RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
XRCC1-201ENST00000262887 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
XRCC1-201ENST00000262887 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
XRCC1-201ENST00000262887 SMAP1Q8IYB5 467 aaPredicted RBP18.44■□□□□ 0.54
XRCC1-201ENST00000262887 ZCCHC11Q5TAX3 1644 aaKnown RBP18.44■□□□□ 0.54
XRCC1-201ENST00000262887 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
XRCC1-201ENST00000262887 COL3A1P02461 1466 aaPredicted RBP18.43■□□□□ 0.54
XRCC1-201ENST00000262887 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
XRCC1-201ENST00000262887 CABP2Q9NPB3 220 aa18.42■□□□□ 0.54
XRCC1-201ENST00000262887 PPRC1Q5VV67 1664 aaKnown RBP18.42■□□□□ 0.54
XRCC1-201ENST00000262887 SASS6Q6UVJ0 657 aa18.42■□□□□ 0.54
XRCC1-201ENST00000262887 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
XRCC1-201ENST00000262887 CCDC39Q9UFE4 941 aa18.42■□□□□ 0.54
XRCC1-201ENST00000262887 BRPF1P55201 1214 aaPredicted RBP18.41■□□□□ 0.54
XRCC1-201ENST00000262887 PKP1Q13835 747 aa18.41■□□□□ 0.54
XRCC1-201ENST00000262887 TULP4Q9NRJ4 1543 aa18.41■□□□□ 0.54
XRCC1-201ENST00000262887 REREQ9P2R6 1566 aa18.41■□□□□ 0.54
XRCC1-201ENST00000262887 FANCAO15360 1455 aa18.41■□□□□ 0.54
XRCC1-201ENST00000262887 PRPF40AO75400 957 aaKnown RBP18.41■□□□□ 0.54
XRCC1-201ENST00000262887 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
XRCC1-201ENST00000262887 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
XRCC1-201ENST00000262887 CWC22Q9HCG8 908 aaKnown RBP18.4■□□□□ 0.54
XRCC1-201ENST00000262887 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
XRCC1-201ENST00000262887 GPT2Q8TD30 523 aa18.4■□□□□ 0.54
XRCC1-201ENST00000262887 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
XRCC1-201ENST00000262887 ARAP3Q8WWN8 1544 aa18.4■□□□□ 0.54
XRCC1-201ENST00000262887 A0A1W2PP64 1363 aa18.39■□□□□ 0.54
XRCC1-201ENST00000262887 LRSAM1Q6UWE0 723 aa18.39■□□□□ 0.53
XRCC1-201ENST00000262887 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
XRCC1-201ENST00000262887 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
XRCC1-201ENST00000262887 ARID3AQ99856 593 aa18.38■□□□□ 0.53
XRCC1-201ENST00000262887 PIK3R4Q99570 1358 aa18.38■□□□□ 0.53
XRCC1-201ENST00000262887 PPLO60437 1756 aa18.38■□□□□ 0.53
XRCC1-201ENST00000262887 PTCH1Q13635 1447 aa18.37■□□□□ 0.53
XRCC1-201ENST00000262887 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
XRCC1-201ENST00000262887 SAFB2Q14151 953 aaKnown RBP eCLIP18.36■□□□□ 0.53
XRCC1-201ENST00000262887 PLEKHM2Q8IWE5 1019 aa18.36■□□□□ 0.53
XRCC1-201ENST00000262887 GLI2P10070 1586 aa18.36■□□□□ 0.53
XRCC1-201ENST00000262887 USP26Q9BXU7 913 aa18.36■□□□□ 0.53
XRCC1-201ENST00000262887 SYCE3A1L190 88 aa18.36■□□□□ 0.53
XRCC1-201ENST00000262887 ST18O60284 1047 aa18.36■□□□□ 0.53
XRCC1-201ENST00000262887 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
XRCC1-201ENST00000262887 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
XRCC1-201ENST00000262887 VAMP4O75379 141 aa18.35■□□□□ 0.53
XRCC1-201ENST00000262887 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
XRCC1-201ENST00000262887 INTS3Q68E01 1043 aaKnown RBP18.35■□□□□ 0.53
XRCC1-201ENST00000262887 ABCC4O15439 1325 aa18.34■□□□□ 0.53
XRCC1-201ENST00000262887 SRPK2P78362 688 aaKnown RBP18.34■□□□□ 0.53
XRCC1-201ENST00000262887 BCL11BQ9C0K0 894 aaPredicted RBP18.34■□□□□ 0.53
XRCC1-201ENST00000262887 FYB1O15117 783 aa18.33■□□□□ 0.53
XRCC1-201ENST00000262887 ZHX1Q9UKY1 873 aaPredicted RBP18.33■□□□□ 0.53
XRCC1-201ENST00000262887 FCHSD2O94868 740 aa18.33■□□□□ 0.52
XRCC1-201ENST00000262887 TSPYL6Q8N831 410 aa18.33■□□□□ 0.52
XRCC1-201ENST00000262887 CCDC94Q9BW85 323 aaPredicted RBP18.33■□□□□ 0.52
XRCC1-201ENST00000262887 ZDHHC9Q9Y397 364 aa18.33■□□□□ 0.52
XRCC1-201ENST00000262887 ARHGEF28Q8N1W1 1705 aaKnown RBP18.33■□□□□ 0.52
XRCC1-201ENST00000262887 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
XRCC1-201ENST00000262887 PRKAR2BP31323 418 aa18.32■□□□□ 0.52
XRCC1-201ENST00000262887 RPGRIP1LQ68CZ1 1315 aa18.32■□□□□ 0.52
XRCC1-201ENST00000262887 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
XRCC1-201ENST00000262887 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
XRCC1-201ENST00000262887 LRRC7Q96NW7 1537 aa18.32■□□□□ 0.52
XRCC1-201ENST00000262887 NUTM2DQ5VT03 806 aaPredicted RBP18.31■□□□□ 0.52
XRCC1-201ENST00000262887 BBXQ8WY36 941 aaPredicted RBP18.31■□□□□ 0.52
XRCC1-201ENST00000262887 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
XRCC1-201ENST00000262887 PTMAP06454 111 aaKnown RBP18.31■□□□□ 0.52
XRCC1-201ENST00000262887 KIAA2012Q0VF49 1180 aa18.31■□□□□ 0.52
XRCC1-201ENST00000262887 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
XRCC1-201ENST00000262887 PRDM10Q9NQV6 1147 aa18.31■□□□□ 0.52
XRCC1-201ENST00000262887 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
XRCC1-201ENST00000262887 NSFL1CQ9UNZ2 370 aaKnown RBP18.31■□□□□ 0.52
XRCC1-201ENST00000262887 MBD3O95983 291 aa18.3■□□□□ 0.52
XRCC1-201ENST00000262887 UTP14CQ5TAP6 766 aaKnown RBP18.3■□□□□ 0.52
XRCC1-201ENST00000262887 RNF214Q8ND24 703 aa18.3■□□□□ 0.52
XRCC1-201ENST00000262887 CHAMP1Q96JM3 812 aa18.3■□□□□ 0.52
XRCC1-201ENST00000262887 TERF2IPQ9NYB0 399 aa18.3■□□□□ 0.52
XRCC1-201ENST00000262887 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
XRCC1-201ENST00000262887 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
XRCC1-201ENST00000262887 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
XRCC1-201ENST00000262887 DCTPP1Q9H773 170 aa18.3■□□□□ 0.52
XRCC1-201ENST00000262887 NPATQ14207 1427 aa18.29■□□□□ 0.52
XRCC1-201ENST00000262887 MYRIPQ8NFW9 859 aa18.29■□□□□ 0.52
XRCC1-201ENST00000262887 API5Q9BZZ5 524 aaKnown RBP18.29■□□□□ 0.52
XRCC1-201ENST00000262887 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
XRCC1-201ENST00000262887 ASXL2Q76L83 1435 aa18.28■□□□□ 0.52
XRCC1-201ENST00000262887 ABCA9Q8IUA7 1624 aa18.28■□□□□ 0.52
XRCC1-201ENST00000262887 GNAI1P63096 354 aa18.28■□□□□ 0.52
XRCC1-201ENST00000262887 FOXD4L5Q5VV16 416 aaPredicted RBP18.28■□□□□ 0.52
XRCC1-201ENST00000262887 FOXD4L4Q8WXT5 416 aaPredicted RBP18.28■□□□□ 0.52
XRCC1-201ENST00000262887 DMTNQ08495 405 aa18.27■□□□□ 0.52
XRCC1-201ENST00000262887 TWISTNBQ3B726 338 aaPredicted RBP18.27■□□□□ 0.52
XRCC1-201ENST00000262887 DNTTIP2Q5QJE6 756 aaKnown RBP18.27■□□□□ 0.52
XRCC1-201ENST00000262887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.27■□□□□ 0.52
XRCC1-201ENST00000262887 ATAD2Q6PL18 1390 aa18.27■□□□□ 0.52
XRCC1-201ENST00000262887 ANKRD26Q9UPS8 1709 aa18.27■□□□□ 0.52
XRCC1-201ENST00000262887 SDSP20132 328 aa18.27■□□□□ 0.52
XRCC1-201ENST00000262887 NFE2L2Q16236 605 aa18.27■□□□□ 0.52
XRCC1-201ENST00000262887 TSPY26PQ9H489 355 aa18.27■□□□□ 0.51
XRCC1-201ENST00000262887 IFT57Q9NWB7 429 aa18.27■□□□□ 0.51
XRCC1-201ENST00000262887 REC8O95072 547 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms