RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
PTPN3-201ENST00000262539 TEFQ10587 303 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 ATF7IPQ6VMQ6 1270 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 GNAI3P08754 354 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 METP08581 1390 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
PTPN3-201ENST00000262539 ADAMTS13Q76LX8 1427 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 RPAP2Q8IXW5 612 aaPredicted RBP10.28□□□□□ -0.76
PTPN3-201ENST00000262539 KRI1Q8N9T8 703 aaKnown RBP10.28□□□□□ -0.76
PTPN3-201ENST00000262539 RARSP54136 660 aaKnown RBP10.28□□□□□ -0.76
PTPN3-201ENST00000262539 ABTB2Q8N961 1025 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 EXOC6Q8TAG9 804 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 KIAA0232Q92628 1395 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 KCNJ4P48050 445 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 FAM161AQ3B820 660 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 NPHP4O75161 1426 aaPredicted RBP10.27□□□□□ -0.76
PTPN3-201ENST00000262539 IRX6P78412 446 aaPredicted RBP10.27□□□□□ -0.76
PTPN3-201ENST00000262539 RAPGEF4Q8WZA2 1011 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 NBR1Q14596 966 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 LTKP29376 864 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 C1orf141Q5JVX7 400 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 TULP4Q9NRJ4 1543 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 CEBPAP49715 358 aaPredicted RBP10.27□□□□□ -0.77
PTPN3-201ENST00000262539 NME9Q86XW9 330 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 POLR1AO95602 1720 aaPredicted RBP10.27□□□□□ -0.77
PTPN3-201ENST00000262539 ARHGEF10O15013 1369 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 CDCA7LQ96GN5 454 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 USP6P35125 1406 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
PTPN3-201ENST00000262539 ADGRL3Q9HAR2 1447 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 CDC42BPGQ6DT37 1551 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 CCT4P50991 539 aaKnown RBP10.26□□□□□ -0.77
PTPN3-201ENST00000262539 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 TWISTNBQ3B726 338 aaPredicted RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 CCDC30Q5VVM6 783 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 RBM19Q9Y4C8 960 aaKnown RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 PTPRCP08575 1304 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 EXOSC9Q06265 439 aaKnown RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 ITPRIPQ8IWB1 547 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 TMEM131LA2VDJ0 1609 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 GOLGA6L22H0YM25 854 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 SULT6B1Q6IMI4 303 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 PTMAP06454 111 aaKnown RBP10.24□□□□□ -0.77
PTPN3-201ENST00000262539 MSH6P52701 1360 aa10.24□□□□□ -0.77
PTPN3-201ENST00000262539 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
PTPN3-201ENST00000262539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.774e-6■■■■□ 19.3
PTPN3-201ENST00000262539 ROBO2Q9HCK4 1378 aa10.24□□□□□ -0.77
PTPN3-201ENST00000262539 PREX1Q8TCU6 1659 aa10.24□□□□□ -0.77
PTPN3-201ENST00000262539 IL13P35225 146 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 CPS1P31327 1500 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 DCCP43146 1447 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 EMILIN1Q9Y6C2 1016 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 SPG7Q9UQ90 795 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 RRP7AQ9Y3A4 280 aaKnown RBP10.22□□□□□ -0.77
PTPN3-201ENST00000262539 TRIM44Q96DX7 344 aaPredicted RBP10.22□□□□□ -0.77
PTPN3-201ENST00000262539 PTMSP20962 102 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 MSH5O43196 834 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 HDAC1Q13547 482 aaPredicted RBP10.22□□□□□ -0.77
PTPN3-201ENST00000262539 IP6K1Q92551 441 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
PTPN3-201ENST00000262539 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
PTPN3-201ENST00000262539 DCAF8L1A6NGE4 600 aa10.21□□□□□ -0.77
PTPN3-201ENST00000262539 CHMP4CQ96CF2 233 aa10.21□□□□□ -0.77
PTPN3-201ENST00000262539 TSPYL4Q9UJ04 414 aa10.21□□□□□ -0.78
PTPN3-201ENST00000262539 COG6Q9Y2V7 657 aa10.21□□□□□ -0.78
PTPN3-201ENST00000262539 PDE4AP27815 886 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 HSP90B1P14625 803 aaKnown RBP10.2□□□□□ -0.78
PTPN3-201ENST00000262539 MAP3K19Q56UN5 1328 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 NEXNQ0ZGT2 675 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 MROH2AA6NES4 1674 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 GOLGA6L6A8MZA4 724 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 IPO9Q96P70 1041 aaKnown RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 IGSF1Q8N6C5 1336 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 TAF7Q15545 349 aaPredicted RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 GNL2Q13823 731 aaKnown RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 CHL1O00533 1208 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 EIF4A2Q14240 407 aaKnown RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 MCCP23508 829 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 PRR36Q9H6K5 1346 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 PPLO60437 1756 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 DNTTIP2Q5QJE6 756 aaKnown RBP10.18□□□□□ -0.78
PTPN3-201ENST00000262539 ZNF530Q6P9A1 599 aaPredicted RBP10.17□□□□□ -0.78
PTPN3-201ENST00000262539 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 SSH1Q8WYL5 1049 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 HMOX1P09601 288 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 NOP58Q9Y2X3 529 aaKnown RBP10.17□□□□□ -0.78
PTPN3-201ENST00000262539 NCAPD2Q15021 1401 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 RGS3P49796 1198 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 SRCIN1Q9C0H9 1055 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms