RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
VSX2-201ENST00000261980 NUCB2P80303 420 aa20.24■□□□□ 0.83
VSX2-201ENST00000261980 INO80Q9ULG1 1556 aaPredicted RBP20.23■□□□□ 0.83
VSX2-201ENST00000261980 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
VSX2-201ENST00000261980 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
VSX2-201ENST00000261980 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
VSX2-201ENST00000261980 OTUD7AQ8TE49 926 aaPredicted RBP20.22■□□□□ 0.83
VSX2-201ENST00000261980 ZMYM3Q14202 1370 aa20.22■□□□□ 0.83
VSX2-201ENST00000261980 POGZQ7Z3K3 1410 aa20.22■□□□□ 0.83
VSX2-201ENST00000261980 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
VSX2-201ENST00000261980 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
VSX2-201ENST00000261980 NOLC1Q14978 699 aaKnown RBP eCLIP20.21■□□□□ 0.83
VSX2-201ENST00000261980 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
VSX2-201ENST00000261980 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
VSX2-201ENST00000261980 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
VSX2-201ENST00000261980 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
VSX2-201ENST00000261980 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 ZNF771Q7L3S4 317 aaPredicted RBP20.2■□□□□ 0.82
VSX2-201ENST00000261980 KIDINS220Q9ULH0 1771 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 KIF3AQ9Y496 699 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 KANK1Q14678 1352 aa20.19■□□□□ 0.82
VSX2-201ENST00000261980 IBTKQ9P2D0 1353 aaPredicted RBP20.19■□□□□ 0.82
VSX2-201ENST00000261980 CDC45O75419 566 aa20.19■□□□□ 0.82
VSX2-201ENST00000261980 UTP14CQ5TAP6 766 aaKnown RBP20.19■□□□□ 0.82
VSX2-201ENST00000261980 PDCL2Q8N4E4 241 aa20.19■□□□□ 0.82
VSX2-201ENST00000261980 GADD45BO75293 160 aaPredicted RBP20.18■□□□□ 0.82
VSX2-201ENST00000261980 SPC24Q8NBT2 197 aa20.18■□□□□ 0.82
VSX2-201ENST00000261980 SMARCA5O60264 1052 aaPredicted RBP20.18■□□□□ 0.82
VSX2-201ENST00000261980 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
VSX2-201ENST00000261980 TSPY26PQ9H489 355 aa20.18■□□□□ 0.82
VSX2-201ENST00000261980 POLR3AO14802 1390 aaPredicted RBP20.17■□□□□ 0.82
VSX2-201ENST00000261980 SIRT2Q8IXJ6 389 aa20.16■□□□□ 0.82
VSX2-201ENST00000261980 NAP1L2Q9ULW6 460 aaPredicted RBP20.16■□□□□ 0.82
VSX2-201ENST00000261980 RABEP1Q15276 862 aa20.16■□□□□ 0.82
VSX2-201ENST00000261980 CYP2E1P05181 493 aaPredicted RBP20.15■□□□□ 0.82
VSX2-201ENST00000261980 TMPOP42166 694 aaKnown RBP20.15■□□□□ 0.82
VSX2-201ENST00000261980 TMEM132EQ6IEE7 984 aa20.15■□□□□ 0.82
VSX2-201ENST00000261980 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.82
VSX2-201ENST00000261980 MCM5P33992 734 aa20.14■□□□□ 0.82
VSX2-201ENST00000261980 CLEC17AQ6ZS10 378 aa20.14■□□□□ 0.82
VSX2-201ENST00000261980 ADCY5O95622 1261 aa20.14■□□□□ 0.81
VSX2-201ENST00000261980 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.81
VSX2-201ENST00000261980 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
VSX2-201ENST00000261980 SCAF11Q99590 1463 aaKnown RBP20.13■□□□□ 0.81
VSX2-201ENST00000261980 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 NEO1Q92859 1461 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
VSX2-201ENST00000261980 FBLN1P23142 703 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 NEK4P51957 841 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 NAA30Q147X3 362 aaPredicted RBP20.13■□□□□ 0.81
VSX2-201ENST00000261980 YEATS2Q9ULM3 1422 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 TSHZ3Q63HK5 1081 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 CFAP74Q9C0B2 1584 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 RIOK3O14730 519 aaKnown RBP20.12■□□□□ 0.81
VSX2-201ENST00000261980 ST18O60284 1047 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 TRERF1Q96PN7 1200 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 USP26Q9BXU7 913 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 PPIP5K1Q6PFW1 1433 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 CFAP65Q6ZU64 1925 aaKnown RBP20.11■□□□□ 0.81
VSX2-201ENST00000261980 LARP6Q9BRS8 491 aaKnown RBP20.11■□□□□ 0.81
VSX2-201ENST00000261980 TMEM51Q9NW97 253 aa20.11■□□□□ 0.81
VSX2-201ENST00000261980 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
VSX2-201ENST00000261980 PIBF1Q8WXW3 757 aa20.1■□□□□ 0.81
VSX2-201ENST00000261980 MLH3Q9UHC1 1453 aa20.1■□□□□ 0.81
VSX2-201ENST00000261980 GTPBP4Q9BZE4 634 aaKnown RBP20.1■□□□□ 0.81
VSX2-201ENST00000261980 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
VSX2-201ENST00000261980 ZBTB7BO15156 539 aaPredicted RBP20.1■□□□□ 0.81
VSX2-201ENST00000261980 ATP10AO60312 1499 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 SYNMO15061 1565 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 MAP3K4Q9Y6R4 1608 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 HECW2Q9P2P5 1572 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 PLEKHM2Q8IWE5 1019 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 PYCARDQ9ULZ3 195 aa20.08■□□□□ 0.81
VSX2-201ENST00000261980 CDK11BP21127 795 aaKnown RBP20.08■□□□□ 0.8
VSX2-201ENST00000261980 KIF20AO95235 890 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 LETM1O95202 739 aaPredicted RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 HMGN5P82970 282 aaKnown RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 PPRC1Q5VV67 1664 aaKnown RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 ERICH4A6NGS2 130 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 PRIMPOLQ96LW4 560 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 ABCA6Q8N139 1617 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 GCC1Q96CN9 775 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 MROH1Q8NDA8 1641 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 SDSP20132 328 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
VSX2-201ENST00000261980 TMX3Q96JJ7 454 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 CHMP4AQ9BY43 222 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 FRMPD1Q5SYB0 1578 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
VSX2-201ENST00000261980 KCNJ4P48050 445 aa20.04■□□□□ 0.8
VSX2-201ENST00000261980 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
VSX2-201ENST00000261980 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
VSX2-201ENST00000261980 CWC22Q9HCG8 908 aaKnown RBP20.04■□□□□ 0.8
VSX2-201ENST00000261980 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms