01
SCAF11-201ENST00000266589 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
SCAF11-201ENST00000266589 PLEKHG5O94827 1062 aa15□□□□□ -0.01
SCAF11-201ENST00000266589 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
SCAF11-201ENST00000266589 GCP02774 474 aa14.99□□□□□ -0.01
SCAF11-201ENST00000266589 CALD1Q05682 793 aaKnown RBP14.99□□□□□ -0.01
SCAF11-201ENST00000266589 C20orf194Q5TEA3 1177 aa14.99□□□□□ -0.01
SCAF11-201ENST00000266589 IP6K1Q92551 441 aa14.99□□□□□ -0.01
SCAF11-201ENST00000266589 LTV1Q96GA3 475 aaPredicted RBP14.99□□□□□ -0.01
SCAF11-201ENST00000266589 THUMPD2Q9BTF0 503 aaKnown RBP14.99□□□□□ -0.01
SCAF11-201ENST00000266589 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
SCAF11-201ENST00000266589 CCDC136Q96JN2 1154 aa14.99□□□□□ -0.01
SCAF11-201ENST00000266589 CRBNQ96SW2 442 aa14.99□□□□□ -0.01
SCAF11-201ENST00000266589 RARSP54136 660 aaKnown RBP14.98□□□□□ -0.01
SCAF11-201ENST00000266589 PXDNQ92626 1479 aa14.98□□□□□ -0.01
SCAF11-201ENST00000266589 MED1Q15648 1581 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-201ENST00000266589 EXOSC9Q06265 439 aaKnown RBP14.97□□□□□ -0.01
SCAF11-201ENST00000266589 FAM83GA6ND36 823 aa14.97□□□□□ -0.01
SCAF11-201ENST00000266589 CT47B1P0C2W7 299 aaPredicted RBP14.97□□□□□ -0.01
SCAF11-201ENST00000266589 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
SCAF11-201ENST00000266589 TNS3Q68CZ2 1445 aa14.97□□□□□ -0.01
SCAF11-201ENST00000266589 ARHGEF25Q86VW2 580 aa14.96□□□□□ -0.01
SCAF11-201ENST00000266589 BRINP3Q76B58 766 aa14.96□□□□□ -0.02
SCAF11-201ENST00000266589 RGPD2P0DJD1 1756 aa14.95□□□□□ -0.02
SCAF11-201ENST00000266589 CANXP27824 592 aaKnown RBP14.95□□□□□ -0.02
SCAF11-201ENST00000266589 DCTN1Q14203 1278 aa14.95□□□□□ -0.02
SCAF11-201ENST00000266589 IFT57Q9NWB7 429 aa14.95□□□□□ -0.02
SCAF11-201ENST00000266589 GNAI1P63096 354 aa14.94□□□□□ -0.02
SCAF11-201ENST00000266589 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
SCAF11-201ENST00000266589 BCL2L13Q9BXK5 485 aa14.94□□□□□ -0.02
SCAF11-201ENST00000266589 SLAIN2Q9P270 581 aa14.94□□□□□ -0.02
SCAF11-201ENST00000266589 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
SCAF11-201ENST00000266589 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
SCAF11-201ENST00000266589 ZNF853P0CG23 659 aa14.93□□□□□ -0.02
SCAF11-201ENST00000266589 USHBP1Q8N6Y0 703 aa14.93□□□□□ -0.02
SCAF11-201ENST00000266589 FRAT1Q92837 279 aaPredicted RBP14.93□□□□□ -0.02
SCAF11-201ENST00000266589 CFAP44Q96MT7 982 aa14.93□□□□□ -0.02
SCAF11-201ENST00000266589 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
SCAF11-201ENST00000266589 MCM10Q7L590 875 aa14.92□□□□□ -0.02
SCAF11-201ENST00000266589 GAS2L2Q8NHY3 880 aa14.92□□□□□ -0.02
SCAF11-201ENST00000266589 MBIPQ9NS73 344 aa14.92□□□□□ -0.02
SCAF11-201ENST00000266589 NBPF6Q5VWK0 638 aa14.91□□□□□ -0.02
SCAF11-201ENST00000266589 NBPF4Q96M43 638 aa14.91□□□□□ -0.02
SCAF11-201ENST00000266589 ZC3H6P61129 1189 aaKnown RBP14.91□□□□□ -0.02
SCAF11-201ENST00000266589 PDE3AQ14432 1141 aa14.91□□□□□ -0.02
SCAF11-201ENST00000266589 CAMTA1Q9Y6Y1 1673 aa14.9□□□□□ -0.02
SCAF11-201ENST00000266589 ANKRD24Q8TF21 1146 aa14.89□□□□□ -0.03
SCAF11-201ENST00000266589 RTF1Q92541 710 aaKnown RBP14.89□□□□□ -0.03
SCAF11-201ENST00000266589 LRRC59Q96AG4 307 aaKnown RBP14.89□□□□□ -0.03
SCAF11-201ENST00000266589 SMC4Q9NTJ3 1288 aa14.89□□□□□ -0.03
SCAF11-201ENST00000266589 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
SCAF11-201ENST00000266589 SSH1Q8WYL5 1049 aa14.89□□□□□ -0.03
SCAF11-201ENST00000266589 AXIN2Q9Y2T1 843 aa14.89□□□□□ -0.03
SCAF11-201ENST00000266589 LRRC37A3O60309 1634 aa14.89□□□□□ -0.03
SCAF11-201ENST00000266589 NHSL1Q5SYE7 1610 aa14.88□□□□□ -0.03
SCAF11-201ENST00000266589 CRB1P82279 1406 aa14.88□□□□□ -0.03
SCAF11-201ENST00000266589 COL18A1P39060 1754 aa14.88□□□□□ -0.03
SCAF11-201ENST00000266589 NCAPD2Q15021 1401 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms